RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
RABGGTA-211ENST00000559850 MP68P56378 58 aa6.71□□□□□ -1.34
RABGGTA-211ENST00000559850 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
RABGGTA-211ENST00000559850 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
RABGGTA-211ENST00000559850 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
RABGGTA-211ENST00000559850 NDUFC1O43677 76 aa6.65□□□□□ -1.34
RABGGTA-211ENST00000559850 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
RABGGTA-211ENST00000559850 MT1BP07438 61 aa6.64□□□□□ -1.35
RABGGTA-211ENST00000559850 A8MUN3 132 aa6.63□□□□□ -1.35
RABGGTA-211ENST00000559850 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
RABGGTA-211ENST00000559850 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
RABGGTA-211ENST00000559850 Q5VV11 94 aa6.61□□□□□ -1.35
RABGGTA-211ENST00000559850 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
RABGGTA-211ENST00000559850 H3BPC8 53 aa6.59□□□□□ -1.35
RABGGTA-211ENST00000559850 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
RABGGTA-211ENST00000559850 K7ERU9 68 aa6.57□□□□□ -1.36
RABGGTA-211ENST00000559850 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
RABGGTA-211ENST00000559850 H0YAA0 97 aa6.53□□□□□ -1.36
RABGGTA-211ENST00000559850 CRIPTQ9P021 101 aa6.53□□□□□ -1.36
RABGGTA-211ENST00000559850 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
RABGGTA-211ENST00000559850 A6NN06 94 aa6.51□□□□□ -1.37
RABGGTA-211ENST00000559850 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
RABGGTA-211ENST00000559850 KRTAP10-5P60370 271 aa6.44□□□□□ -1.38
RABGGTA-211ENST00000559850 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
RABGGTA-211ENST00000559850 P0C880 135 aa6.43□□□□□ -1.38
RABGGTA-211ENST00000559850 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
RABGGTA-211ENST00000559850 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
RABGGTA-211ENST00000559850 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
RABGGTA-211ENST00000559850 ACYP2P14621 99 aa6.36□□□□□ -1.39
RABGGTA-211ENST00000559850 R4GN34 69 aa6.34□□□□□ -1.39
RABGGTA-211ENST00000559850 M0QZ58 72 aa6.32□□□□□ -1.4
RABGGTA-211ENST00000559850 C20orf197Q8N268 126 aa6.31□□□□□ -1.4
RABGGTA-211ENST00000559850 SERP2Q8N6R1 65 aa6.29□□□□□ -1.4
RABGGTA-211ENST00000559850 CHKB-CPT1BH3BT56 60 aa6.28□□□□□ -1.4
RABGGTA-211ENST00000559850 LINC01554Q52M75 96 aa6.26□□□□□ -1.41
RABGGTA-211ENST00000559850 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
RABGGTA-211ENST00000559850 MT1XP80297 61 aa6.24□□□□□ -1.41
RABGGTA-211ENST00000559850 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
RABGGTA-211ENST00000559850 SPANXA2-OT1Q8N9U9 137 aa6.22□□□□□ -1.41
RABGGTA-211ENST00000559850 NEBP20929 6669 aa6.19□□□□□ -1.42
RABGGTA-211ENST00000559850 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
RABGGTA-211ENST00000559850 COX7CP15954 63 aa6.12□□□□□ -1.43
RABGGTA-211ENST00000559850 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
RABGGTA-211ENST00000559850 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
RABGGTA-211ENST00000559850 COA5Q86WW8 74 aa6.1□□□□□ -1.43
RABGGTA-211ENST00000559850 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
RABGGTA-211ENST00000559850 KMT2DO14686 5537 aa6.09□□□□□ -1.43
RABGGTA-211ENST00000559850 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
RABGGTA-211ENST00000559850 H7BZZ5 65 aa6.02□□□□□ -1.45
RABGGTA-211ENST00000559850 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
RABGGTA-211ENST00000559850 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
RABGGTA-211ENST00000559850 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
RABGGTA-211ENST00000559850 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
RABGGTA-211ENST00000559850 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
RABGGTA-211ENST00000559850 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
RABGGTA-211ENST00000559850 ANAPC13Q9BS18 74 aa5.96□□□□□ -1.46
RABGGTA-211ENST00000559850 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
RABGGTA-211ENST00000559850 SEC61GP60059 68 aa5.91□□□□□ -1.46
RABGGTA-211ENST00000559850 SERP1Q9Y6X1 66 aa5.91□□□□□ -1.46
RABGGTA-211ENST00000559850 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
RABGGTA-211ENST00000559850 A0A0D9SG42 100 aa5.89□□□□□ -1.47
RABGGTA-211ENST00000559850 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
RABGGTA-211ENST00000559850 SPRR2EP22531 72 aa5.89□□□□□ -1.47
RABGGTA-211ENST00000559850 SPRR2BP35325 72 aa5.89□□□□□ -1.47
RABGGTA-211ENST00000559850 SPRR2AP35326 72 aa5.89□□□□□ -1.47
RABGGTA-211ENST00000559850 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
RABGGTA-211ENST00000559850 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
RABGGTA-211ENST00000559850 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
RABGGTA-211ENST00000559850 A0A1B0GU33 70 aa5.83□□□□□ -1.48
RABGGTA-211ENST00000559850 LCE1AQ5T7P2 110 aa5.81□□□□□ -1.48
RABGGTA-211ENST00000559850 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
RABGGTA-211ENST00000559850 A0A1B0GU69 56 aa5.77□□□□□ -1.49
RABGGTA-211ENST00000559850 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
RABGGTA-211ENST00000559850 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
RABGGTA-211ENST00000559850 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
RABGGTA-211ENST00000559850 A8MU10 97 aa5.7□□□□□ -1.5
RABGGTA-211ENST00000559850 SPRR2DP22532 72 aa5.69□□□□□ -1.5
RABGGTA-211ENST00000559850 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
RABGGTA-211ENST00000559850 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
RABGGTA-211ENST00000559850 TMEM258P61165 79 aa5.59□□□□□ -1.51
RABGGTA-211ENST00000559850 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
RABGGTA-211ENST00000559850 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
RABGGTA-211ENST00000559850 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
RABGGTA-211ENST00000559850 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
RABGGTA-211ENST00000559850 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
RABGGTA-211ENST00000559850 KRTAP2-1Q9BYU5 128 aa5.55□□□□□ -1.52
RABGGTA-211ENST00000559850 MT1EP04732 61 aa5.53□□□□□ -1.52
RABGGTA-211ENST00000559850 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
RABGGTA-211ENST00000559850 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
RABGGTA-211ENST00000559850 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
RABGGTA-211ENST00000559850 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
RABGGTA-211ENST00000559850 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
RABGGTA-211ENST00000559850 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
RABGGTA-211ENST00000559850 UQCR11O14957 56 aa5.4□□□□□ -1.54
RABGGTA-211ENST00000559850 TNP1P09430 55 aa5.4□□□□□ -1.54
RABGGTA-211ENST00000559850 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
RABGGTA-211ENST00000559850 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
RABGGTA-211ENST00000559850 PSPHP1O15172 72 aa5.32□□□□□ -1.56
RABGGTA-211ENST00000559850 MT1GP13640 62 aa5.3□□□□□ -1.56
RABGGTA-211ENST00000559850 MT1LQ93083 61 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms