RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 UBL5Q9BZL1 73 aa4.8□□□□□ -1.64
CLK3-205ENST00000561673 J3QR89 54 aa4.78□□□□□ -1.64
CLK3-205ENST00000561673 K7ERU9 68 aa4.78□□□□□ -1.64
CLK3-205ENST00000561673 ETDBQ3ZM63 59 aa4.78□□□□□ -1.64
CLK3-205ENST00000561673 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
CLK3-205ENST00000561673 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
CLK3-205ENST00000561673 C5orf47Q569G3 176 aa4.74□□□□□ -1.65
CLK3-205ENST00000561673 C1orf64Q8NEQ6 169 aa4.72□□□□□ -1.65
CLK3-205ENST00000561673 S4R3F8 94 aa4.71□□□□□ -1.66
CLK3-205ENST00000561673 TP53AIP1Q9HCN2 124 aa4.7□□□□□ -1.66
CLK3-205ENST00000561673 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
CLK3-205ENST00000561673 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
CLK3-205ENST00000561673 LCA10Q71F78 164 aa4.69□□□□□ -1.66
CLK3-205ENST00000561673 CSAG1Q6PB30 78 aa4.68□□□□□ -1.66
CLK3-205ENST00000561673 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
CLK3-205ENST00000561673 ACYP1P07311 99 aa4.65□□□□□ -1.67
CLK3-205ENST00000561673 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
CLK3-205ENST00000561673 MT1BP07438 61 aa4.63□□□□□ -1.67
CLK3-205ENST00000561673 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
CLK3-205ENST00000561673 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
CLK3-205ENST00000561673 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
CLK3-205ENST00000561673 Q5VV11 94 aa4.61□□□□□ -1.67
CLK3-205ENST00000561673 A0A087WVE0 104 aa4.59□□□□□ -1.67
CLK3-205ENST00000561673 TRAV22A0A0B4J277 110 aa4.59□□□□□ -1.67
CLK3-205ENST00000561673 A6NN06 94 aa4.59□□□□□ -1.67
CLK3-205ENST00000561673 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
CLK3-205ENST00000561673 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
CLK3-205ENST00000561673 LINC00643Q86TS7 51 aa4.56□□□□□ -1.68
CLK3-205ENST00000561673 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
CLK3-205ENST00000561673 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
CLK3-205ENST00000561673 HIST1H4AP62805 103 aaKnown RBP4.54□□□□□ -1.68
CLK3-205ENST00000561673 ATP5EP2Q5VTU8 51 aa4.54□□□□□ -1.68
CLK3-205ENST00000561673 UQCRQO14949 82 aa4.53□□□□□ -1.68
CLK3-205ENST00000561673 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
CLK3-205ENST00000561673 H0Y9P7 68 aa4.52□□□□□ -1.69
CLK3-205ENST00000561673 ATOX1O00244 68 aa4.51□□□□□ -1.69
CLK3-205ENST00000561673 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
CLK3-205ENST00000561673 NEBP20929 6669 aa4.51□□□□□ -1.69
CLK3-205ENST00000561673 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
CLK3-205ENST00000561673 IMUPQ9GZP8 106 aa4.5□□□□□ -1.69
CLK3-205ENST00000561673 NDUFC1O43677 76 aa4.49□□□□□ -1.69
CLK3-205ENST00000561673 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
CLK3-205ENST00000561673 H0YAA0 97 aa4.47□□□□□ -1.69
CLK3-205ENST00000561673 A8MUN3 132 aa4.45□□□□□ -1.7
CLK3-205ENST00000561673 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
CLK3-205ENST00000561673 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
CLK3-205ENST00000561673 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
CLK3-205ENST00000561673 KMT2DO14686 5537 aa4.42□□□□□ -1.7
CLK3-205ENST00000561673 OCR1Q9BZK8 76 aa4.41□□□□□ -1.7
CLK3-205ENST00000561673 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
CLK3-205ENST00000561673 MP68P56378 58 aa4.4□□□□□ -1.71
CLK3-205ENST00000561673 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
CLK3-205ENST00000561673 SMIM20Q8N5G0 67 aa4.35□□□□□ -1.71
CLK3-205ENST00000561673 P0C880 135 aa4.33□□□□□ -1.72
CLK3-205ENST00000561673 MT1XP80297 61 aa4.33□□□□□ -1.72
CLK3-205ENST00000561673 H3BPC8 53 aa4.32□□□□□ -1.72
CLK3-205ENST00000561673 SERP2Q8N6R1 65 aa4.32□□□□□ -1.72
CLK3-205ENST00000561673 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
CLK3-205ENST00000561673 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
CLK3-205ENST00000561673 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
CLK3-205ENST00000561673 DMAC1Q96GE9 116 aa4.31□□□□□ -1.72
CLK3-205ENST00000561673 R4GN34 69 aa4.31□□□□□ -1.72
CLK3-205ENST00000561673 TRAV7A0A075B6U4 112 aa4.3□□□□□ -1.72
CLK3-205ENST00000561673 COX7CP15954 63 aa4.29□□□□□ -1.72
CLK3-205ENST00000561673 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
CLK3-205ENST00000561673 M0QZ58 72 aa4.27□□□□□ -1.73
CLK3-205ENST00000561673 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
CLK3-205ENST00000561673 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
CLK3-205ENST00000561673 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
CLK3-205ENST00000561673 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
CLK3-205ENST00000561673 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
CLK3-205ENST00000561673 ACYP2P14621 99 aa4.2□□□□□ -1.74
CLK3-205ENST00000561673 SPRR2EP22531 72 aa4.2□□□□□ -1.74
CLK3-205ENST00000561673 SPRR2BP35325 72 aa4.2□□□□□ -1.74
CLK3-205ENST00000561673 SPRR2AP35326 72 aa4.2□□□□□ -1.74
CLK3-205ENST00000561673 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
CLK3-205ENST00000561673 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
CLK3-205ENST00000561673 SNURFQ9Y675 71 aa4.18□□□□□ -1.74
CLK3-205ENST00000561673 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CLK3-205ENST00000561673 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
CLK3-205ENST00000561673 TMEM258P61165 79 aa4.14□□□□□ -1.75
CLK3-205ENST00000561673 SPTSSBQ8NFR3 76 aa4.14□□□□□ -1.75
CLK3-205ENST00000561673 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
CLK3-205ENST00000561673 H7BZZ5 65 aa4.12□□□□□ -1.75
CLK3-205ENST00000561673 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
CLK3-205ENST00000561673 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
CLK3-205ENST00000561673 ATP5EP56381 51 aaPredicted RBP4.1□□□□□ -1.75
CLK3-205ENST00000561673 SPRR2DP22532 72 aa4.06□□□□□ -1.76
CLK3-205ENST00000561673 SEC61GP60059 68 aa4.06□□□□□ -1.76
CLK3-205ENST00000561673 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
CLK3-205ENST00000561673 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
CLK3-205ENST00000561673 SPANXA2-OT1Q8N9U9 137 aa4.05□□□□□ -1.76
CLK3-205ENST00000561673 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CLK3-205ENST00000561673 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
CLK3-205ENST00000561673 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
CLK3-205ENST00000561673 RPS28P62857 69 aaKnown RBP3.99□□□□□ -1.77
CLK3-205ENST00000561673 CAMK2N1Q7Z7J9 78 aa3.95□□□□□ -1.78
CLK3-205ENST00000561673 COA5Q86WW8 74 aa3.94□□□□□ -1.78
CLK3-205ENST00000561673 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
CLK3-205ENST00000561673 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms