RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 MACF1Q9UPN3 7388 aaKnown RBP8.62□□□□□ -1.03
TRADD-203ENST00000563348 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
TRADD-203ENST00000563348 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
TRADD-203ENST00000563348 KLKP1Q107X0 134 aa8.56□□□□□ -1.04
TRADD-203ENST00000563348 LINC00208Q96KT6 92 aa8.56□□□□□ -1.04
TRADD-203ENST00000563348 OCR1Q9BZK8 76 aa8.56□□□□□ -1.04
TRADD-203ENST00000563348 J3QR89 54 aa8.55□□□□□ -1.04
TRADD-203ENST00000563348 MP68P56378 58 aa8.52□□□□□ -1.05
TRADD-203ENST00000563348 KRTAP19-8Q3LI54 63 aa8.52□□□□□ -1.05
TRADD-203ENST00000563348 A8MUN3 132 aa8.51□□□□□ -1.05
TRADD-203ENST00000563348 MT1BP07438 61 aa8.51□□□□□ -1.05
TRADD-203ENST00000563348 NDUFC1O43677 76 aa8.5□□□□□ -1.05
TRADD-203ENST00000563348 Q5VV11 94 aa8.5□□□□□ -1.05
TRADD-203ENST00000563348 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
TRADD-203ENST00000563348 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
TRADD-203ENST00000563348 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
TRADD-203ENST00000563348 H0YAA0 97 aa8.43□□□□□ -1.06
TRADD-203ENST00000563348 H3BPC8 53 aa8.41□□□□□ -1.06
TRADD-203ENST00000563348 A6NN06 94 aa8.39□□□□□ -1.07
TRADD-203ENST00000563348 KRTAP6-3Q3LI67 103 aa8.33□□□□□ -1.08
TRADD-203ENST00000563348 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
TRADD-203ENST00000563348 KRTAP10-5P60370 271 aa8.31□□□□□ -1.08
TRADD-203ENST00000563348 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
TRADD-203ENST00000563348 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
TRADD-203ENST00000563348 TRAV7A0A075B6U4 112 aa8.17□□□□□ -1.1
TRADD-203ENST00000563348 SMIM20Q8N5G0 67 aa8.17□□□□□ -1.1
TRADD-203ENST00000563348 P0C880 135 aa8.14□□□□□ -1.11
TRADD-203ENST00000563348 C20orf197Q8N268 126 aa8.13□□□□□ -1.11
TRADD-203ENST00000563348 ACYP2P14621 99 aa8.1□□□□□ -1.11
TRADD-203ENST00000563348 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
TRADD-203ENST00000563348 R4GN34 69 aa8.1□□□□□ -1.11
TRADD-203ENST00000563348 NEBP20929 6669 aa8.06□□□□□ -1.12
TRADD-203ENST00000563348 SVIPQ8NHG7 77 aa8.05□□□□□ -1.12
TRADD-203ENST00000563348 PLAC4Q8WY50 150 aa8.05□□□□□ -1.12
TRADD-203ENST00000563348 M0QZ58 72 aa8.04□□□□□ -1.12
TRADD-203ENST00000563348 ANAPC13Q9BS18 74 aa8.04□□□□□ -1.12
TRADD-203ENST00000563348 MUC12Q9UKN1 5478 aa8.02□□□□□ -1.13
TRADD-203ENST00000563348 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
TRADD-203ENST00000563348 MT1XP80297 61 aa7.99□□□□□ -1.13
TRADD-203ENST00000563348 SPTSSBQ8NFR3 76 aa7.98□□□□□ -1.13
TRADD-203ENST00000563348 SNURFQ9Y675 71 aa7.98□□□□□ -1.13
TRADD-203ENST00000563348 KRTAP5-9P26371 169 aa7.96□□□□□ -1.14
TRADD-203ENST00000563348 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
TRADD-203ENST00000563348 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
TRADD-203ENST00000563348 KMT2DO14686 5537 aa7.92□□□□□ -1.14
TRADD-203ENST00000563348 SERP2Q8N6R1 65 aa7.9□□□□□ -1.14
TRADD-203ENST00000563348 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
TRADD-203ENST00000563348 CCDC179H3BU77 68 aa7.87□□□□□ -1.15
TRADD-203ENST00000563348 MDN1Q9NU22 5596 aa7.83□□□□□ -1.16
TRADD-203ENST00000563348 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
TRADD-203ENST00000563348 COX7CP15954 63 aa7.72□□□□□ -1.17
TRADD-203ENST00000563348 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
TRADD-203ENST00000563348 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.18
TRADD-203ENST00000563348 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
TRADD-203ENST00000563348 KRTAP20-1Q3LI63 56 aa7.66□□□□□ -1.18
TRADD-203ENST00000563348 COA5Q86WW8 74 aa7.65□□□□□ -1.18
TRADD-203ENST00000563348 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
TRADD-203ENST00000563348 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
TRADD-203ENST00000563348 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
TRADD-203ENST00000563348 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
TRADD-203ENST00000563348 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
TRADD-203ENST00000563348 TMEM258P61165 79 aa7.59□□□□□ -1.19
TRADD-203ENST00000563348 SPRR2EP22531 72 aa7.58□□□□□ -1.2
TRADD-203ENST00000563348 SPRR2BP35325 72 aa7.58□□□□□ -1.2
TRADD-203ENST00000563348 SPRR2AP35326 72 aa7.58□□□□□ -1.2
TRADD-203ENST00000563348 H7BZZ5 65 aa7.54□□□□□ -1.2
TRADD-203ENST00000563348 SEC61GP60059 68 aa7.52□□□□□ -1.21
TRADD-203ENST00000563348 CYSTM1Q9H1C7 97 aa7.52□□□□□ -1.21
TRADD-203ENST00000563348 KRTAP2-3P0C7H8 128 aa7.51□□□□□ -1.21
TRADD-203ENST00000563348 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
TRADD-203ENST00000563348 KRTAP2-4Q9BYR9 128 aa7.51□□□□□ -1.21
TRADD-203ENST00000563348 SERP1Q9Y6X1 66 aa7.51□□□□□ -1.21
TRADD-203ENST00000563348 CAMK2N1Q7Z7J9 78 aa7.46□□□□□ -1.22
TRADD-203ENST00000563348 A0A1B0GU33 70 aa7.4□□□□□ -1.22
TRADD-203ENST00000563348 A0A0D9SG42 100 aa7.39□□□□□ -1.23
TRADD-203ENST00000563348 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
TRADD-203ENST00000563348 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
TRADD-203ENST00000563348 SPRR2DP22532 72 aa7.33□□□□□ -1.24
TRADD-203ENST00000563348 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
TRADD-203ENST00000563348 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
TRADD-203ENST00000563348 KRTAP2-2Q9BYT5 123 aa7.27□□□□□ -1.25
TRADD-203ENST00000563348 KRTAP2-1Q9BYU5 128 aa7.27□□□□□ -1.25
TRADD-203ENST00000563348 A0A1B0GU69 56 aa7.26□□□□□ -1.25
TRADD-203ENST00000563348 KRTAP12-1P59990 96 aa7.25□□□□□ -1.25
TRADD-203ENST00000563348 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
TRADD-203ENST00000563348 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
TRADD-203ENST00000563348 PRO0628Q9UI54 55 aa7.14□□□□□ -1.27
TRADD-203ENST00000563348 A8MU10 97 aa7.11□□□□□ -1.27
TRADD-203ENST00000563348 MT1EP04732 61 aa7.08□□□□□ -1.28
TRADD-203ENST00000563348 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
TRADD-203ENST00000563348 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
TRADD-203ENST00000563348 LINC01558Q9Y6Z2 57 aa7.02□□□□□ -1.29
TRADD-203ENST00000563348 KRTAP19-3Q7Z4W3 81 aa7.01□□□□□ -1.29
TRADD-203ENST00000563348 Q1T7F1 81 aa6.98□□□□□ -1.29
TRADD-203ENST00000563348 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
TRADD-203ENST00000563348 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
TRADD-203ENST00000563348 V9GYY9 64 aa6.93□□□□□ -1.3
TRADD-203ENST00000563348 DSTQ03001 7570 aaKnown RBP6.93□□□□□ -1.3
TRADD-203ENST00000563348 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
TRADD-203ENST00000563348 TNP1P09430 55 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms