RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KRTAP19-8Q3LI54 63 aa6.1□□□□□ -1.43
SNRPA1-204ENST00000558020 KLKP1Q107X0 134 aa6.09□□□□□ -1.43
SNRPA1-204ENST00000558020 J3QR89 54 aa6.08□□□□□ -1.44
SNRPA1-204ENST00000558020 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
SNRPA1-204ENST00000558020 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
SNRPA1-204ENST00000558020 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
SNRPA1-204ENST00000558020 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
SNRPA1-204ENST00000558020 KRTAP10-5P60370 271 aa6.04□□□□□ -1.44
SNRPA1-204ENST00000558020 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
SNRPA1-204ENST00000558020 IMUPQ9GZP8 106 aa6.01□□□□□ -1.45
SNRPA1-204ENST00000558020 TRAV22A0A0B4J277 110 aa6□□□□□ -1.45
SNRPA1-204ENST00000558020 SVIPQ8NHG7 77 aa6□□□□□ -1.45
SNRPA1-204ENST00000558020 NEBP20929 6669 aa6□□□□□ -1.45
SNRPA1-204ENST00000558020 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
SNRPA1-204ENST00000558020 NDUFC1O43677 76 aa5.96□□□□□ -1.46
SNRPA1-204ENST00000558020 A0A087WVE0 104 aa5.95□□□□□ -1.46
SNRPA1-204ENST00000558020 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
SNRPA1-204ENST00000558020 ATOX1O00244 68 aa5.93□□□□□ -1.46
SNRPA1-204ENST00000558020 UQCRQO14949 82 aa5.93□□□□□ -1.46
SNRPA1-204ENST00000558020 H0YAA0 97 aa5.91□□□□□ -1.46
SNRPA1-204ENST00000558020 K7ERU9 68 aa5.91□□□□□ -1.46
SNRPA1-204ENST00000558020 KRTAP5-9P26371 169 aa5.91□□□□□ -1.46
SNRPA1-204ENST00000558020 H0Y9P7 68 aa5.89□□□□□ -1.47
SNRPA1-204ENST00000558020 KRTAP20-1Q3LI63 56 aa5.89□□□□□ -1.47
SNRPA1-204ENST00000558020 A8MUN3 132 aa5.87□□□□□ -1.47
SNRPA1-204ENST00000558020 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
SNRPA1-204ENST00000558020 MP68P56378 58 aa5.85□□□□□ -1.47
SNRPA1-204ENST00000558020 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
SNRPA1-204ENST00000558020 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
SNRPA1-204ENST00000558020 KMT2DO14686 5537 aa5.82□□□□□ -1.48
SNRPA1-204ENST00000558020 OCR1Q9BZK8 76 aa5.82□□□□□ -1.48
SNRPA1-204ENST00000558020 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
SNRPA1-204ENST00000558020 PLAC4Q8WY50 150 aa5.8□□□□□ -1.48
SNRPA1-204ENST00000558020 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
SNRPA1-204ENST00000558020 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
SNRPA1-204ENST00000558020 MT-ATP8P03928 68 aa5.78□□□□□ -1.48
SNRPA1-204ENST00000558020 H3BPC8 53 aa5.76□□□□□ -1.49
SNRPA1-204ENST00000558020 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
SNRPA1-204ENST00000558020 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
SNRPA1-204ENST00000558020 R4GN34 69 aa5.74□□□□□ -1.49
SNRPA1-204ENST00000558020 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
SNRPA1-204ENST00000558020 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
SNRPA1-204ENST00000558020 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
SNRPA1-204ENST00000558020 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
SNRPA1-204ENST00000558020 MT1XP80297 61 aa5.69□□□□□ -1.5
SNRPA1-204ENST00000558020 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
SNRPA1-204ENST00000558020 SPRR2EP22531 72 aa5.67□□□□□ -1.5
SNRPA1-204ENST00000558020 SPRR2BP35325 72 aa5.67□□□□□ -1.5
SNRPA1-204ENST00000558020 SPRR2AP35326 72 aa5.67□□□□□ -1.5
SNRPA1-204ENST00000558020 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
SNRPA1-204ENST00000558020 M0QZ58 72 aa5.65□□□□□ -1.5
SNRPA1-204ENST00000558020 P0C880 135 aa5.63□□□□□ -1.51
SNRPA1-204ENST00000558020 KRTAP12-2P59991 146 aa5.63□□□□□ -1.51
SNRPA1-204ENST00000558020 LINC01554Q52M75 96 aa5.59□□□□□ -1.51
SNRPA1-204ENST00000558020 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
SNRPA1-204ENST00000558020 KRTAP9-9Q9BYP9 154 aa5.58□□□□□ -1.52
SNRPA1-204ENST00000558020 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
SNRPA1-204ENST00000558020 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
SNRPA1-204ENST00000558020 SERP2Q8N6R1 65 aa5.55□□□□□ -1.52
SNRPA1-204ENST00000558020 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
SNRPA1-204ENST00000558020 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
SNRPA1-204ENST00000558020 SNURFQ9Y675 71 aa5.53□□□□□ -1.52
SNRPA1-204ENST00000558020 ACYP2P14621 99 aa5.52□□□□□ -1.53
SNRPA1-204ENST00000558020 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
SNRPA1-204ENST00000558020 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SNRPA1-204ENST00000558020 SPRR2DP22532 72 aa5.49□□□□□ -1.53
SNRPA1-204ENST00000558020 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
SNRPA1-204ENST00000558020 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
SNRPA1-204ENST00000558020 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
SNRPA1-204ENST00000558020 COX7CP15954 63 aa5.43□□□□□ -1.54
SNRPA1-204ENST00000558020 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
SNRPA1-204ENST00000558020 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-204ENST00000558020 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
SNRPA1-204ENST00000558020 ANAPC13Q9BS18 74 aa5.35□□□□□ -1.55
SNRPA1-204ENST00000558020 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
SNRPA1-204ENST00000558020 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
SNRPA1-204ENST00000558020 H7BZZ5 65 aa5.28□□□□□ -1.56
SNRPA1-204ENST00000558020 COA5Q86WW8 74 aa5.28□□□□□ -1.56
SNRPA1-204ENST00000558020 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
SNRPA1-204ENST00000558020 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
SNRPA1-204ENST00000558020 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
SNRPA1-204ENST00000558020 CCDC179H3BU77 68 aa5.19□□□□□ -1.58
SNRPA1-204ENST00000558020 SEC61GP60059 68 aa5.19□□□□□ -1.58
SNRPA1-204ENST00000558020 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
SNRPA1-204ENST00000558020 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
SNRPA1-204ENST00000558020 SERP1Q9Y6X1 66 aa5.16□□□□□ -1.58
SNRPA1-204ENST00000558020 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
SNRPA1-204ENST00000558020 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
SNRPA1-204ENST00000558020 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
SNRPA1-204ENST00000558020 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
SNRPA1-204ENST00000558020 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
SNRPA1-204ENST00000558020 A0A0D9SG42 100 aa5.06□□□□□ -1.6
SNRPA1-204ENST00000558020 MT1EP04732 61 aa5.06□□□□□ -1.6
SNRPA1-204ENST00000558020 TMEM258P61165 79 aa5.05□□□□□ -1.6
SNRPA1-204ENST00000558020 A0A1B0GU69 56 aa5.04□□□□□ -1.6
SNRPA1-204ENST00000558020 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
SNRPA1-204ENST00000558020 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
SNRPA1-204ENST00000558020 A0A1B0GU33 70 aa5.02□□□□□ -1.61
SNRPA1-204ENST00000558020 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
SNRPA1-204ENST00000558020 GPR98Q8WXG9 6306 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms