RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
RMDN3-209ENST00000560588 H0YAA0 97 aa5.31□□□□□ -1.56
RMDN3-209ENST00000560588 RBM12B-AS1Q9P1G2 102 aa5.31□□□□□ -1.56
RMDN3-209ENST00000560588 DMBT1Q9UGM3 2413 aaPredicted RBP5.3□□□□□ -1.56
RMDN3-209ENST00000560588 S4R3F8 94 aa5.3□□□□□ -1.56
RMDN3-209ENST00000560588 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
RMDN3-209ENST00000560588 KRTAP17-1Q9BYP8 105 aa5.28□□□□□ -1.56
RMDN3-209ENST00000560588 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
RMDN3-209ENST00000560588 K7ERS5 55 aa5.26□□□□□ -1.57
RMDN3-209ENST00000560588 KRTAP3-3Q9BYR6 98 aa5.26□□□□□ -1.57
RMDN3-209ENST00000560588 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
RMDN3-209ENST00000560588 H3BS24 57 aa5.22□□□□□ -1.57
RMDN3-209ENST00000560588 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
RMDN3-209ENST00000560588 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
RMDN3-209ENST00000560588 KIAA1109Q2LD37 5005 aa5.2□□□□□ -1.58
RMDN3-209ENST00000560588 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
RMDN3-209ENST00000560588 ADM2Q7Z4H4 148 aa5.18□□□□□ -1.58
RMDN3-209ENST00000560588 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
RMDN3-209ENST00000560588 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
RMDN3-209ENST00000560588 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
RMDN3-209ENST00000560588 LINC01554Q52M75 96 aa5.09□□□□□ -1.59
RMDN3-209ENST00000560588 P0C880 135 aa5.08□□□□□ -1.6
RMDN3-209ENST00000560588 KRTAP13-4Q3LI77 160 aa5.08□□□□□ -1.6
RMDN3-209ENST00000560588 ROMO1P60602 79 aa5.07□□□□□ -1.6
RMDN3-209ENST00000560588 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
RMDN3-209ENST00000560588 M0QZ58 72 aa5.06□□□□□ -1.6
RMDN3-209ENST00000560588 KRTAP25-1Q3LHN0 102 aa5.05□□□□□ -1.6
RMDN3-209ENST00000560588 A0A0D9SG42 100 aa5.04□□□□□ -1.6
RMDN3-209ENST00000560588 LRP2P98164 4655 aa5.03□□□□□ -1.6
RMDN3-209ENST00000560588 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
RMDN3-209ENST00000560588 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
RMDN3-209ENST00000560588 ABCA13Q86UQ4 5058 aa4.96□□□□□ -1.62
RMDN3-209ENST00000560588 BIRC6Q9NR09 4857 aa4.95□□□□□ -1.62
RMDN3-209ENST00000560588 LPAP08519 4548 aa4.94□□□□□ -1.62
RMDN3-209ENST00000560588 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
RMDN3-209ENST00000560588 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
RMDN3-209ENST00000560588 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
RMDN3-209ENST00000560588 HERC2O95714 4834 aa4.91□□□□□ -1.62
RMDN3-209ENST00000560588 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
RMDN3-209ENST00000560588 R4GN34 69 aa4.89□□□□□ -1.63
RMDN3-209ENST00000560588 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
RMDN3-209ENST00000560588 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
RMDN3-209ENST00000560588 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
RMDN3-209ENST00000560588 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
RMDN3-209ENST00000560588 HERC1Q15751 4861 aa4.74□□□□□ -1.65
RMDN3-209ENST00000560588 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
RMDN3-209ENST00000560588 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
RMDN3-209ENST00000560588 HMCN2Q8NDA2 5059 aa4.64□□□□□ -1.67
RMDN3-209ENST00000560588 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
RMDN3-209ENST00000560588 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
RMDN3-209ENST00000560588 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
RMDN3-209ENST00000560588 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
RMDN3-209ENST00000560588 MUC2Q02817 5179 aa4.55□□□□□ -1.68
RMDN3-209ENST00000560588 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
RMDN3-209ENST00000560588 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
RMDN3-209ENST00000560588 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
RMDN3-209ENST00000560588 M0R2T5 61 aa4.5□□□□□ -1.69
RMDN3-209ENST00000560588 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
RMDN3-209ENST00000560588 TNP1P09430 55 aa4.48□□□□□ -1.69
RMDN3-209ENST00000560588 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
RMDN3-209ENST00000560588 MT1HP80294 61 aa4.48□□□□□ -1.69
RMDN3-209ENST00000560588 LCE2BO14633 110 aa4.46□□□□□ -1.7
RMDN3-209ENST00000560588 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
RMDN3-209ENST00000560588 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
RMDN3-209ENST00000560588 MT2AP02795 61 aa4.4□□□□□ -1.71
RMDN3-209ENST00000560588 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
RMDN3-209ENST00000560588 MT1FP04733 61 aa4.37□□□□□ -1.71
RMDN3-209ENST00000560588 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
RMDN3-209ENST00000560588 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
RMDN3-209ENST00000560588 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
RMDN3-209ENST00000560588 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
RMDN3-209ENST00000560588 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
RMDN3-209ENST00000560588 MT1BP07438 61 aa4.22□□□□□ -1.73
RMDN3-209ENST00000560588 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
RMDN3-209ENST00000560588 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
RMDN3-209ENST00000560588 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
RMDN3-209ENST00000560588 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
RMDN3-209ENST00000560588 MT1XP80297 61 aa4.17□□□□□ -1.74
RMDN3-209ENST00000560588 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.75
RMDN3-209ENST00000560588 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
RMDN3-209ENST00000560588 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
RMDN3-209ENST00000560588 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
RMDN3-209ENST00000560588 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
RMDN3-209ENST00000560588 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
RMDN3-209ENST00000560588 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
RMDN3-209ENST00000560588 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
RMDN3-209ENST00000560588 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
RMDN3-209ENST00000560588 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
RMDN3-209ENST00000560588 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
RMDN3-209ENST00000560588 USH2AO75445 5202 aa3.82□□□□□ -1.8
RMDN3-209ENST00000560588 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
RMDN3-209ENST00000560588 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
RMDN3-209ENST00000560588 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
RMDN3-209ENST00000560588 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
RMDN3-209ENST00000560588 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.82
RMDN3-209ENST00000560588 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
RMDN3-209ENST00000560588 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
RMDN3-209ENST00000560588 INE1O15225 51 aa3.67□□□□□ -1.82
RMDN3-209ENST00000560588 MT1EP04732 61 aa3.64□□□□□ -1.83
RMDN3-209ENST00000560588 MT1LQ93083 61 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms