RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ATP5EP2Q5VTU8 51 aa6.47□□□□□ -1.37
TPM1-223ENST00000560445 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
TPM1-223ENST00000560445 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
TPM1-223ENST00000560445 LCA10Q71F78 164 aa6.45□□□□□ -1.38
TPM1-223ENST00000560445 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
TPM1-223ENST00000560445 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
TPM1-223ENST00000560445 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
TPM1-223ENST00000560445 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
TPM1-223ENST00000560445 Q5VV11 94 aa6.41□□□□□ -1.38
TPM1-223ENST00000560445 ATOX1O00244 68 aa6.4□□□□□ -1.38
TPM1-223ENST00000560445 UQCRQO14949 82 aa6.39□□□□□ -1.39
TPM1-223ENST00000560445 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
TPM1-223ENST00000560445 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
TPM1-223ENST00000560445 CRIPTQ9P021 101 aa6.38□□□□□ -1.39
TPM1-223ENST00000560445 KLKP1Q107X0 134 aa6.37□□□□□ -1.39
TPM1-223ENST00000560445 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
TPM1-223ENST00000560445 A6NN06 94 aa6.36□□□□□ -1.39
TPM1-223ENST00000560445 LINC00643Q86TS7 51 aa6.35□□□□□ -1.39
TPM1-223ENST00000560445 H0Y9P7 68 aa6.34□□□□□ -1.39
TPM1-223ENST00000560445 IMUPQ9GZP8 106 aa6.34□□□□□ -1.39
TPM1-223ENST00000560445 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
TPM1-223ENST00000560445 NDUFC1O43677 76 aa6.31□□□□□ -1.4
TPM1-223ENST00000560445 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
TPM1-223ENST00000560445 A8MUN3 132 aa6.3□□□□□ -1.4
TPM1-223ENST00000560445 A0A087WVE0 104 aa6.28□□□□□ -1.4
TPM1-223ENST00000560445 MT1BP07438 61 aa6.28□□□□□ -1.4
TPM1-223ENST00000560445 MP68P56378 58 aa6.27□□□□□ -1.41
TPM1-223ENST00000560445 H0YAA0 97 aa6.26□□□□□ -1.41
TPM1-223ENST00000560445 J3QR89 54 aa6.25□□□□□ -1.41
TPM1-223ENST00000560445 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
TPM1-223ENST00000560445 A0A1B0GV90 55 aa6.23□□□□□ -1.41
TPM1-223ENST00000560445 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
TPM1-223ENST00000560445 OCR1Q9BZK8 76 aa6.18□□□□□ -1.42
TPM1-223ENST00000560445 SCGB1A1P11684 91 aa6.17□□□□□ -1.42
TPM1-223ENST00000560445 H3BPC8 53 aa6.15□□□□□ -1.42
TPM1-223ENST00000560445 C20orf197Q8N268 126 aa6.15□□□□□ -1.42
TPM1-223ENST00000560445 NEBP20929 6669 aa6.15□□□□□ -1.43
TPM1-223ENST00000560445 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
TPM1-223ENST00000560445 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
TPM1-223ENST00000560445 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
TPM1-223ENST00000560445 R4GN34 69 aa6.05□□□□□ -1.44
TPM1-223ENST00000560445 KRTAP5-9P26371 169 aa6.03□□□□□ -1.44
TPM1-223ENST00000560445 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
TPM1-223ENST00000560445 H3BS24 57 aa5.99□□□□□ -1.45
TPM1-223ENST00000560445 SMIM20Q8N5G0 67 aa5.99□□□□□ -1.45
TPM1-223ENST00000560445 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
TPM1-223ENST00000560445 K7ERU9 68 aa5.97□□□□□ -1.45
TPM1-223ENST00000560445 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
TPM1-223ENST00000560445 M0QZ58 72 aa5.96□□□□□ -1.46
TPM1-223ENST00000560445 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
TPM1-223ENST00000560445 SPTSSBQ8NFR3 76 aa5.95□□□□□ -1.46
TPM1-223ENST00000560445 ACYP2P14621 99 aa5.94□□□□□ -1.46
TPM1-223ENST00000560445 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
TPM1-223ENST00000560445 MT-ATP8P03928 68 aa5.91□□□□□ -1.46
TPM1-223ENST00000560445 P0C880 135 aa5.91□□□□□ -1.46
TPM1-223ENST00000560445 KMT2DO14686 5537 aa5.9□□□□□ -1.46
TPM1-223ENST00000560445 MT1XP80297 61 aa5.88□□□□□ -1.47
TPM1-223ENST00000560445 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
TPM1-223ENST00000560445 KRTAP12-2P59991 146 aa5.86□□□□□ -1.47
TPM1-223ENST00000560445 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
TPM1-223ENST00000560445 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
TPM1-223ENST00000560445 MDN1Q9NU22 5596 aa5.85□□□□□ -1.47
TPM1-223ENST00000560445 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
TPM1-223ENST00000560445 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
TPM1-223ENST00000560445 SPRR2EP22531 72 aa5.78□□□□□ -1.48
TPM1-223ENST00000560445 SPRR2BP35325 72 aa5.78□□□□□ -1.48
TPM1-223ENST00000560445 SPRR2AP35326 72 aa5.78□□□□□ -1.48
TPM1-223ENST00000560445 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
TPM1-223ENST00000560445 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
TPM1-223ENST00000560445 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
TPM1-223ENST00000560445 SERP2Q8N6R1 65 aa5.73□□□□□ -1.49
TPM1-223ENST00000560445 LCE1AQ5T7P2 110 aa5.65□□□□□ -1.5
TPM1-223ENST00000560445 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
TPM1-223ENST00000560445 SPRR2DP22532 72 aa5.61□□□□□ -1.51
TPM1-223ENST00000560445 SEC61GP60059 68 aa5.59□□□□□ -1.51
TPM1-223ENST00000560445 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
TPM1-223ENST00000560445 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
TPM1-223ENST00000560445 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
TPM1-223ENST00000560445 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
TPM1-223ENST00000560445 COA5Q86WW8 74 aa5.56□□□□□ -1.52
TPM1-223ENST00000560445 SERP1Q9Y6X1 66 aa5.56□□□□□ -1.52
TPM1-223ENST00000560445 COX7CP15954 63 aa5.54□□□□□ -1.52
TPM1-223ENST00000560445 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
TPM1-223ENST00000560445 H7BZZ5 65 aa5.42□□□□□ -1.54
TPM1-223ENST00000560445 A0A0D9SG42 100 aa5.41□□□□□ -1.54
TPM1-223ENST00000560445 A0A1B0GU33 70 aa5.41□□□□□ -1.54
TPM1-223ENST00000560445 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
TPM1-223ENST00000560445 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
TPM1-223ENST00000560445 ANAPC13Q9BS18 74 aa5.36□□□□□ -1.55
TPM1-223ENST00000560445 CYSTM1Q9H1C7 97 aa5.35□□□□□ -1.55
TPM1-223ENST00000560445 A0A1B0GU69 56 aa5.33□□□□□ -1.56
TPM1-223ENST00000560445 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
TPM1-223ENST00000560445 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
TPM1-223ENST00000560445 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
TPM1-223ENST00000560445 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
TPM1-223ENST00000560445 MT1EP04732 61 aa5.24□□□□□ -1.57
TPM1-223ENST00000560445 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
TPM1-223ENST00000560445 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
TPM1-223ENST00000560445 PP632Q6XCG6 107 aa5.19□□□□□ -1.58
TPM1-223ENST00000560445 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms