RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 PRUNE2Q8WUY3 3088 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 RYR1P21817 5038 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 A0A096LNI7 61 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 APCP25054 2843 aa1.81□□□□□ -2.12
WHAMM-202ENST00000560964 CSMD1Q96PZ7 3565 aa1.8□□□□□ -2.12
WHAMM-202ENST00000560964 RYR3Q15413 4870 aa1.8□□□□□ -2.12
WHAMM-202ENST00000560964 NF1P21359 2839 aa1.8□□□□□ -2.12
WHAMM-202ENST00000560964 DMXL2Q8TDJ6 3036 aa1.78□□□□□ -2.12
WHAMM-202ENST00000560964 DMDP11532 3685 aa1.78□□□□□ -2.12
WHAMM-202ENST00000560964 DMXL1Q9Y485 3027 aa1.78□□□□□ -2.12
WHAMM-202ENST00000560964 HRNRQ86YZ3 2850 aaPredicted RBP1.78□□□□□ -2.12
WHAMM-202ENST00000560964 IGF2RP11717 2491 aa1.78□□□□□ -2.12
WHAMM-202ENST00000560964 LRBAP50851 2863 aa1.77□□□□□ -2.13
WHAMM-202ENST00000560964 TENM2Q9NT68 2774 aa1.77□□□□□ -2.13
WHAMM-202ENST00000560964 NSD1Q96L73 2696 aaPredicted RBP1.77□□□□□ -2.13
WHAMM-202ENST00000560964 BSNQ9UPA5 3926 aa1.77□□□□□ -2.13
WHAMM-202ENST00000560964 SPINK1P00995 79 aa1.77□□□□□ -2.13
WHAMM-202ENST00000560964 APLNQ9ULZ1 77 aa1.77□□□□□ -2.13
WHAMM-202ENST00000560964 KRTAP12-1P59990 96 aa1.76□□□□□ -2.13
WHAMM-202ENST00000560964 SPINK6Q6UWN8 80 aa1.76□□□□□ -2.13
WHAMM-202ENST00000560964 SPENQ96T58 3664 aaKnown RBP1.76□□□□□ -2.13
WHAMM-202ENST00000560964 BIRC6Q9NR09 4857 aa1.76□□□□□ -2.13
WHAMM-202ENST00000560964 DCHS2Q6V1P9 2916 aa1.75□□□□□ -2.13
WHAMM-202ENST00000560964 ZANQ9Y493 2812 aa1.75□□□□□ -2.13
WHAMM-202ENST00000560964 SMG1Q96Q15 3661 aaKnown RBP1.74□□□□□ -2.13
WHAMM-202ENST00000560964 SONP18583 2426 aaKnown RBP1.74□□□□□ -2.13
WHAMM-202ENST00000560964 CRYBG3Q68DQ2 2970 aa1.74□□□□□ -2.13
WHAMM-202ENST00000560964 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
WHAMM-202ENST00000560964 J3QKU1 62 aa1.73□□□□□ -2.13
WHAMM-202ENST00000560964 F8P00451 2351 aa1.73□□□□□ -2.13
WHAMM-202ENST00000560964 MYO15AQ9UKN7 3530 aa1.73□□□□□ -2.13
WHAMM-202ENST00000560964 MXRA5Q9NR99 2828 aa1.72□□□□□ -2.13
WHAMM-202ENST00000560964 AKAP9Q99996 3911 aa1.72□□□□□ -2.13
WHAMM-202ENST00000560964 S4R3F8 94 aa1.72□□□□□ -2.13
WHAMM-202ENST00000560964 HYDINQ4G0P3 5121 aa1.72□□□□□ -2.13
WHAMM-202ENST00000560964 ATMQ13315 3056 aa1.71□□□□□ -2.14
WHAMM-202ENST00000560964 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
WHAMM-202ENST00000560964 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
WHAMM-202ENST00000560964 NBPF19A0A087WUL8 3843 aa1.7□□□□□ -2.14
WHAMM-202ENST00000560964 CELSR1Q9NYQ6 3014 aa1.7□□□□□ -2.14
WHAMM-202ENST00000560964 OTOGQ6ZRI0 2925 aa1.69□□□□□ -2.14
WHAMM-202ENST00000560964 CENPEQ02224 2701 aa1.69□□□□□ -2.14
WHAMM-202ENST00000560964 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
WHAMM-202ENST00000560964 RPS29P62273 56 aaKnown RBP1.68□□□□□ -2.14
WHAMM-202ENST00000560964 COL12A1Q99715 3063 aa1.68□□□□□ -2.14
WHAMM-202ENST00000560964 ACANP16112 2415 aa1.67□□□□□ -2.14
WHAMM-202ENST00000560964 MGAM2Q2M2H8 2515 aa1.67□□□□□ -2.14
WHAMM-202ENST00000560964 FSIP2Q5CZC0 6907 aa1.66□□□□□ -2.14
WHAMM-202ENST00000560964 A0A0D9SG42 100 aa1.66□□□□□ -2.14
WHAMM-202ENST00000560964 VPS13CQ709C8 3753 aa1.65□□□□□ -2.15
WHAMM-202ENST00000560964 LAMA5O15230 3695 aa1.64□□□□□ -2.15
WHAMM-202ENST00000560964 MACF1Q9UPN3 7388 aaKnown RBP1.64□□□□□ -2.15
WHAMM-202ENST00000560964 MEGF8Q7Z7M0 2845 aa1.64□□□□□ -2.15
WHAMM-202ENST00000560964 TGP01266 2768 aa1.64□□□□□ -2.15
WHAMM-202ENST00000560964 NIPBLQ6KC79 2804 aaeCLIP1.63□□□□□ -2.15
WHAMM-202ENST00000560964 NEBP20929 6669 aa1.62□□□□□ -2.15
WHAMM-202ENST00000560964 RYR2Q92736 4967 aa1.61□□□□□ -2.15
WHAMM-202ENST00000560964 SVEP1Q4LDE5 3571 aa1.61□□□□□ -2.15
WHAMM-202ENST00000560964 M0QZ58 72 aa1.61□□□□□ -2.15
WHAMM-202ENST00000560964 TENM3Q9P273 2699 aa1.6□□□□□ -2.15
WHAMM-202ENST00000560964 HIVEP1P15822 2718 aa1.6□□□□□ -2.15
WHAMM-202ENST00000560964 ANK3Q12955 4377 aaKnown RBP1.6□□□□□ -2.15
WHAMM-202ENST00000560964 DNAH1Q9P2D7 4330 aa1.6□□□□□ -2.15
WHAMM-202ENST00000560964 SYNE2Q8WXH0 6885 aaKnown RBP1.6□□□□□ -2.15
WHAMM-202ENST00000560964 TRRAPQ9Y4A5 3859 aa1.6□□□□□ -2.15
WHAMM-202ENST00000560964 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
WHAMM-202ENST00000560964 ITPR2Q14571 2701 aa1.58□□□□□ -2.16
WHAMM-202ENST00000560964 ANK2Q01484 3957 aa1.57□□□□□ -2.16
WHAMM-202ENST00000560964 SRRM2Q9UQ35 2752 aaKnown RBP1.56□□□□□ -2.16
WHAMM-202ENST00000560964 DNAH3Q8TD57 4116 aa1.56□□□□□ -2.16
WHAMM-202ENST00000560964 CMYA5Q8N3K9 4069 aa1.56□□□□□ -2.16
WHAMM-202ENST00000560964 DNAH7Q8WXX0 4024 aa1.55□□□□□ -2.16
WHAMM-202ENST00000560964 VPS13DQ5THJ4 4388 aa1.55□□□□□ -2.16
WHAMM-202ENST00000560964 CSMD2Q7Z408 3487 aa1.54□□□□□ -2.16
WHAMM-202ENST00000560964 DNAH6Q9C0G6 4158 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 HERC1Q15751 4861 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 C9orf92A6NGG3 77 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 KRTAP20-1Q3LI63 56 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 LYSTQ99698 3801 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 SMR3AQ99954 134 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
WHAMM-202ENST00000560964 PRKDCP78527 4128 aaKnown RBP1.52□□□□□ -2.17
WHAMM-202ENST00000560964 HECTD4Q9Y4D8 3996 aa1.52□□□□□ -2.17
WHAMM-202ENST00000560964 DYNC2H1Q8NCM8 4307 aaKnown RBP1.52□□□□□ -2.17
WHAMM-202ENST00000560964 FRAS1Q86XX4 4008 aa1.51□□□□□ -2.17
WHAMM-202ENST00000560964 ZNF469Q96JG9 3925 aaPredicted RBP1.5□□□□□ -2.17
WHAMM-202ENST00000560964 STAB2Q8WWQ8 2551 aa1.5□□□□□ -2.17
WHAMM-202ENST00000560964 HERC2O95714 4834 aa1.49□□□□□ -2.17
WHAMM-202ENST00000560964 DMBT1Q9UGM3 2413 aaPredicted RBP1.49□□□□□ -2.17
WHAMM-202ENST00000560964 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
WHAMM-202ENST00000560964 COL7A1Q02388 2944 aa1.47□□□□□ -2.17
WHAMM-202ENST00000560964 DNAH8Q96JB1 4490 aa1.46□□□□□ -2.17
WHAMM-202ENST00000560964 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.17
WHAMM-202ENST00000560964 SSPOA2VEC9 5147 aa1.45□□□□□ -2.18
WHAMM-202ENST00000560964 DNAH10Q8IVF4 4471 aa1.45□□□□□ -2.18
WHAMM-202ENST00000560964 CUBNO60494 3623 aa1.45□□□□□ -2.18
WHAMM-202ENST00000560964 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms