RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
SNRPA1-206ENST00000558059 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
SNRPA1-206ENST00000558059 ACYP1P07311 99 aa4.04□□□□□ -1.76
SNRPA1-206ENST00000558059 S4R3F8 94 aa4.04□□□□□ -1.76
SNRPA1-206ENST00000558059 LCA10Q71F78 164 aa4.03□□□□□ -1.76
SNRPA1-206ENST00000558059 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
SNRPA1-206ENST00000558059 FAM240AA0A1B0GVK7 77 aa4.02□□□□□ -1.77
SNRPA1-206ENST00000558059 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
SNRPA1-206ENST00000558059 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
SNRPA1-206ENST00000558059 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
SNRPA1-206ENST00000558059 ATP5EP2Q5VTU8 51 aa4□□□□□ -1.77
SNRPA1-206ENST00000558059 TRAV22A0A0B4J277 110 aa3.99□□□□□ -1.77
SNRPA1-206ENST00000558059 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
SNRPA1-206ENST00000558059 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
SNRPA1-206ENST00000558059 LOC101927531A0A1B0GV80 90 aa3.98□□□□□ -1.77
SNRPA1-206ENST00000558059 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
SNRPA1-206ENST00000558059 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
SNRPA1-206ENST00000558059 A0A087WVE0 104 aa3.97□□□□□ -1.77
SNRPA1-206ENST00000558059 HIST1H4AP62805 103 aaKnown RBP3.97□□□□□ -1.77
SNRPA1-206ENST00000558059 UQCRQO14949 82 aa3.96□□□□□ -1.78
SNRPA1-206ENST00000558059 MT1BP07438 61 aa3.95□□□□□ -1.78
SNRPA1-206ENST00000558059 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
SNRPA1-206ENST00000558059 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
SNRPA1-206ENST00000558059 SYNE2Q8WXH0 6885 aaKnown RBP3.94□□□□□ -1.78
SNRPA1-206ENST00000558059 H0Y9P7 68 aa3.94□□□□□ -1.78
SNRPA1-206ENST00000558059 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
SNRPA1-206ENST00000558059 A0A1B0GV90 55 aa3.93□□□□□ -1.78
SNRPA1-206ENST00000558059 ATOX1O00244 68 aa3.93□□□□□ -1.78
SNRPA1-206ENST00000558059 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
SNRPA1-206ENST00000558059 Q5VV11 94 aa3.91□□□□□ -1.78
SNRPA1-206ENST00000558059 OCR1Q9BZK8 76 aa3.89□□□□□ -1.79
SNRPA1-206ENST00000558059 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
SNRPA1-206ENST00000558059 A6NN06 94 aa3.87□□□□□ -1.79
SNRPA1-206ENST00000558059 NDUFC1O43677 76 aa3.87□□□□□ -1.79
SNRPA1-206ENST00000558059 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
SNRPA1-206ENST00000558059 IMUPQ9GZP8 106 aa3.87□□□□□ -1.79
SNRPA1-206ENST00000558059 A8MUN3 132 aa3.86□□□□□ -1.79
SNRPA1-206ENST00000558059 CRIPTQ9P021 101 aa3.86□□□□□ -1.79
SNRPA1-206ENST00000558059 H0YAA0 97 aa3.85□□□□□ -1.79
SNRPA1-206ENST00000558059 MP68P56378 58 aa3.85□□□□□ -1.79
SNRPA1-206ENST00000558059 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
SNRPA1-206ENST00000558059 J3QR89 54 aa3.82□□□□□ -1.8
SNRPA1-206ENST00000558059 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
SNRPA1-206ENST00000558059 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
SNRPA1-206ENST00000558059 H3BPC8 53 aa3.8□□□□□ -1.8
SNRPA1-206ENST00000558059 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
SNRPA1-206ENST00000558059 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
SNRPA1-206ENST00000558059 DMAC1Q96GE9 116 aa3.76□□□□□ -1.81
SNRPA1-206ENST00000558059 P0C880 135 aa3.74□□□□□ -1.81
SNRPA1-206ENST00000558059 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
SNRPA1-206ENST00000558059 NEBP20929 6669 aa3.72□□□□□ -1.81
SNRPA1-206ENST00000558059 MT-ATP8P03928 68 aa3.72□□□□□ -1.81
SNRPA1-206ENST00000558059 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
SNRPA1-206ENST00000558059 MT1XP80297 61 aa3.7□□□□□ -1.82
SNRPA1-206ENST00000558059 KMT2DO14686 5537 aa3.7□□□□□ -1.82
SNRPA1-206ENST00000558059 TRAV7A0A075B6U4 112 aa3.69□□□□□ -1.82
SNRPA1-206ENST00000558059 C20orf197Q8N268 126 aa3.69□□□□□ -1.82
SNRPA1-206ENST00000558059 R4GN34 69 aa3.69□□□□□ -1.82
SNRPA1-206ENST00000558059 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
SNRPA1-206ENST00000558059 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
SNRPA1-206ENST00000558059 K7ERU9 68 aa3.67□□□□□ -1.82
SNRPA1-206ENST00000558059 M0QZ58 72 aa3.67□□□□□ -1.82
SNRPA1-206ENST00000558059 SMIM20Q8N5G0 67 aa3.67□□□□□ -1.82
SNRPA1-206ENST00000558059 ACYP2P14621 99 aa3.66□□□□□ -1.82
SNRPA1-206ENST00000558059 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
SNRPA1-206ENST00000558059 LINC01554Q52M75 96 aa3.61□□□□□ -1.83
SNRPA1-206ENST00000558059 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
SNRPA1-206ENST00000558059 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
SNRPA1-206ENST00000558059 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
SNRPA1-206ENST00000558059 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SNRPA1-206ENST00000558059 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
SNRPA1-206ENST00000558059 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
SNRPA1-206ENST00000558059 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
SNRPA1-206ENST00000558059 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
SNRPA1-206ENST00000558059 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SNRPA1-206ENST00000558059 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
SNRPA1-206ENST00000558059 SPRR2EP22531 72 aa3.52□□□□□ -1.85
SNRPA1-206ENST00000558059 SPRR2BP35325 72 aa3.52□□□□□ -1.85
SNRPA1-206ENST00000558059 SPRR2AP35326 72 aa3.52□□□□□ -1.85
SNRPA1-206ENST00000558059 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
SNRPA1-206ENST00000558059 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
SNRPA1-206ENST00000558059 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
SNRPA1-206ENST00000558059 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
SNRPA1-206ENST00000558059 COA5Q86WW8 74 aa3.46□□□□□ -1.86
SNRPA1-206ENST00000558059 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
SNRPA1-206ENST00000558059 COX7CP15954 63 aa3.44□□□□□ -1.86
SNRPA1-206ENST00000558059 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
SNRPA1-206ENST00000558059 CYSTM1Q9H1C7 97 aa3.41□□□□□ -1.86
SNRPA1-206ENST00000558059 H7BZZ5 65 aa3.4□□□□□ -1.87
SNRPA1-206ENST00000558059 SPRR2DP22532 72 aa3.4□□□□□ -1.87
SNRPA1-206ENST00000558059 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
SNRPA1-206ENST00000558059 SEC61GP60059 68 aa3.38□□□□□ -1.87
SNRPA1-206ENST00000558059 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
SNRPA1-206ENST00000558059 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
SNRPA1-206ENST00000558059 A0A0D9SG42 100 aa3.36□□□□□ -1.87
SNRPA1-206ENST00000558059 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
SNRPA1-206ENST00000558059 A0A1B0GU33 70 aa3.35□□□□□ -1.87
SNRPA1-206ENST00000558059 KRTAP12-1P59990 96 aa3.31□□□□□ -1.88
SNRPA1-206ENST00000558059 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
SNRPA1-206ENST00000558059 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms