RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
PBX1-215ENST00000559240 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.94
PBX1-215ENST00000559240 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
PBX1-215ENST00000559240 Q5W150 140 aa9.13□□□□□ -0.95
PBX1-215ENST00000559240 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
PBX1-215ENST00000559240 MYCBP2O75592 4640 aa9.1□□□□□ -0.95
PBX1-215ENST00000559240 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
PBX1-215ENST00000559240 A0A1B0GVX0 72 aa9.06□□□□□ -0.96
PBX1-215ENST00000559240 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
PBX1-215ENST00000559240 C20orf166-AS1Q96NR2 134 aa9.06□□□□□ -0.96
PBX1-215ENST00000559240 J3QL48 77 aa9.02□□□□□ -0.97
PBX1-215ENST00000559240 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
PBX1-215ENST00000559240 H0YAA0 97 aa8.93□□□□□ -0.98
PBX1-215ENST00000559240 PCLOQ9Y6V0 5065 aa8.91□□□□□ -0.98
PBX1-215ENST00000559240 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
PBX1-215ENST00000559240 TPRXLQ17RH7 258 aa8.87□□□□□ -0.99
PBX1-215ENST00000559240 LUZP6Q538Z0 58 aa8.82□□□□□ -1
PBX1-215ENST00000559240 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
PBX1-215ENST00000559240 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
PBX1-215ENST00000559240 XP32Q5T750 250 aa8.76□□□□□ -1.01
PBX1-215ENST00000559240 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.02
PBX1-215ENST00000559240 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
PBX1-215ENST00000559240 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
PBX1-215ENST00000559240 C10orf95Q9H7T3 257 aa8.68□□□□□ -1.02
PBX1-215ENST00000559240 A0A1B0GU33 70 aa8.66□□□□□ -1.02
PBX1-215ENST00000559240 K7ERS5 55 aa8.61□□□□□ -1.03
PBX1-215ENST00000559240 HMCN2Q8NDA2 5059 aa8.59□□□□□ -1.03
PBX1-215ENST00000559240 HERC1Q15751 4861 aa8.56□□□□□ -1.04
PBX1-215ENST00000559240 H1FX-AS1Q4G0G2 97 aa8.55□□□□□ -1.04
PBX1-215ENST00000559240 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
PBX1-215ENST00000559240 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
PBX1-215ENST00000559240 LPAP08519 4548 aa8.51□□□□□ -1.05
PBX1-215ENST00000559240 LRP2P98164 4655 aa8.44□□□□□ -1.06
PBX1-215ENST00000559240 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
PBX1-215ENST00000559240 A0A0D9SG42 100 aa8.34□□□□□ -1.07
PBX1-215ENST00000559240 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
PBX1-215ENST00000559240 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
PBX1-215ENST00000559240 KRTAP3-1Q9BYR8 98 aa8.15□□□□□ -1.1
PBX1-215ENST00000559240 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.11
PBX1-215ENST00000559240 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
PBX1-215ENST00000559240 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
PBX1-215ENST00000559240 S4R3F8 94 aa8□□□□□ -1.13
PBX1-215ENST00000559240 LCE2CQ5TA81 110 aa8□□□□□ -1.13
PBX1-215ENST00000559240 KRTAP12-2P59991 146 aa7.96□□□□□ -1.13
PBX1-215ENST00000559240 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
PBX1-215ENST00000559240 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
PBX1-215ENST00000559240 MUC2Q02817 5179 aa7.92□□□□□ -1.14
PBX1-215ENST00000559240 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
PBX1-215ENST00000559240 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
PBX1-215ENST00000559240 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
PBX1-215ENST00000559240 MT1HP80294 61 aa7.82□□□□□ -1.16
PBX1-215ENST00000559240 FAT4Q6V0I7 4981 aa7.77□□□□□ -1.17
PBX1-215ENST00000559240 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
PBX1-215ENST00000559240 LCE2AQ5TA79 106 aaPredicted RBP7.7□□□□□ -1.18
PBX1-215ENST00000559240 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
PBX1-215ENST00000559240 M0R2T5 61 aa7.61□□□□□ -1.19
PBX1-215ENST00000559240 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
PBX1-215ENST00000559240 KRTAP9-8Q9BYQ0 159 aa7.53□□□□□ -1.2
PBX1-215ENST00000559240 MT2AP02795 61 aa7.47□□□□□ -1.21
PBX1-215ENST00000559240 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.21
PBX1-215ENST00000559240 MT1FP04733 61 aa7.4□□□□□ -1.23
PBX1-215ENST00000559240 M0QZ58 72 aa7.36□□□□□ -1.23
PBX1-215ENST00000559240 R4GN34 69 aa7.34□□□□□ -1.23
PBX1-215ENST00000559240 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
PBX1-215ENST00000559240 SPRR2GQ9BYE4 73 aa7.3□□□□□ -1.24
PBX1-215ENST00000559240 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
PBX1-215ENST00000559240 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
PBX1-215ENST00000559240 KRTAP19-8Q3LI54 63 aa7.16□□□□□ -1.26
PBX1-215ENST00000559240 LCE2DQ5TA82 110 aaPredicted RBP7.12□□□□□ -1.27
PBX1-215ENST00000559240 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
PBX1-215ENST00000559240 LCE2BO14633 110 aa7.05□□□□□ -1.28
PBX1-215ENST00000559240 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
PBX1-215ENST00000559240 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
PBX1-215ENST00000559240 INE1O15225 51 aa7.01□□□□□ -1.29
PBX1-215ENST00000559240 MT1BP07438 61 aa7.01□□□□□ -1.29
PBX1-215ENST00000559240 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
PBX1-215ENST00000559240 USH2AO75445 5202 aa6.82□□□□□ -1.32
PBX1-215ENST00000559240 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
PBX1-215ENST00000559240 MT1XP80297 61 aa6.73□□□□□ -1.33
PBX1-215ENST00000559240 KRTAP10-5P60370 271 aa6.72□□□□□ -1.33
PBX1-215ENST00000559240 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
PBX1-215ENST00000559240 SSPOA2VEC9 5147 aa6.65□□□□□ -1.34
PBX1-215ENST00000559240 TNP1P09430 55 aa6.59□□□□□ -1.35
PBX1-215ENST00000559240 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
PBX1-215ENST00000559240 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
PBX1-215ENST00000559240 KRTAP10-7P60409 375 aaPredicted RBP6.39□□□□□ -1.39
PBX1-215ENST00000559240 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
PBX1-215ENST00000559240 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
PBX1-215ENST00000559240 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
PBX1-215ENST00000559240 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
PBX1-215ENST00000559240 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
PBX1-215ENST00000559240 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
PBX1-215ENST00000559240 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
PBX1-215ENST00000559240 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
PBX1-215ENST00000559240 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
PBX1-215ENST00000559240 KRTAP5-9P26371 169 aa6□□□□□ -1.45
PBX1-215ENST00000559240 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
PBX1-215ENST00000559240 KRTAP19-5Q3LI72 72 aa6□□□□□ -1.45
PBX1-215ENST00000559240 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
PBX1-215ENST00000559240 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms