RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
USP3-212ENST00000559276 IGHV6-1A0A0B4J1U7 121 aa3.32□□□□□ -1.88
USP3-212ENST00000559276 TPRXLQ17RH7 258 aa3.32□□□□□ -1.88
USP3-212ENST00000559276 KRTAP13-3Q3SY46 172 aa3.32□□□□□ -1.88
USP3-212ENST00000559276 SPAG11AQ6PDA7 123 aa3.32□□□□□ -1.88
USP3-212ENST00000559276 LINC00304Q8N9R0 145 aa3.31□□□□□ -1.88
USP3-212ENST00000559276 DMAC1Q96GE9 116 aa3.31□□□□□ -1.88
USP3-212ENST00000559276 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
USP3-212ENST00000559276 SSBP3-AS1Q7Z2R9 100 aa3.3□□□□□ -1.88
USP3-212ENST00000559276 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
USP3-212ENST00000559276 A8MU10 97 aa3.29□□□□□ -1.88
USP3-212ENST00000559276 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
USP3-212ENST00000559276 SPINK7P58062 85 aa3.27□□□□□ -1.89
USP3-212ENST00000559276 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
USP3-212ENST00000559276 A0A1B0GU69 56 aa3.25□□□□□ -1.89
USP3-212ENST00000559276 IGKV2-30P06310 120 aa3.25□□□□□ -1.89
USP3-212ENST00000559276 LCE2CQ5TA81 110 aa3.25□□□□□ -1.89
USP3-212ENST00000559276 UQCR11O14957 56 aa3.24□□□□□ -1.89
USP3-212ENST00000559276 LINC00313P59037 77 aa3.24□□□□□ -1.89
USP3-212ENST00000559276 KRTAP19-2Q3LHN2 52 aa3.24□□□□□ -1.89
USP3-212ENST00000559276 Q5W150 140 aa3.24□□□□□ -1.89
USP3-212ENST00000559276 NOTCH2NLQ7Z3S9 236 aa3.23□□□□□ -1.89
USP3-212ENST00000559276 MIR22HGQ0VDD5 57 aa3.21□□□□□ -1.9
USP3-212ENST00000559276 LCE2BO14633 110 aa3.2□□□□□ -1.9
USP3-212ENST00000559276 SPINK1P00995 79 aa3.2□□□□□ -1.9
USP3-212ENST00000559276 XP32Q5T750 250 aa3.2□□□□□ -1.9
USP3-212ENST00000559276 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
USP3-212ENST00000559276 IGKV2D-30A0A075B6S6 120 aa3.19□□□□□ -1.9
USP3-212ENST00000559276 RPS29P62273 56 aaKnown RBP3.19□□□□□ -1.9
USP3-212ENST00000559276 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
USP3-212ENST00000559276 MT1HP80294 61 aa3.18□□□□□ -1.9
USP3-212ENST00000559276 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
USP3-212ENST00000559276 LORP23490 312 aaPredicted RBP3.15□□□□□ -1.91
USP3-212ENST00000559276 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
USP3-212ENST00000559276 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
USP3-212ENST00000559276 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
USP3-212ENST00000559276 C9orf92A6NGG3 77 aa3.11□□□□□ -1.91
USP3-212ENST00000559276 A8MUU9 505 aa3.07□□□□□ -1.92
USP3-212ENST00000559276 ADM2Q7Z4H4 148 aa3.07□□□□□ -1.92
USP3-212ENST00000559276 K7ERS5 55 aa3.06□□□□□ -1.92
USP3-212ENST00000559276 RPL37P61927 97 aaKnown RBP3.06□□□□□ -1.92
USP3-212ENST00000559276 CSAG1Q6PB30 78 aa3.06□□□□□ -1.92
USP3-212ENST00000559276 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
USP3-212ENST00000559276 A0A1B0GU33 70 aa3.05□□□□□ -1.92
USP3-212ENST00000559276 USH2AO75445 5202 aa3.03□□□□□ -1.92
USP3-212ENST00000559276 H0YAA0 97 aa3.03□□□□□ -1.92
USP3-212ENST00000559276 KRTAP25-1Q3LHN0 102 aa3.03□□□□□ -1.92
USP3-212ENST00000559276 H1FX-AS1Q4G0G2 97 aa3.03□□□□□ -1.92
USP3-212ENST00000559276 SSPOA2VEC9 5147 aa3.03□□□□□ -1.93
USP3-212ENST00000559276 M0R2T5 61 aa3.02□□□□□ -1.93
USP3-212ENST00000559276 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
USP3-212ENST00000559276 KRTAP9-8Q9BYQ0 159 aa3.01□□□□□ -1.93
USP3-212ENST00000559276 COX6B2Q6YFQ2 88 aa2.99□□□□□ -1.93
USP3-212ENST00000559276 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
USP3-212ENST00000559276 ROMO1P60602 79 aa2.97□□□□□ -1.93
USP3-212ENST00000559276 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
USP3-212ENST00000559276 KRTAP3-1Q9BYR8 98 aa2.96□□□□□ -1.94
USP3-212ENST00000559276 MT2AP02795 61 aa2.94□□□□□ -1.94
USP3-212ENST00000559276 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
USP3-212ENST00000559276 MT1FP04733 61 aa2.92□□□□□ -1.94
USP3-212ENST00000559276 KRTAP19-1Q8IUB9 90 aa2.91□□□□□ -1.94
USP3-212ENST00000559276 KRTAP9-3Q9BYQ3 159 aa2.91□□□□□ -1.94
USP3-212ENST00000559276 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.95
USP3-212ENST00000559276 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.95
USP3-212ENST00000559276 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
USP3-212ENST00000559276 S4R3F8 94 aa2.85□□□□□ -1.95
USP3-212ENST00000559276 KRTAP10-10P60014 251 aa2.84□□□□□ -1.95
USP3-212ENST00000559276 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
USP3-212ENST00000559276 CRIPTQ9P021 101 aa2.83□□□□□ -1.96
USP3-212ENST00000559276 M0QZ58 72 aa2.82□□□□□ -1.96
USP3-212ENST00000559276 P0C880 135 aa2.8□□□□□ -1.96
USP3-212ENST00000559276 KRTAP13-4Q3LI77 160 aa2.8□□□□□ -1.96
USP3-212ENST00000559276 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
USP3-212ENST00000559276 A0A0D9SG42 100 aa2.78□□□□□ -1.96
USP3-212ENST00000559276 KRTAP15-1Q3LI76 137 aa2.77□□□□□ -1.97
USP3-212ENST00000559276 KRTAP12-1P59990 96 aa2.76□□□□□ -1.97
USP3-212ENST00000559276 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
USP3-212ENST00000559276 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
USP3-212ENST00000559276 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
USP3-212ENST00000559276 NEBP20929 6669 aa2.72□□□□□ -1.97
USP3-212ENST00000559276 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
USP3-212ENST00000559276 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
USP3-212ENST00000559276 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
USP3-212ENST00000559276 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
USP3-212ENST00000559276 MT1BP07438 61 aa2.66□□□□□ -1.98
USP3-212ENST00000559276 R4GN34 69 aa2.65□□□□□ -1.99
USP3-212ENST00000559276 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
USP3-212ENST00000559276 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
USP3-212ENST00000559276 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
USP3-212ENST00000559276 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
USP3-212ENST00000559276 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
USP3-212ENST00000559276 KMT2DO14686 5537 aa2.59□□□□□ -1.99
USP3-212ENST00000559276 KRTAP10-5P60370 271 aa2.59□□□□□ -1.99
USP3-212ENST00000559276 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
USP3-212ENST00000559276 TNP1P09430 55 aa2.49□□□□□ -2.01
USP3-212ENST00000559276 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
USP3-212ENST00000559276 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
USP3-212ENST00000559276 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
USP3-212ENST00000559276 SPRR2FQ96RM1 72 aa2.46□□□□□ -2.02
USP3-212ENST00000559276 MT1XP80297 61 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms