RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MP68P56378 58 aa7.01□□□□□ -1.29
SNRPA1-213ENST00000560856 MT-ATP8P03928 68 aa7□□□□□ -1.29
SNRPA1-213ENST00000560856 IMUPQ9GZP8 106 aa6.99□□□□□ -1.29
SNRPA1-213ENST00000560856 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-213ENST00000560856 H3BPC8 53 aa6.96□□□□□ -1.3
SNRPA1-213ENST00000560856 A8MUN3 132 aa6.95□□□□□ -1.3
SNRPA1-213ENST00000560856 SCGB1A1P11684 91 aa6.95□□□□□ -1.3
SNRPA1-213ENST00000560856 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
SNRPA1-213ENST00000560856 FAM236BA0A1B0GV22 79 aa6.94□□□□□ -1.3
SNRPA1-213ENST00000560856 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
SNRPA1-213ENST00000560856 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
SNRPA1-213ENST00000560856 NDUFC1O43677 76 aa6.89□□□□□ -1.31
SNRPA1-213ENST00000560856 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
SNRPA1-213ENST00000560856 TRAV7A0A075B6U4 112 aa6.85□□□□□ -1.31
SNRPA1-213ENST00000560856 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
SNRPA1-213ENST00000560856 MT1BP07438 61 aa6.84□□□□□ -1.31
SNRPA1-213ENST00000560856 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
SNRPA1-213ENST00000560856 H0YAA0 97 aa6.83□□□□□ -1.32
SNRPA1-213ENST00000560856 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
SNRPA1-213ENST00000560856 SMIM20Q8N5G0 67 aa6.82□□□□□ -1.32
SNRPA1-213ENST00000560856 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
SNRPA1-213ENST00000560856 Q5VV11 94 aa6.76□□□□□ -1.33
SNRPA1-213ENST00000560856 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
SNRPA1-213ENST00000560856 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
SNRPA1-213ENST00000560856 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
SNRPA1-213ENST00000560856 SNURFQ9Y675 71 aa6.69□□□□□ -1.34
SNRPA1-213ENST00000560856 ACYP2P14621 99 aa6.66□□□□□ -1.34
SNRPA1-213ENST00000560856 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
SNRPA1-213ENST00000560856 P0C880 135 aa6.65□□□□□ -1.34
SNRPA1-213ENST00000560856 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.35
SNRPA1-213ENST00000560856 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
SNRPA1-213ENST00000560856 A6NN06 94 aa6.62□□□□□ -1.35
SNRPA1-213ENST00000560856 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
SNRPA1-213ENST00000560856 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.35
SNRPA1-213ENST00000560856 R4GN34 69 aa6.52□□□□□ -1.37
SNRPA1-213ENST00000560856 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
SNRPA1-213ENST00000560856 COX7CP15954 63 aa6.5□□□□□ -1.37
SNRPA1-213ENST00000560856 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
SNRPA1-213ENST00000560856 M0QZ58 72 aa6.49□□□□□ -1.37
SNRPA1-213ENST00000560856 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
SNRPA1-213ENST00000560856 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
SNRPA1-213ENST00000560856 MT1XP80297 61 aa6.44□□□□□ -1.38
SNRPA1-213ENST00000560856 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
SNRPA1-213ENST00000560856 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SNRPA1-213ENST00000560856 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
SNRPA1-213ENST00000560856 H7BZZ5 65 aa6.4□□□□□ -1.38
SNRPA1-213ENST00000560856 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
SNRPA1-213ENST00000560856 COA5Q86WW8 74 aa6.38□□□□□ -1.39
SNRPA1-213ENST00000560856 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
SNRPA1-213ENST00000560856 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
SNRPA1-213ENST00000560856 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
SNRPA1-213ENST00000560856 CCDC179H3BU77 68 aa6.27□□□□□ -1.41
SNRPA1-213ENST00000560856 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
SNRPA1-213ENST00000560856 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
SNRPA1-213ENST00000560856 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
SNRPA1-213ENST00000560856 KMT2DO14686 5537 aa6.22□□□□□ -1.41
SNRPA1-213ENST00000560856 SEC61GP60059 68 aa6.15□□□□□ -1.42
SNRPA1-213ENST00000560856 SERP1Q9Y6X1 66 aa6.15□□□□□ -1.42
SNRPA1-213ENST00000560856 KRTAP10-7P60409 375 aaPredicted RBP6.14□□□□□ -1.43
SNRPA1-213ENST00000560856 NEBP20929 6669 aa6.13□□□□□ -1.43
SNRPA1-213ENST00000560856 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
SNRPA1-213ENST00000560856 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
SNRPA1-213ENST00000560856 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
SNRPA1-213ENST00000560856 A0A1B0GU33 70 aa6.09□□□□□ -1.43
SNRPA1-213ENST00000560856 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
SNRPA1-213ENST00000560856 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
SNRPA1-213ENST00000560856 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
SNRPA1-213ENST00000560856 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
SNRPA1-213ENST00000560856 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
SNRPA1-213ENST00000560856 TMEM258P61165 79 aa6.06□□□□□ -1.44
SNRPA1-213ENST00000560856 A0A0D9SG42 100 aa6.04□□□□□ -1.44
SNRPA1-213ENST00000560856 A0A1B0GU69 56 aa6.01□□□□□ -1.45
SNRPA1-213ENST00000560856 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
SNRPA1-213ENST00000560856 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
SNRPA1-213ENST00000560856 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
SNRPA1-213ENST00000560856 SPRR2EP22531 72 aa5.93□□□□□ -1.46
SNRPA1-213ENST00000560856 SPRR2BP35325 72 aa5.93□□□□□ -1.46
SNRPA1-213ENST00000560856 SPRR2AP35326 72 aa5.93□□□□□ -1.46
SNRPA1-213ENST00000560856 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
SNRPA1-213ENST00000560856 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
SNRPA1-213ENST00000560856 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
SNRPA1-213ENST00000560856 KRTAP20-1Q3LI63 56 aa5.91□□□□□ -1.46
SNRPA1-213ENST00000560856 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
SNRPA1-213ENST00000560856 A8MU10 97 aa5.9□□□□□ -1.46
SNRPA1-213ENST00000560856 V9GYY9 64 aa5.86□□□□□ -1.47
SNRPA1-213ENST00000560856 PRR15LQ9BU68 103 aa5.85□□□□□ -1.47
SNRPA1-213ENST00000560856 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
SNRPA1-213ENST00000560856 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
SNRPA1-213ENST00000560856 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
SNRPA1-213ENST00000560856 SPRR2DP22532 72 aa5.73□□□□□ -1.49
SNRPA1-213ENST00000560856 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
SNRPA1-213ENST00000560856 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
SNRPA1-213ENST00000560856 UQCR11O14957 56 aa5.69□□□□□ -1.5
SNRPA1-213ENST00000560856 MT1EP04732 61 aa5.69□□□□□ -1.5
SNRPA1-213ENST00000560856 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
SNRPA1-213ENST00000560856 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
SNRPA1-213ENST00000560856 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
SNRPA1-213ENST00000560856 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
SNRPA1-213ENST00000560856 Q1T7F1 81 aa5.61□□□□□ -1.51
SNRPA1-213ENST00000560856 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms