RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 A6NED7 52 aa6.74□□□□□ -1.33
PCAT1-202ENST00000561978 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
PCAT1-202ENST00000561978 HERC1Q15751 4861 aa6.74□□□□□ -1.33
PCAT1-202ENST00000561978 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
PCAT1-202ENST00000561978 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
PCAT1-202ENST00000561978 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
PCAT1-202ENST00000561978 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
PCAT1-202ENST00000561978 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.34
PCAT1-202ENST00000561978 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
PCAT1-202ENST00000561978 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
PCAT1-202ENST00000561978 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
PCAT1-202ENST00000561978 PRR15LQ9BU68 103 aa6.69□□□□□ -1.34
PCAT1-202ENST00000561978 TNXBP22105 4242 aa6.68□□□□□ -1.34
PCAT1-202ENST00000561978 TYMSOSQ8TAI1 123 aa6.67□□□□□ -1.34
PCAT1-202ENST00000561978 SPINK1P00995 79 aa6.66□□□□□ -1.34
PCAT1-202ENST00000561978 PRR4Q16378 134 aa6.64□□□□□ -1.35
PCAT1-202ENST00000561978 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
PCAT1-202ENST00000561978 SPAG11AQ6PDA7 123 aa6.62□□□□□ -1.35
PCAT1-202ENST00000561978 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
PCAT1-202ENST00000561978 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
PCAT1-202ENST00000561978 PCOTHQ58A44 107 aa6.58□□□□□ -1.36
PCAT1-202ENST00000561978 LINC00304Q8N9R0 145 aa6.58□□□□□ -1.36
PCAT1-202ENST00000561978 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
PCAT1-202ENST00000561978 ROMO1P60602 79 aa6.56□□□□□ -1.36
PCAT1-202ENST00000561978 Q5W150 140 aa6.56□□□□□ -1.36
PCAT1-202ENST00000561978 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
PCAT1-202ENST00000561978 KRTAP10-8P60410 259 aa6.54□□□□□ -1.36
PCAT1-202ENST00000561978 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
PCAT1-202ENST00000561978 COA5Q86WW8 74 aa6.51□□□□□ -1.37
PCAT1-202ENST00000561978 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
PCAT1-202ENST00000561978 HMCN2Q8NDA2 5059 aa6.48□□□□□ -1.37
PCAT1-202ENST00000561978 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
PCAT1-202ENST00000561978 ACYP2P14621 99 aa6.44□□□□□ -1.38
PCAT1-202ENST00000561978 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
PCAT1-202ENST00000561978 HRES1P13985 223 aa6.43□□□□□ -1.38
PCAT1-202ENST00000561978 LRP2P98164 4655 aa6.41□□□□□ -1.38
PCAT1-202ENST00000561978 DMAC1Q96GE9 116 aa6.4□□□□□ -1.39
PCAT1-202ENST00000561978 SPINK7P58062 85 aa6.39□□□□□ -1.39
PCAT1-202ENST00000561978 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
PCAT1-202ENST00000561978 LPAP08519 4548 aa6.38□□□□□ -1.39
PCAT1-202ENST00000561978 IGKV2D-30A0A075B6S6 120 aa6.38□□□□□ -1.39
PCAT1-202ENST00000561978 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
PCAT1-202ENST00000561978 A8MUU9 505 aa6.35□□□□□ -1.39
PCAT1-202ENST00000561978 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
PCAT1-202ENST00000561978 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
PCAT1-202ENST00000561978 P0C880 135 aa6.33□□□□□ -1.4
PCAT1-202ENST00000561978 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
PCAT1-202ENST00000561978 LUZP6Q538Z0 58 aa6.29□□□□□ -1.4
PCAT1-202ENST00000561978 K7ERS5 55 aa6.26□□□□□ -1.41
PCAT1-202ENST00000561978 RNF213Q63HN8 5207 aa6.24□□□□□ -1.41
PCAT1-202ENST00000561978 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
PCAT1-202ENST00000561978 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
PCAT1-202ENST00000561978 MUC2Q02817 5179 aa6.19□□□□□ -1.42
PCAT1-202ENST00000561978 A0A1B0GU69 56 aa6.17□□□□□ -1.42
PCAT1-202ENST00000561978 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
PCAT1-202ENST00000561978 UQCR11O14957 56 aa6.13□□□□□ -1.43
PCAT1-202ENST00000561978 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
PCAT1-202ENST00000561978 NDUFAF8A1L188 74 aa6.11□□□□□ -1.43
PCAT1-202ENST00000561978 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
PCAT1-202ENST00000561978 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
PCAT1-202ENST00000561978 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
PCAT1-202ENST00000561978 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
PCAT1-202ENST00000561978 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
PCAT1-202ENST00000561978 FAT4Q6V0I7 4981 aa5.92□□□□□ -1.46
PCAT1-202ENST00000561978 A0A1B0GU33 70 aa5.89□□□□□ -1.47
PCAT1-202ENST00000561978 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
PCAT1-202ENST00000561978 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
PCAT1-202ENST00000561978 S4R3F8 94 aa5.88□□□□□ -1.47
PCAT1-202ENST00000561978 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
PCAT1-202ENST00000561978 H0YAA0 97 aa5.8□□□□□ -1.48
PCAT1-202ENST00000561978 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
PCAT1-202ENST00000561978 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
PCAT1-202ENST00000561978 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
PCAT1-202ENST00000561978 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
PCAT1-202ENST00000561978 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
PCAT1-202ENST00000561978 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
PCAT1-202ENST00000561978 MT1HP80294 61 aa5.6□□□□□ -1.51
PCAT1-202ENST00000561978 M0QZ58 72 aa5.58□□□□□ -1.52
PCAT1-202ENST00000561978 A0A0D9SG42 100 aa5.56□□□□□ -1.52
PCAT1-202ENST00000561978 M0R2T5 61 aa5.53□□□□□ -1.52
PCAT1-202ENST00000561978 CRIPTQ9P021 101 aa5.51□□□□□ -1.53
PCAT1-202ENST00000561978 R4GN34 69 aa5.46□□□□□ -1.54
PCAT1-202ENST00000561978 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
PCAT1-202ENST00000561978 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
PCAT1-202ENST00000561978 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
PCAT1-202ENST00000561978 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
PCAT1-202ENST00000561978 MT2AP02795 61 aa5.27□□□□□ -1.57
PCAT1-202ENST00000561978 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
PCAT1-202ENST00000561978 MT1FP04733 61 aa5.24□□□□□ -1.57
PCAT1-202ENST00000561978 KRTAP10-10P60014 251 aa5.22□□□□□ -1.57
PCAT1-202ENST00000561978 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
PCAT1-202ENST00000561978 USH2AO75445 5202 aa5.21□□□□□ -1.58
PCAT1-202ENST00000561978 INE1O15225 51 aa5.11□□□□□ -1.59
PCAT1-202ENST00000561978 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
PCAT1-202ENST00000561978 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
PCAT1-202ENST00000561978 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
PCAT1-202ENST00000561978 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
PCAT1-202ENST00000561978 PP632Q6XCG6 107 aa5□□□□□ -1.61
PCAT1-202ENST00000561978 TNP1P09430 55 aa4.96□□□□□ -1.62
PCAT1-202ENST00000561978 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms