RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 COX6B2Q6YFQ2 88 aa3.14□□□□□ -1.91
CNOT1-204ENST00000563130 J3QR89 54 aa3.14□□□□□ -1.91
CNOT1-204ENST00000563130 SPINK7P58062 85 aa3.12□□□□□ -1.91
CNOT1-204ENST00000563130 CASC2Q6XLA1 102 aa3.12□□□□□ -1.91
CNOT1-204ENST00000563130 WFDC13Q8IUB5 93 aa3.12□□□□□ -1.91
CNOT1-204ENST00000563130 ACYP1P07311 99 aa3.12□□□□□ -1.91
CNOT1-204ENST00000563130 HCG22E2RYF7 251 aa3.1□□□□□ -1.91
CNOT1-204ENST00000563130 Q5W150 140 aa3.1□□□□□ -1.91
CNOT1-204ENST00000563130 A8MUN3 132 aa3.1□□□□□ -1.91
CNOT1-204ENST00000563130 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
CNOT1-204ENST00000563130 M0R2T5 61 aa3.08□□□□□ -1.92
CNOT1-204ENST00000563130 ATP5EP2Q5VTU8 51 aa3.07□□□□□ -1.92
CNOT1-204ENST00000563130 IMUPQ9GZP8 106 aa3.05□□□□□ -1.92
CNOT1-204ENST00000563130 C7orf65Q6ZTY9 151 aa3.05□□□□□ -1.92
CNOT1-204ENST00000563130 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
CNOT1-204ENST00000563130 LINC00643Q86TS7 51 aa3.05□□□□□ -1.92
CNOT1-204ENST00000563130 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
CNOT1-204ENST00000563130 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
CNOT1-204ENST00000563130 HIST1H4AP62805 103 aaKnown RBP3.02□□□□□ -1.93
CNOT1-204ENST00000563130 A0A087WVE0 104 aa3□□□□□ -1.93
CNOT1-204ENST00000563130 H1FX-AS1Q4G0G2 97 aa3□□□□□ -1.93
CNOT1-204ENST00000563130 LUZP6Q538Z0 58 aa3□□□□□ -1.93
CNOT1-204ENST00000563130 LCA10Q71F78 164 aa3□□□□□ -1.93
CNOT1-204ENST00000563130 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
CNOT1-204ENST00000563130 TRAV22A0A0B4J277 110 aa2.99□□□□□ -1.93
CNOT1-204ENST00000563130 MT2AP02795 61 aa2.99□□□□□ -1.93
CNOT1-204ENST00000563130 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
CNOT1-204ENST00000563130 CCDC179H3BU77 68 aa2.98□□□□□ -1.93
CNOT1-204ENST00000563130 UQCRQO14949 82 aa2.98□□□□□ -1.93
CNOT1-204ENST00000563130 MT3P25713 68 aa2.98□□□□□ -1.93
CNOT1-204ENST00000563130 CYP4F30PQ9H0H9 118 aa2.98□□□□□ -1.93
CNOT1-204ENST00000563130 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
CNOT1-204ENST00000563130 LOC101927531A0A1B0GV80 90 aa2.96□□□□□ -1.93
CNOT1-204ENST00000563130 MT1FP04733 61 aa2.96□□□□□ -1.93
CNOT1-204ENST00000563130 MT-ATP8P03928 68 aa2.96□□□□□ -1.94
CNOT1-204ENST00000563130 ATOX1O00244 68 aa2.95□□□□□ -1.94
CNOT1-204ENST00000563130 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
CNOT1-204ENST00000563130 C1orf64Q8NEQ6 169 aa2.95□□□□□ -1.94
CNOT1-204ENST00000563130 H0Y9P7 68 aa2.94□□□□□ -1.94
CNOT1-204ENST00000563130 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
CNOT1-204ENST00000563130 FAM236AA0A1B0GUQ0 79 aa2.93□□□□□ -1.94
CNOT1-204ENST00000563130 FAM236BA0A1B0GV22 79 aa2.93□□□□□ -1.94
CNOT1-204ENST00000563130 TMEM258P61165 79 aa2.93□□□□□ -1.94
CNOT1-204ENST00000563130 K7ERS5 55 aa2.93□□□□□ -1.94
CNOT1-204ENST00000563130 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
CNOT1-204ENST00000563130 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
CNOT1-204ENST00000563130 USH2AO75445 5202 aa2.92□□□□□ -1.94
CNOT1-204ENST00000563130 A6NED7 52 aa2.91□□□□□ -1.94
CNOT1-204ENST00000563130 LINC00208Q96KT6 92 aa2.91□□□□□ -1.94
CNOT1-204ENST00000563130 S4R3F8 94 aa2.9□□□□□ -1.94
CNOT1-204ENST00000563130 NDUFAF8A1L188 74 aa2.9□□□□□ -1.95
CNOT1-204ENST00000563130 H3BPC8 53 aa2.89□□□□□ -1.95
CNOT1-204ENST00000563130 KLKP1Q107X0 134 aa2.89□□□□□ -1.95
CNOT1-204ENST00000563130 CSAG1Q6PB30 78 aa2.88□□□□□ -1.95
CNOT1-204ENST00000563130 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
CNOT1-204ENST00000563130 COX7CP15954 63 aa2.87□□□□□ -1.95
CNOT1-204ENST00000563130 TRAV7A0A075B6U4 112 aa2.85□□□□□ -1.95
CNOT1-204ENST00000563130 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
CNOT1-204ENST00000563130 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
CNOT1-204ENST00000563130 NDUFC1O43677 76 aa2.82□□□□□ -1.96
CNOT1-204ENST00000563130 H0YAA0 97 aa2.81□□□□□ -1.96
CNOT1-204ENST00000563130 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
CNOT1-204ENST00000563130 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
CNOT1-204ENST00000563130 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
CNOT1-204ENST00000563130 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-204ENST00000563130 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
CNOT1-204ENST00000563130 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
CNOT1-204ENST00000563130 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
CNOT1-204ENST00000563130 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
CNOT1-204ENST00000563130 CRIPTQ9P021 101 aa2.77□□□□□ -1.97
CNOT1-204ENST00000563130 SNURFQ9Y675 71 aa2.77□□□□□ -1.97
CNOT1-204ENST00000563130 MT1BP07438 61 aa2.76□□□□□ -1.97
CNOT1-204ENST00000563130 C20orf197Q8N268 126 aa2.76□□□□□ -1.97
CNOT1-204ENST00000563130 ACYP2P14621 99 aa2.75□□□□□ -1.97
CNOT1-204ENST00000563130 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
CNOT1-204ENST00000563130 Q5VV11 94 aa2.72□□□□□ -1.97
CNOT1-204ENST00000563130 P0C880 135 aa2.71□□□□□ -1.98
CNOT1-204ENST00000563130 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
CNOT1-204ENST00000563130 A6NN06 94 aa2.7□□□□□ -1.98
CNOT1-204ENST00000563130 CYSTM1Q9H1C7 97 aa2.7□□□□□ -1.98
CNOT1-204ENST00000563130 ROMO1P60602 79 aa2.69□□□□□ -1.98
CNOT1-204ENST00000563130 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
CNOT1-204ENST00000563130 CHKB-CPT1BH3BT56 60 aa2.68□□□□□ -1.98
CNOT1-204ENST00000563130 H7BZZ5 65 aa2.68□□□□□ -1.98
CNOT1-204ENST00000563130 Q1T7F1 81 aa2.67□□□□□ -1.98
CNOT1-204ENST00000563130 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
CNOT1-204ENST00000563130 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
CNOT1-204ENST00000563130 R4GN34 69 aa2.67□□□□□ -1.98
CNOT1-204ENST00000563130 A0A1B0GU33 70 aa2.66□□□□□ -1.98
CNOT1-204ENST00000563130 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
CNOT1-204ENST00000563130 M0QZ58 72 aa2.65□□□□□ -1.99
CNOT1-204ENST00000563130 COA5Q86WW8 74 aa2.65□□□□□ -1.99
CNOT1-204ENST00000563130 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
CNOT1-204ENST00000563130 MT1XP80297 61 aa2.61□□□□□ -1.99
CNOT1-204ENST00000563130 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
CNOT1-204ENST00000563130 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
CNOT1-204ENST00000563130 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
CNOT1-204ENST00000563130 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
CNOT1-204ENST00000563130 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
CNOT1-204ENST00000563130 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms