RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 TMEM254Q8TBM7 123 aa2.91□□□□□ -1.94
CDH13-206ENST00000562601 UBL5Q9BZL1 73 aa2.9□□□□□ -1.95
CDH13-206ENST00000562601 RBM12B-AS1Q9P1G2 102 aa2.9□□□□□ -1.95
CDH13-206ENST00000562601 CASC2Q6XLA1 102 aa2.89□□□□□ -1.95
CDH13-206ENST00000562601 HCG22E2RYF7 251 aa2.88□□□□□ -1.95
CDH13-206ENST00000562601 Q5W150 140 aa2.88□□□□□ -1.95
CDH13-206ENST00000562601 V9GYY9 64 aa2.88□□□□□ -1.95
CDH13-206ENST00000562601 A0A1B0GV90 55 aa2.87□□□□□ -1.95
CDH13-206ENST00000562601 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
CDH13-206ENST00000562601 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
CDH13-206ENST00000562601 CXCL6P80162 114 aa2.85□□□□□ -1.95
CDH13-206ENST00000562601 USH2AO75445 5202 aa2.85□□□□□ -1.95
CDH13-206ENST00000562601 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
CDH13-206ENST00000562601 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
CDH13-206ENST00000562601 MT2AP02795 61 aa2.81□□□□□ -1.96
CDH13-206ENST00000562601 ACYP1P07311 99 aa2.81□□□□□ -1.96
CDH13-206ENST00000562601 C5orf47Q569G3 176 aa2.81□□□□□ -1.96
CDH13-206ENST00000562601 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
CDH13-206ENST00000562601 MT1FP04733 61 aa2.8□□□□□ -1.96
CDH13-206ENST00000562601 HIST1H4AP62805 103 aaKnown RBP2.8□□□□□ -1.96
CDH13-206ENST00000562601 C4orf26Q17RF5 130 aa2.8□□□□□ -1.96
CDH13-206ENST00000562601 H1FX-AS1Q4G0G2 97 aa2.8□□□□□ -1.96
CDH13-206ENST00000562601 CRCT1Q9UGL9 99 aa2.8□□□□□ -1.96
CDH13-206ENST00000562601 FAM240AA0A1B0GVK7 77 aa2.79□□□□□ -1.96
CDH13-206ENST00000562601 KRTAP10-10P60014 251 aa2.79□□□□□ -1.96
CDH13-206ENST00000562601 A0A087WVE0 104 aa2.78□□□□□ -1.96
CDH13-206ENST00000562601 TP53AIP1Q9HCN2 124 aa2.78□□□□□ -1.96
CDH13-206ENST00000562601 ATP5EP2Q5VTU8 51 aa2.77□□□□□ -1.97
CDH13-206ENST00000562601 CAMK2N1Q7Z7J9 78 aa2.76□□□□□ -1.97
CDH13-206ENST00000562601 LINC00643Q86TS7 51 aa2.76□□□□□ -1.97
CDH13-206ENST00000562601 C1orf64Q8NEQ6 169 aa2.75□□□□□ -1.97
CDH13-206ENST00000562601 TRAV22A0A0B4J277 110 aa2.74□□□□□ -1.97
CDH13-206ENST00000562601 CYP4F30PQ9H0H9 118 aa2.74□□□□□ -1.97
CDH13-206ENST00000562601 H0Y9P7 68 aa2.73□□□□□ -1.97
CDH13-206ENST00000562601 S4R3F8 94 aa2.73□□□□□ -1.97
CDH13-206ENST00000562601 A8MU10 97 aa2.72□□□□□ -1.97
CDH13-206ENST00000562601 UQCRQO14949 82 aa2.72□□□□□ -1.97
CDH13-206ENST00000562601 LOC101927531A0A1B0GV80 90 aa2.71□□□□□ -1.98
CDH13-206ENST00000562601 J3QR89 54 aa2.71□□□□□ -1.98
CDH13-206ENST00000562601 LCA10Q71F78 164 aa2.71□□□□□ -1.98
CDH13-206ENST00000562601 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
CDH13-206ENST00000562601 ATOX1O00244 68 aa2.69□□□□□ -1.98
CDH13-206ENST00000562601 PSPHP1O15172 72 aa2.69□□□□□ -1.98
CDH13-206ENST00000562601 KLKP1Q107X0 134 aa2.69□□□□□ -1.98
CDH13-206ENST00000562601 FAM236AA0A1B0GUQ0 79 aa2.68□□□□□ -1.98
CDH13-206ENST00000562601 FAM236BA0A1B0GV22 79 aa2.68□□□□□ -1.98
CDH13-206ENST00000562601 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
CDH13-206ENST00000562601 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
CDH13-206ENST00000562601 MT-ATP8P03928 68 aa2.67□□□□□ -1.98
CDH13-206ENST00000562601 SCGB1A1P11684 91 aa2.67□□□□□ -1.98
CDH13-206ENST00000562601 MP68P56378 58 aa2.67□□□□□ -1.98
CDH13-206ENST00000562601 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
CDH13-206ENST00000562601 SMIM26A0A096LP01 95 aa2.65□□□□□ -1.99
CDH13-206ENST00000562601 K7ERU9 68 aa2.65□□□□□ -1.99
CDH13-206ENST00000562601 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
CDH13-206ENST00000562601 NDUFC1O43677 76 aa2.61□□□□□ -1.99
CDH13-206ENST00000562601 IMUPQ9GZP8 106 aa2.61□□□□□ -1.99
CDH13-206ENST00000562601 A8MUN3 132 aa2.6□□□□□ -1.99
CDH13-206ENST00000562601 H3BPC8 53 aa2.6□□□□□ -1.99
CDH13-206ENST00000562601 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
CDH13-206ENST00000562601 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
CDH13-206ENST00000562601 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
CDH13-206ENST00000562601 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
CDH13-206ENST00000562601 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
CDH13-206ENST00000562601 TRAV7A0A075B6U4 112 aa2.58□□□□□ -2
CDH13-206ENST00000562601 MT1BP07438 61 aa2.57□□□□□ -2
CDH13-206ENST00000562601 Q5VV11 94 aa2.57□□□□□ -2
CDH13-206ENST00000562601 SMIM20Q8N5G0 67 aa2.57□□□□□ -2
CDH13-206ENST00000562601 DMAC1Q96GE9 116 aa2.57□□□□□ -2
CDH13-206ENST00000562601 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
CDH13-206ENST00000562601 SNURFQ9Y675 71 aa2.57□□□□□ -2
CDH13-206ENST00000562601 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
CDH13-206ENST00000562601 H0YAA0 97 aa2.55□□□□□ -2
CDH13-206ENST00000562601 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
CDH13-206ENST00000562601 CRIPTQ9P021 101 aa2.54□□□□□ -2
CDH13-206ENST00000562601 P0C880 135 aa2.53□□□□□ -2
CDH13-206ENST00000562601 ACYP2P14621 99 aa2.53□□□□□ -2
CDH13-206ENST00000562601 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CDH13-206ENST00000562601 C20orf197Q8N268 126 aa2.53□□□□□ -2
CDH13-206ENST00000562601 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
CDH13-206ENST00000562601 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
CDH13-206ENST00000562601 A6NN06 94 aa2.52□□□□□ -2.01
CDH13-206ENST00000562601 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
CDH13-206ENST00000562601 CHKB-CPT1BH3BT56 60 aa2.49□□□□□ -2.01
CDH13-206ENST00000562601 M0QZ58 72 aa2.49□□□□□ -2.01
CDH13-206ENST00000562601 R4GN34 69 aa2.49□□□□□ -2.01
CDH13-206ENST00000562601 LINC01554Q52M75 96 aa2.47□□□□□ -2.01
CDH13-206ENST00000562601 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
CDH13-206ENST00000562601 SPTSSBQ8NFR3 76 aa2.47□□□□□ -2.01
CDH13-206ENST00000562601 SPANXA2-OT1Q8N9U9 137 aa2.46□□□□□ -2.02
CDH13-206ENST00000562601 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
CDH13-206ENST00000562601 K7ERS5 55 aa2.45□□□□□ -2.02
CDH13-206ENST00000562601 COX7CP15954 63 aa2.45□□□□□ -2.02
CDH13-206ENST00000562601 CYSTM1Q9H1C7 97 aa2.45□□□□□ -2.02
CDH13-206ENST00000562601 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CDH13-206ENST00000562601 MT1XP80297 61 aa2.43□□□□□ -2.02
CDH13-206ENST00000562601 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
CDH13-206ENST00000562601 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
CDH13-206ENST00000562601 COA5Q86WW8 74 aa2.43□□□□□ -2.02
CDH13-206ENST00000562601 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms