RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 UQCR11O14957 56 aa9.81□□□□□ -0.84
HMBOX1-215ENST00000560599 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
HMBOX1-215ENST00000560599 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
HMBOX1-215ENST00000560599 S4R3F8 94 aa9.73□□□□□ -0.85
HMBOX1-215ENST00000560599 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-215ENST00000560599 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
HMBOX1-215ENST00000560599 RBM12B-AS1Q9P1G2 102 aa9.68□□□□□ -0.86
HMBOX1-215ENST00000560599 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
HMBOX1-215ENST00000560599 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
HMBOX1-215ENST00000560599 HERC2O95714 4834 aa9.65□□□□□ -0.86
HMBOX1-215ENST00000560599 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
HMBOX1-215ENST00000560599 A0A1B0GU33 70 aa9.59□□□□□ -0.87
HMBOX1-215ENST00000560599 A6NN06 94 aa9.59□□□□□ -0.87
HMBOX1-215ENST00000560599 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
HMBOX1-215ENST00000560599 H0YAA0 97 aa9.49□□□□□ -0.89
HMBOX1-215ENST00000560599 LRP2P98164 4655 aa9.48□□□□□ -0.89
HMBOX1-215ENST00000560599 KTN1-AS1Q86SY8 53 aa9.45□□□□□ -0.9
HMBOX1-215ENST00000560599 LPAP08519 4548 aa9.44□□□□□ -0.9
HMBOX1-215ENST00000560599 KRTAP10-6P60371 365 aaPredicted RBP9.42□□□□□ -0.9
HMBOX1-215ENST00000560599 CSAG1Q6PB30 78 aa9.42□□□□□ -0.9
HMBOX1-215ENST00000560599 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
HMBOX1-215ENST00000560599 MUC17Q685J3 4493 aa9.4□□□□□ -0.91
HMBOX1-215ENST00000560599 KRTAP4-1Q9BYQ7 146 aa9.32□□□□□ -0.92
HMBOX1-215ENST00000560599 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
HMBOX1-215ENST00000560599 K7ERS5 55 aa9.28□□□□□ -0.92
HMBOX1-215ENST00000560599 P0C880 135 aa9.28□□□□□ -0.92
HMBOX1-215ENST00000560599 KRTAP13-4Q3LI77 160 aa9.21□□□□□ -0.94
HMBOX1-215ENST00000560599 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
HMBOX1-215ENST00000560599 M0QZ58 72 aa9.14□□□□□ -0.95
HMBOX1-215ENST00000560599 A0A0D9SG42 100 aa9.11□□□□□ -0.95
HMBOX1-215ENST00000560599 PCLOQ9Y6V0 5065 aa9.09□□□□□ -0.95
HMBOX1-215ENST00000560599 HERC1Q15751 4861 aa9.03□□□□□ -0.96
HMBOX1-215ENST00000560599 HMCN2Q8NDA2 5059 aa9.03□□□□□ -0.96
HMBOX1-215ENST00000560599 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
HMBOX1-215ENST00000560599 R4GN34 69 aa8.95□□□□□ -0.98
HMBOX1-215ENST00000560599 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
HMBOX1-215ENST00000560599 ROMO1P60602 79 aa8.92□□□□□ -0.98
HMBOX1-215ENST00000560599 KRTAP12-2P59991 146 aa8.89□□□□□ -0.99
HMBOX1-215ENST00000560599 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
HMBOX1-215ENST00000560599 FLGP20930 4061 aaPredicted RBP8.84□□□□□ -0.99
HMBOX1-215ENST00000560599 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
HMBOX1-215ENST00000560599 LINC01554Q52M75 96 aa8.79□□□□□ -1
HMBOX1-215ENST00000560599 LCE2CQ5TA81 110 aa8.78□□□□□ -1
HMBOX1-215ENST00000560599 KRTAP25-1Q3LHN0 102 aa8.76□□□□□ -1.01
HMBOX1-215ENST00000560599 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
HMBOX1-215ENST00000560599 MT1HP80294 61 aa8.6□□□□□ -1.03
HMBOX1-215ENST00000560599 M0R2T5 61 aa8.59□□□□□ -1.03
HMBOX1-215ENST00000560599 MUC2Q02817 5179 aa8.56□□□□□ -1.04
HMBOX1-215ENST00000560599 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
HMBOX1-215ENST00000560599 CAMK2N1Q7Z7J9 78 aa8.46□□□□□ -1.06
HMBOX1-215ENST00000560599 SPRR2GQ9BYE4 73 aa8.42□□□□□ -1.06
HMBOX1-215ENST00000560599 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
HMBOX1-215ENST00000560599 UBR4Q5T4S7 5183 aa8.39□□□□□ -1.07
HMBOX1-215ENST00000560599 MT2AP02795 61 aa8.38□□□□□ -1.07
HMBOX1-215ENST00000560599 MT1FP04733 61 aa8.33□□□□□ -1.08
HMBOX1-215ENST00000560599 KRTAP10-10P60014 251 aa8.33□□□□□ -1.08
HMBOX1-215ENST00000560599 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
HMBOX1-215ENST00000560599 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
HMBOX1-215ENST00000560599 KRTAP9-8Q9BYQ0 159 aa8.32□□□□□ -1.08
HMBOX1-215ENST00000560599 FAT4Q6V0I7 4981 aa8.3□□□□□ -1.08
HMBOX1-215ENST00000560599 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
HMBOX1-215ENST00000560599 KRTAP19-8Q3LI54 63 aa8.16□□□□□ -1.1
HMBOX1-215ENST00000560599 PP632Q6XCG6 107 aa8.14□□□□□ -1.11
HMBOX1-215ENST00000560599 TNP1P09430 55 aa8.12□□□□□ -1.11
HMBOX1-215ENST00000560599 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
HMBOX1-215ENST00000560599 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
HMBOX1-215ENST00000560599 MT1BP07438 61 aa7.98□□□□□ -1.13
HMBOX1-215ENST00000560599 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
HMBOX1-215ENST00000560599 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
HMBOX1-215ENST00000560599 KRTAP10-5P60370 271 aa7.8□□□□□ -1.16
HMBOX1-215ENST00000560599 MT1XP80297 61 aa7.8□□□□□ -1.16
HMBOX1-215ENST00000560599 PRO2289Q9P1D8 64 aa7.75□□□□□ -1.17
HMBOX1-215ENST00000560599 LCE2BO14633 110 aa7.7□□□□□ -1.18
HMBOX1-215ENST00000560599 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
HMBOX1-215ENST00000560599 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
HMBOX1-215ENST00000560599 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
HMBOX1-215ENST00000560599 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
HMBOX1-215ENST00000560599 NDUFAF8A1L188 74 aa7.39□□□□□ -1.23
HMBOX1-215ENST00000560599 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
HMBOX1-215ENST00000560599 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
HMBOX1-215ENST00000560599 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
HMBOX1-215ENST00000560599 USH2AO75445 5202 aa7.27□□□□□ -1.25
HMBOX1-215ENST00000560599 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
HMBOX1-215ENST00000560599 H3BS24 57 aa7.18□□□□□ -1.26
HMBOX1-215ENST00000560599 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
HMBOX1-215ENST00000560599 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
HMBOX1-215ENST00000560599 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
HMBOX1-215ENST00000560599 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
HMBOX1-215ENST00000560599 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
HMBOX1-215ENST00000560599 KRTAP19-4Q3LI73 84 aa6.9□□□□□ -1.31
HMBOX1-215ENST00000560599 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
HMBOX1-215ENST00000560599 MT1EP04732 61 aa6.84□□□□□ -1.32
HMBOX1-215ENST00000560599 MT1LQ93083 61 aa6.76□□□□□ -1.33
HMBOX1-215ENST00000560599 KMT2DO14686 5537 aa6.73□□□□□ -1.33
HMBOX1-215ENST00000560599 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
HMBOX1-215ENST00000560599 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
HMBOX1-215ENST00000560599 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
HMBOX1-215ENST00000560599 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
HMBOX1-215ENST00000560599 KRTAP19-3Q7Z4W3 81 aa6.5□□□□□ -1.37
HMBOX1-215ENST00000560599 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms