RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SPINK6Q6UWN8 80 aa4.97□□□□□ -1.61
CCDC33-209ENST00000560565 LRP1Q07954 4544 aaKnown RBP4.94□□□□□ -1.62
CCDC33-209ENST00000560565 PKHD1L1Q86WI1 4243 aa4.93□□□□□ -1.62
CCDC33-209ENST00000560565 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
CCDC33-209ENST00000560565 LCE2BO14633 110 aa4.92□□□□□ -1.62
CCDC33-209ENST00000560565 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
CCDC33-209ENST00000560565 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
CCDC33-209ENST00000560565 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
CCDC33-209ENST00000560565 K7ERS5 55 aa4.89□□□□□ -1.63
CCDC33-209ENST00000560565 LRP2P98164 4655 aa4.88□□□□□ -1.63
CCDC33-209ENST00000560565 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
CCDC33-209ENST00000560565 SPINK1P00995 79 aa4.86□□□□□ -1.63
CCDC33-209ENST00000560565 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
CCDC33-209ENST00000560565 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
CCDC33-209ENST00000560565 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
CCDC33-209ENST00000560565 TNXBP22105 4242 aa4.8□□□□□ -1.64
CCDC33-209ENST00000560565 KRTAP1-4P0C5Y4 121 aa4.8□□□□□ -1.64
CCDC33-209ENST00000560565 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
CCDC33-209ENST00000560565 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
CCDC33-209ENST00000560565 A0A1B0GU33 70 aa4.76□□□□□ -1.65
CCDC33-209ENST00000560565 KRTAP13-2Q52LG2 175 aa4.76□□□□□ -1.65
CCDC33-209ENST00000560565 TYMSOSQ8TAI1 123 aa4.75□□□□□ -1.65
CCDC33-209ENST00000560565 A8MUU9 505 aa4.74□□□□□ -1.65
CCDC33-209ENST00000560565 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
CCDC33-209ENST00000560565 ADM2Q7Z4H4 148 aa4.74□□□□□ -1.65
CCDC33-209ENST00000560565 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
CCDC33-209ENST00000560565 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
CCDC33-209ENST00000560565 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
CCDC33-209ENST00000560565 H3BS24 57 aa4.7□□□□□ -1.66
CCDC33-209ENST00000560565 LINC00304Q8N9R0 145 aa4.7□□□□□ -1.66
CCDC33-209ENST00000560565 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
CCDC33-209ENST00000560565 LCE2CQ5TA81 110 aa4.68□□□□□ -1.66
CCDC33-209ENST00000560565 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
CCDC33-209ENST00000560565 C20orf166-AS1Q96NR2 134 aa4.68□□□□□ -1.66
CCDC33-209ENST00000560565 H0YAA0 97 aa4.65□□□□□ -1.67
CCDC33-209ENST00000560565 ROMO1P60602 79 aa4.65□□□□□ -1.67
CCDC33-209ENST00000560565 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
CCDC33-209ENST00000560565 LPAP08519 4548 aa4.58□□□□□ -1.68
CCDC33-209ENST00000560565 LORP23490 312 aaPredicted RBP4.52□□□□□ -1.69
CCDC33-209ENST00000560565 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
CCDC33-209ENST00000560565 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
CCDC33-209ENST00000560565 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
CCDC33-209ENST00000560565 C9orf92A6NGG3 77 aa4.47□□□□□ -1.69
CCDC33-209ENST00000560565 S4R3F8 94 aa4.44□□□□□ -1.7
CCDC33-209ENST00000560565 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
CCDC33-209ENST00000560565 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
CCDC33-209ENST00000560565 M0QZ58 72 aa4.4□□□□□ -1.71
CCDC33-209ENST00000560565 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
CCDC33-209ENST00000560565 KRTAP10-6P60371 365 aaPredicted RBP4.37□□□□□ -1.71
CCDC33-209ENST00000560565 XP32Q5T750 250 aa4.36□□□□□ -1.71
CCDC33-209ENST00000560565 A0A0D9SG42 100 aa4.33□□□□□ -1.72
CCDC33-209ENST00000560565 P0C880 135 aa4.33□□□□□ -1.72
CCDC33-209ENST00000560565 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
CCDC33-209ENST00000560565 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
CCDC33-209ENST00000560565 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
CCDC33-209ENST00000560565 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
CCDC33-209ENST00000560565 NEBP20929 6669 aa4.26□□□□□ -1.73
CCDC33-209ENST00000560565 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
CCDC33-209ENST00000560565 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
CCDC33-209ENST00000560565 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
CCDC33-209ENST00000560565 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.73
CCDC33-209ENST00000560565 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
CCDC33-209ENST00000560565 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
CCDC33-209ENST00000560565 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
CCDC33-209ENST00000560565 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
CCDC33-209ENST00000560565 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
CCDC33-209ENST00000560565 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
CCDC33-209ENST00000560565 R4GN34 69 aa4.14□□□□□ -1.75
CCDC33-209ENST00000560565 USH2AO75445 5202 aa4.12□□□□□ -1.75
CCDC33-209ENST00000560565 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
CCDC33-209ENST00000560565 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
CCDC33-209ENST00000560565 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
CCDC33-209ENST00000560565 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
CCDC33-209ENST00000560565 FLGP20930 4061 aaPredicted RBP4.09□□□□□ -1.76
CCDC33-209ENST00000560565 MT1HP80294 61 aa4.05□□□□□ -1.76
CCDC33-209ENST00000560565 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
CCDC33-209ENST00000560565 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
CCDC33-209ENST00000560565 M0R2T5 61 aa4.02□□□□□ -1.77
CCDC33-209ENST00000560565 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
CCDC33-209ENST00000560565 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
CCDC33-209ENST00000560565 KMT2DO14686 5537 aa3.91□□□□□ -1.78
CCDC33-209ENST00000560565 TNP1P09430 55 aa3.91□□□□□ -1.78
CCDC33-209ENST00000560565 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
CCDC33-209ENST00000560565 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
CCDC33-209ENST00000560565 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
CCDC33-209ENST00000560565 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
CCDC33-209ENST00000560565 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
CCDC33-209ENST00000560565 MT2AP02795 61 aa3.78□□□□□ -1.8
CCDC33-209ENST00000560565 KRTAP10-10P60014 251 aa3.77□□□□□ -1.81
CCDC33-209ENST00000560565 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
CCDC33-209ENST00000560565 MT1FP04733 61 aa3.75□□□□□ -1.81
CCDC33-209ENST00000560565 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
CCDC33-209ENST00000560565 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
CCDC33-209ENST00000560565 INE1O15225 51 aa3.7□□□□□ -1.82
CCDC33-209ENST00000560565 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
CCDC33-209ENST00000560565 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
CCDC33-209ENST00000560565 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
CCDC33-209ENST00000560565 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
CCDC33-209ENST00000560565 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
CCDC33-209ENST00000560565 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms