RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 A0A087WVE0 104 aa4.51□□□□□ -1.69
HERC1-209ENST00000560519 H1FX-AS1Q4G0G2 97 aa4.51□□□□□ -1.69
HERC1-209ENST00000560519 UQCRQO14949 82 aa4.49□□□□□ -1.69
HERC1-209ENST00000560519 IMUPQ9GZP8 106 aa4.49□□□□□ -1.69
HERC1-209ENST00000560519 NEBP20929 6669 aa4.49□□□□□ -1.69
HERC1-209ENST00000560519 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
HERC1-209ENST00000560519 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
HERC1-209ENST00000560519 ATOX1O00244 68 aa4.47□□□□□ -1.69
HERC1-209ENST00000560519 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
HERC1-209ENST00000560519 A6NN06 94 aa4.46□□□□□ -1.7
HERC1-209ENST00000560519 SCGB1A1P11684 91 aa4.46□□□□□ -1.7
HERC1-209ENST00000560519 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
HERC1-209ENST00000560519 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
HERC1-209ENST00000560519 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
HERC1-209ENST00000560519 H0Y9P7 68 aa4.43□□□□□ -1.7
HERC1-209ENST00000560519 MP68P56378 58 aa4.43□□□□□ -1.7
HERC1-209ENST00000560519 OCR1Q9BZK8 76 aa4.43□□□□□ -1.7
HERC1-209ENST00000560519 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
HERC1-209ENST00000560519 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
HERC1-209ENST00000560519 FAM236AA0A1B0GUQ0 79 aa4.41□□□□□ -1.7
HERC1-209ENST00000560519 FAM236BA0A1B0GV22 79 aa4.41□□□□□ -1.7
HERC1-209ENST00000560519 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
HERC1-209ENST00000560519 C5orf47Q569G3 176 aa4.41□□□□□ -1.7
HERC1-209ENST00000560519 Q5VV11 94 aa4.41□□□□□ -1.7
HERC1-209ENST00000560519 SMIM20Q8N5G0 67 aa4.4□□□□□ -1.71
HERC1-209ENST00000560519 H3BPC8 53 aa4.39□□□□□ -1.71
HERC1-209ENST00000560519 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
HERC1-209ENST00000560519 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
HERC1-209ENST00000560519 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
HERC1-209ENST00000560519 MT1BP07438 61 aa4.35□□□□□ -1.71
HERC1-209ENST00000560519 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
HERC1-209ENST00000560519 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
HERC1-209ENST00000560519 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
HERC1-209ENST00000560519 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
HERC1-209ENST00000560519 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
HERC1-209ENST00000560519 S4R3F8 94 aa4.32□□□□□ -1.72
HERC1-209ENST00000560519 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
HERC1-209ENST00000560519 A8MUN3 132 aa4.3□□□□□ -1.72
HERC1-209ENST00000560519 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
HERC1-209ENST00000560519 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
HERC1-209ENST00000560519 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
HERC1-209ENST00000560519 LCA10Q71F78 164 aa4.26□□□□□ -1.73
HERC1-209ENST00000560519 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
HERC1-209ENST00000560519 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
HERC1-209ENST00000560519 CRIPTQ9P021 101 aa4.24□□□□□ -1.73
HERC1-209ENST00000560519 NDUFC1O43677 76 aa4.22□□□□□ -1.73
HERC1-209ENST00000560519 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
HERC1-209ENST00000560519 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
HERC1-209ENST00000560519 DMAC1Q96GE9 116 aa4.21□□□□□ -1.74
HERC1-209ENST00000560519 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
HERC1-209ENST00000560519 KMT2DO14686 5537 aa4.21□□□□□ -1.74
HERC1-209ENST00000560519 COX7CP15954 63 aa4.19□□□□□ -1.74
HERC1-209ENST00000560519 SPRR2EP22531 72 aa4.18□□□□□ -1.74
HERC1-209ENST00000560519 SPRR2BP35325 72 aa4.18□□□□□ -1.74
HERC1-209ENST00000560519 SPRR2AP35326 72 aa4.18□□□□□ -1.74
HERC1-209ENST00000560519 ACYP2P14621 99 aa4.17□□□□□ -1.74
HERC1-209ENST00000560519 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
HERC1-209ENST00000560519 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
HERC1-209ENST00000560519 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
HERC1-209ENST00000560519 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.75
HERC1-209ENST00000560519 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
HERC1-209ENST00000560519 SPTSSBQ8NFR3 76 aa4.12□□□□□ -1.75
HERC1-209ENST00000560519 H0YAA0 97 aa4.11□□□□□ -1.75
HERC1-209ENST00000560519 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
HERC1-209ENST00000560519 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
HERC1-209ENST00000560519 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
HERC1-209ENST00000560519 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
HERC1-209ENST00000560519 H7BZZ5 65 aa4.06□□□□□ -1.76
HERC1-209ENST00000560519 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
HERC1-209ENST00000560519 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
HERC1-209ENST00000560519 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
HERC1-209ENST00000560519 SPRR2DP22532 72 aa4.04□□□□□ -1.76
HERC1-209ENST00000560519 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
HERC1-209ENST00000560519 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
HERC1-209ENST00000560519 CCDC179H3BU77 68 aa4.02□□□□□ -1.77
HERC1-209ENST00000560519 MT1XP80297 61 aa4.02□□□□□ -1.77
HERC1-209ENST00000560519 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
HERC1-209ENST00000560519 COA5Q86WW8 74 aa4.01□□□□□ -1.77
HERC1-209ENST00000560519 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
HERC1-209ENST00000560519 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
HERC1-209ENST00000560519 R4GN34 69 aa3.97□□□□□ -1.77
HERC1-209ENST00000560519 P0C880 135 aa3.96□□□□□ -1.78
HERC1-209ENST00000560519 M0QZ58 72 aa3.93□□□□□ -1.78
HERC1-209ENST00000560519 SEC61GP60059 68 aa3.93□□□□□ -1.78
HERC1-209ENST00000560519 TMEM258P61165 79 aa3.93□□□□□ -1.78
HERC1-209ENST00000560519 SERP1Q9Y6X1 66 aa3.91□□□□□ -1.78
HERC1-209ENST00000560519 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
HERC1-209ENST00000560519 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
HERC1-209ENST00000560519 A0A1B0GU69 56 aa3.83□□□□□ -1.8
HERC1-209ENST00000560519 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
HERC1-209ENST00000560519 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
HERC1-209ENST00000560519 A0A1B0GU33 70 aa3.8□□□□□ -1.8
HERC1-209ENST00000560519 PCP4P48539 62 aa3.78□□□□□ -1.8
HERC1-209ENST00000560519 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
HERC1-209ENST00000560519 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
HERC1-209ENST00000560519 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
HERC1-209ENST00000560519 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
HERC1-209ENST00000560519 SPATA8Q6RVD6 105 aa3.73□□□□□ -1.81
HERC1-209ENST00000560519 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
HERC1-209ENST00000560519 A0A0D9SG42 100 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms