RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 FLG2Q5D862 2391 aaPredicted RBP7.41□□□□□ -1.22
RABGGTA-220ENST00000560998 Q5VSD8 79 aa7.4□□□□□ -1.23
RABGGTA-220ENST00000560998 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.23
RABGGTA-220ENST00000560998 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.23
RABGGTA-220ENST00000560998 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
RABGGTA-220ENST00000560998 RYR3Q15413 4870 aa7.39□□□□□ -1.23
RABGGTA-220ENST00000560998 TNXBP22105 4242 aa7.38□□□□□ -1.23
RABGGTA-220ENST00000560998 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
RABGGTA-220ENST00000560998 RYR1P21817 5038 aa7.36□□□□□ -1.23
RABGGTA-220ENST00000560998 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
RABGGTA-220ENST00000560998 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
RABGGTA-220ENST00000560998 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
RABGGTA-220ENST00000560998 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
RABGGTA-220ENST00000560998 KRTAP15-1Q3LI76 137 aa7.3□□□□□ -1.24
RABGGTA-220ENST00000560998 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
RABGGTA-220ENST00000560998 KIAA1109Q2LD37 5005 aa7.22□□□□□ -1.25
RABGGTA-220ENST00000560998 MT1HL1P0DM35 61 aa7.2□□□□□ -1.26
RABGGTA-220ENST00000560998 DMBT1Q9UGM3 2413 aaPredicted RBP7.2□□□□□ -1.26
RABGGTA-220ENST00000560998 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
RABGGTA-220ENST00000560998 XP32Q5T750 250 aa7.15□□□□□ -1.26
RABGGTA-220ENST00000560998 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.27
RABGGTA-220ENST00000560998 MYCBP2O75592 4640 aa7.13□□□□□ -1.27
RABGGTA-220ENST00000560998 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
RABGGTA-220ENST00000560998 A0A0D9SG42 100 aa7.12□□□□□ -1.27
RABGGTA-220ENST00000560998 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
RABGGTA-220ENST00000560998 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
RABGGTA-220ENST00000560998 S4R3F8 94 aa7.09□□□□□ -1.27
RABGGTA-220ENST00000560998 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
RABGGTA-220ENST00000560998 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
RABGGTA-220ENST00000560998 KRTAP4-5Q9BYR2 181 aa6.97□□□□□ -1.29
RABGGTA-220ENST00000560998 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
RABGGTA-220ENST00000560998 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
RABGGTA-220ENST00000560998 LRP2P98164 4655 aa6.88□□□□□ -1.31
RABGGTA-220ENST00000560998 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
RABGGTA-220ENST00000560998 M0QZ58 72 aa6.86□□□□□ -1.31
RABGGTA-220ENST00000560998 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
RABGGTA-220ENST00000560998 LPAP08519 4548 aa6.82□□□□□ -1.32
RABGGTA-220ENST00000560998 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
RABGGTA-220ENST00000560998 J3QL48 77 aa6.75□□□□□ -1.33
RABGGTA-220ENST00000560998 PLAC4Q8WY50 150 aa6.73□□□□□ -1.33
RABGGTA-220ENST00000560998 HERC2O95714 4834 aa6.73□□□□□ -1.33
RABGGTA-220ENST00000560998 SEC61BP60468 96 aaKnown RBP6.71□□□□□ -1.33
RABGGTA-220ENST00000560998 MUC17Q685J3 4493 aa6.65□□□□□ -1.35
RABGGTA-220ENST00000560998 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
RABGGTA-220ENST00000560998 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
RABGGTA-220ENST00000560998 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
RABGGTA-220ENST00000560998 R4GN34 69 aa6.49□□□□□ -1.37
RABGGTA-220ENST00000560998 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
RABGGTA-220ENST00000560998 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
RABGGTA-220ENST00000560998 HERC1Q15751 4861 aa6.37□□□□□ -1.39
RABGGTA-220ENST00000560998 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
RABGGTA-220ENST00000560998 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
RABGGTA-220ENST00000560998 MUC2Q02817 5179 aa6.29□□□□□ -1.4
RABGGTA-220ENST00000560998 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
RABGGTA-220ENST00000560998 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
RABGGTA-220ENST00000560998 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
RABGGTA-220ENST00000560998 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
RABGGTA-220ENST00000560998 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
RABGGTA-220ENST00000560998 TNP1P09430 55 aa6.1□□□□□ -1.43
RABGGTA-220ENST00000560998 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
RABGGTA-220ENST00000560998 MT1HP80294 61 aa6.02□□□□□ -1.45
RABGGTA-220ENST00000560998 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
RABGGTA-220ENST00000560998 FAT4Q6V0I7 4981 aa6.02□□□□□ -1.45
RABGGTA-220ENST00000560998 M0R2T5 61 aa5.98□□□□□ -1.45
RABGGTA-220ENST00000560998 INE1O15225 51 aa5.98□□□□□ -1.45
RABGGTA-220ENST00000560998 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
RABGGTA-220ENST00000560998 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
RABGGTA-220ENST00000560998 MT2AP02795 61 aa5.89□□□□□ -1.47
RABGGTA-220ENST00000560998 MT1FP04733 61 aa5.87□□□□□ -1.47
RABGGTA-220ENST00000560998 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
RABGGTA-220ENST00000560998 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
RABGGTA-220ENST00000560998 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
RABGGTA-220ENST00000560998 MT1BP07438 61 aa5.64□□□□□ -1.51
RABGGTA-220ENST00000560998 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
RABGGTA-220ENST00000560998 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
RABGGTA-220ENST00000560998 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
RABGGTA-220ENST00000560998 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
RABGGTA-220ENST00000560998 MT1XP80297 61 aa5.55□□□□□ -1.52
RABGGTA-220ENST00000560998 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
RABGGTA-220ENST00000560998 LCE2BO14633 110 aa5.42□□□□□ -1.54
RABGGTA-220ENST00000560998 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
RABGGTA-220ENST00000560998 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
RABGGTA-220ENST00000560998 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
RABGGTA-220ENST00000560998 USH2AO75445 5202 aa5.22□□□□□ -1.57
RABGGTA-220ENST00000560998 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
RABGGTA-220ENST00000560998 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
RABGGTA-220ENST00000560998 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
RABGGTA-220ENST00000560998 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
RABGGTA-220ENST00000560998 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
RABGGTA-220ENST00000560998 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
RABGGTA-220ENST00000560998 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
RABGGTA-220ENST00000560998 KMT2DO14686 5537 aa5.02□□□□□ -1.61
RABGGTA-220ENST00000560998 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
RABGGTA-220ENST00000560998 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
RABGGTA-220ENST00000560998 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
RABGGTA-220ENST00000560998 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
RABGGTA-220ENST00000560998 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
RABGGTA-220ENST00000560998 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
RABGGTA-220ENST00000560998 FSIP2Q5CZC0 6907 aa4.9□□□□□ -1.63
RABGGTA-220ENST00000560998 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms