RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ST20-AS1Q8NBB2 130 aa4.66□□□□□ -1.66
PALB2-202ENST00000561514 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.67
PALB2-202ENST00000561514 DSCR10P59022 87 aa4.64□□□□□ -1.67
PALB2-202ENST00000561514 Q6ZRX8 168 aa4.63□□□□□ -1.67
PALB2-202ENST00000561514 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
PALB2-202ENST00000561514 DHRS4-AS1Q9P1J3 65 aa4.62□□□□□ -1.67
PALB2-202ENST00000561514 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
PALB2-202ENST00000561514 SPINK7P58062 85 aa4.61□□□□□ -1.67
PALB2-202ENST00000561514 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
PALB2-202ENST00000561514 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
PALB2-202ENST00000561514 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
PALB2-202ENST00000561514 IGLV9-49A0A0B4J1Y8 123 aa4.6□□□□□ -1.67
PALB2-202ENST00000561514 K7EQZ3 153 aa4.6□□□□□ -1.67
PALB2-202ENST00000561514 MT1HP80294 61 aa4.59□□□□□ -1.67
PALB2-202ENST00000561514 SPRR1BP22528 89 aa4.58□□□□□ -1.68
PALB2-202ENST00000561514 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
PALB2-202ENST00000561514 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
PALB2-202ENST00000561514 ROMO1P60602 79 aa4.57□□□□□ -1.68
PALB2-202ENST00000561514 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
PALB2-202ENST00000561514 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
PALB2-202ENST00000561514 UQCR11O14957 56 aa4.54□□□□□ -1.68
PALB2-202ENST00000561514 PCOTHQ58A44 107 aa4.54□□□□□ -1.68
PALB2-202ENST00000561514 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
PALB2-202ENST00000561514 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
PALB2-202ENST00000561514 A8MWP4 228 aa4.53□□□□□ -1.68
PALB2-202ENST00000561514 KRTAP10-6P60371 365 aaPredicted RBP4.53□□□□□ -1.68
PALB2-202ENST00000561514 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
PALB2-202ENST00000561514 IGLV8-61A0A075B6I0 122 aa4.52□□□□□ -1.69
PALB2-202ENST00000561514 MIR22HGQ0VDD5 57 aa4.51□□□□□ -1.69
PALB2-202ENST00000561514 WFDC13Q8IUB5 93 aa4.51□□□□□ -1.69
PALB2-202ENST00000561514 A0A087WSZ3 146 aa4.5□□□□□ -1.69
PALB2-202ENST00000561514 KRTAP9-7A8MTY7 169 aa4.5□□□□□ -1.69
PALB2-202ENST00000561514 ADM2Q7Z4H4 148 aa4.5□□□□□ -1.69
PALB2-202ENST00000561514 A0A1B0GU69 56 aa4.49□□□□□ -1.69
PALB2-202ENST00000561514 HRES1P13985 223 aa4.49□□□□□ -1.69
PALB2-202ENST00000561514 ACYP2P14621 99 aa4.49□□□□□ -1.69
PALB2-202ENST00000561514 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
PALB2-202ENST00000561514 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
PALB2-202ENST00000561514 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
PALB2-202ENST00000561514 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
PALB2-202ENST00000561514 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
PALB2-202ENST00000561514 DEFB105AQ8NG35 78 aa4.43□□□□□ -1.7
PALB2-202ENST00000561514 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
PALB2-202ENST00000561514 USH2AO75445 5202 aa4.43□□□□□ -1.7
PALB2-202ENST00000561514 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
PALB2-202ENST00000561514 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
PALB2-202ENST00000561514 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.71
PALB2-202ENST00000561514 M0R2T5 61 aa4.4□□□□□ -1.71
PALB2-202ENST00000561514 A0A0G2JQZ4 141 aa4.39□□□□□ -1.71
PALB2-202ENST00000561514 COX6B2Q6YFQ2 88 aa4.39□□□□□ -1.71
PALB2-202ENST00000561514 IGFL1Q6UW32 110 aa4.38□□□□□ -1.71
PALB2-202ENST00000561514 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
PALB2-202ENST00000561514 K7ERS5 55 aa4.37□□□□□ -1.71
PALB2-202ENST00000561514 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
PALB2-202ENST00000561514 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
PALB2-202ENST00000561514 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
PALB2-202ENST00000561514 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
PALB2-202ENST00000561514 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
PALB2-202ENST00000561514 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
PALB2-202ENST00000561514 A8MUU9 505 aa4.31□□□□□ -1.72
PALB2-202ENST00000561514 C8orf17Q9NRJ1 99 aa4.31□□□□□ -1.72
PALB2-202ENST00000561514 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
PALB2-202ENST00000561514 P0C880 135 aa4.28□□□□□ -1.72
PALB2-202ENST00000561514 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
PALB2-202ENST00000561514 A0A1B0GVX0 72 aa4.27□□□□□ -1.73
PALB2-202ENST00000561514 Q5W150 140 aa4.26□□□□□ -1.73
PALB2-202ENST00000561514 MT2AP02795 61 aa4.25□□□□□ -1.73
PALB2-202ENST00000561514 Q96NJ1 140 aa4.24□□□□□ -1.73
PALB2-202ENST00000561514 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
PALB2-202ENST00000561514 MT1FP04733 61 aa4.21□□□□□ -1.74
PALB2-202ENST00000561514 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
PALB2-202ENST00000561514 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
PALB2-202ENST00000561514 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
PALB2-202ENST00000561514 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
PALB2-202ENST00000561514 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
PALB2-202ENST00000561514 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
PALB2-202ENST00000561514 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
PALB2-202ENST00000561514 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
PALB2-202ENST00000561514 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
PALB2-202ENST00000561514 KRTAP10-10P60014 251 aa4.13□□□□□ -1.75
PALB2-202ENST00000561514 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PALB2-202ENST00000561514 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
PALB2-202ENST00000561514 A0A1B0GU33 70 aa4.09□□□□□ -1.75
PALB2-202ENST00000561514 H0YAA0 97 aa4.09□□□□□ -1.75
PALB2-202ENST00000561514 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
PALB2-202ENST00000561514 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
PALB2-202ENST00000561514 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
PALB2-202ENST00000561514 H1FX-AS1Q4G0G2 97 aa4.06□□□□□ -1.76
PALB2-202ENST00000561514 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
PALB2-202ENST00000561514 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
PALB2-202ENST00000561514 NEBP20929 6669 aa3.99□□□□□ -1.77
PALB2-202ENST00000561514 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
PALB2-202ENST00000561514 KMT2DO14686 5537 aa3.84□□□□□ -1.79
PALB2-202ENST00000561514 MT1BP07438 61 aa3.84□□□□□ -1.79
PALB2-202ENST00000561514 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
PALB2-202ENST00000561514 KRTAP19-8Q3LI54 63 aa3.82□□□□□ -1.8
PALB2-202ENST00000561514 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
PALB2-202ENST00000561514 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
PALB2-202ENST00000561514 SPRR2GQ9BYE4 73 aa3.8□□□□□ -1.8
PALB2-202ENST00000561514 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms