RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 J3QR89 54 aa6.05□□□□□ -1.44
CTDSPL2-209ENST00000560620 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
CTDSPL2-209ENST00000560620 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
CTDSPL2-209ENST00000560620 MP68P56378 58 aa5.98□□□□□ -1.45
CTDSPL2-209ENST00000560620 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
CTDSPL2-209ENST00000560620 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
CTDSPL2-209ENST00000560620 OCR1Q9BZK8 76 aa5.94□□□□□ -1.46
CTDSPL2-209ENST00000560620 NDUFC1O43677 76 aa5.91□□□□□ -1.46
CTDSPL2-209ENST00000560620 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
CTDSPL2-209ENST00000560620 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
CTDSPL2-209ENST00000560620 A8MUN3 132 aa5.89□□□□□ -1.47
CTDSPL2-209ENST00000560620 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
CTDSPL2-209ENST00000560620 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CTDSPL2-209ENST00000560620 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
CTDSPL2-209ENST00000560620 H3BPC8 53 aa5.85□□□□□ -1.47
CTDSPL2-209ENST00000560620 Q5VV11 94 aa5.84□□□□□ -1.47
CTDSPL2-209ENST00000560620 ANAPC13Q9BS18 74 aa5.82□□□□□ -1.48
CTDSPL2-209ENST00000560620 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
CTDSPL2-209ENST00000560620 MT-ATP8P03928 68 aa5.8□□□□□ -1.48
CTDSPL2-209ENST00000560620 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
CTDSPL2-209ENST00000560620 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
CTDSPL2-209ENST00000560620 H0YAA0 97 aa5.77□□□□□ -1.49
CTDSPL2-209ENST00000560620 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
CTDSPL2-209ENST00000560620 MT1BP07438 61 aa5.76□□□□□ -1.49
CTDSPL2-209ENST00000560620 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
CTDSPL2-209ENST00000560620 A6NN06 94 aa5.75□□□□□ -1.49
CTDSPL2-209ENST00000560620 SEC61GP60059 68 aa5.74□□□□□ -1.49
CTDSPL2-209ENST00000560620 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
CTDSPL2-209ENST00000560620 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
CTDSPL2-209ENST00000560620 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-209ENST00000560620 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-209ENST00000560620 ACYP2P14621 99 aa5.66□□□□□ -1.5
CTDSPL2-209ENST00000560620 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
CTDSPL2-209ENST00000560620 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
CTDSPL2-209ENST00000560620 R4GN34 69 aa5.64□□□□□ -1.51
CTDSPL2-209ENST00000560620 V9GYY9 64 aa5.64□□□□□ -1.51
CTDSPL2-209ENST00000560620 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
CTDSPL2-209ENST00000560620 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
CTDSPL2-209ENST00000560620 PRO0628Q9UI54 55 aa5.62□□□□□ -1.51
CTDSPL2-209ENST00000560620 P0C880 135 aa5.61□□□□□ -1.51
CTDSPL2-209ENST00000560620 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
CTDSPL2-209ENST00000560620 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
CTDSPL2-209ENST00000560620 M0QZ58 72 aa5.59□□□□□ -1.51
CTDSPL2-209ENST00000560620 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
CTDSPL2-209ENST00000560620 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
CTDSPL2-209ENST00000560620 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
CTDSPL2-209ENST00000560620 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
CTDSPL2-209ENST00000560620 LINC01554Q52M75 96 aa5.55□□□□□ -1.52
CTDSPL2-209ENST00000560620 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
CTDSPL2-209ENST00000560620 TMEM258P61165 79 aa5.49□□□□□ -1.53
CTDSPL2-209ENST00000560620 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
CTDSPL2-209ENST00000560620 H3BS24 57 aa5.43□□□□□ -1.54
CTDSPL2-209ENST00000560620 MT1XP80297 61 aa5.43□□□□□ -1.54
CTDSPL2-209ENST00000560620 COX7CP15954 63 aa5.41□□□□□ -1.54
CTDSPL2-209ENST00000560620 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
CTDSPL2-209ENST00000560620 COA5Q86WW8 74 aa5.37□□□□□ -1.55
CTDSPL2-209ENST00000560620 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
CTDSPL2-209ENST00000560620 SERP1Q9Y6X1 66 aa5.33□□□□□ -1.56
CTDSPL2-209ENST00000560620 KMT2DO14686 5537 aa5.33□□□□□ -1.56
CTDSPL2-209ENST00000560620 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
CTDSPL2-209ENST00000560620 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
CTDSPL2-209ENST00000560620 H7BZZ5 65 aa5.29□□□□□ -1.56
CTDSPL2-209ENST00000560620 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
CTDSPL2-209ENST00000560620 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
CTDSPL2-209ENST00000560620 NEBP20929 6669 aa5.28□□□□□ -1.56
CTDSPL2-209ENST00000560620 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
CTDSPL2-209ENST00000560620 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
CTDSPL2-209ENST00000560620 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
CTDSPL2-209ENST00000560620 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
CTDSPL2-209ENST00000560620 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
CTDSPL2-209ENST00000560620 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
CTDSPL2-209ENST00000560620 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
CTDSPL2-209ENST00000560620 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
CTDSPL2-209ENST00000560620 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
CTDSPL2-209ENST00000560620 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
CTDSPL2-209ENST00000560620 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
CTDSPL2-209ENST00000560620 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
CTDSPL2-209ENST00000560620 A0A0D9SG42 100 aa5.19□□□□□ -1.58
CTDSPL2-209ENST00000560620 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
CTDSPL2-209ENST00000560620 SPRR2EP22531 72 aa5.18□□□□□ -1.58
CTDSPL2-209ENST00000560620 SPRR2BP35325 72 aa5.18□□□□□ -1.58
CTDSPL2-209ENST00000560620 SPRR2AP35326 72 aa5.18□□□□□ -1.58
CTDSPL2-209ENST00000560620 A0A1B0GU33 70 aa5.17□□□□□ -1.58
CTDSPL2-209ENST00000560620 SPATA8Q6RVD6 105 aa5.17□□□□□ -1.58
CTDSPL2-209ENST00000560620 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
CTDSPL2-209ENST00000560620 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
CTDSPL2-209ENST00000560620 A0A1B0GU69 56 aa5.14□□□□□ -1.59
CTDSPL2-209ENST00000560620 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
CTDSPL2-209ENST00000560620 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
CTDSPL2-209ENST00000560620 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
CTDSPL2-209ENST00000560620 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
CTDSPL2-209ENST00000560620 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
CTDSPL2-209ENST00000560620 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
CTDSPL2-209ENST00000560620 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
CTDSPL2-209ENST00000560620 SPRR2DP22532 72 aa5□□□□□ -1.61
CTDSPL2-209ENST00000560620 A8MU10 97 aa4.98□□□□□ -1.61
CTDSPL2-209ENST00000560620 Q1T7F1 81 aa4.98□□□□□ -1.61
CTDSPL2-209ENST00000560620 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
CTDSPL2-209ENST00000560620 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
CTDSPL2-209ENST00000560620 LINC01558Q9Y6Z2 57 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms