RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PDZD2O15018 2839 aa0.94□□□□□ -2.26
TDP1-217ENST00000557782 SONP18583 2426 aaKnown RBP0.93□□□□□ -2.26
TDP1-217ENST00000557782 ENHOQ6UWT2 76 aa0.93□□□□□ -2.26
TDP1-217ENST00000557782 UBL5Q9BZL1 73 aa0.93□□□□□ -2.26
TDP1-217ENST00000557782 ITPR2Q14571 2701 aa0.93□□□□□ -2.26
TDP1-217ENST00000557782 CSMD2Q7Z408 3487 aa0.92□□□□□ -2.26
TDP1-217ENST00000557782 NREPQ16612 68 aa0.92□□□□□ -2.26
TDP1-217ENST00000557782 SPINK6Q6UWN8 80 aa0.92□□□□□ -2.26
TDP1-217ENST00000557782 KIAA1109Q2LD37 5005 aa0.92□□□□□ -2.26
TDP1-217ENST00000557782 NBPF19A0A087WUL8 3843 aa0.92□□□□□ -2.26
TDP1-217ENST00000557782 NSD1Q96L73 2696 aaPredicted RBP0.92□□□□□ -2.26
TDP1-217ENST00000557782 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
TDP1-217ENST00000557782 CUBNO60494 3623 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 TGP01266 2768 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 A0A096LPF7 62 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 LCE6AA0A183 80 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 DEFB130BP0DP73 79 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 DEFB130AP0DP74 79 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 Q5VSD8 79 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 C6orf48Q9UBA6 75 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
TDP1-217ENST00000557782 RYR1P21817 5038 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 TENM2Q9NT68 2774 aa0.91□□□□□ -2.26
TDP1-217ENST00000557782 MEGF8Q7Z7M0 2845 aa0.9□□□□□ -2.26
TDP1-217ENST00000557782 DEFB4AO15263 64 aa0.9□□□□□ -2.27
TDP1-217ENST00000557782 DEFB135Q30KP9 77 aa0.9□□□□□ -2.27
TDP1-217ENST00000557782 LELP1Q5T871 98 aa0.9□□□□□ -2.27
TDP1-217ENST00000557782 ACANP16112 2415 aa0.9□□□□□ -2.27
TDP1-217ENST00000557782 OTOGQ6ZRI0 2925 aa0.9□□□□□ -2.27
TDP1-217ENST00000557782 IGLV5-48A0A075B6I7 105 aa0.89□□□□□ -2.27
TDP1-217ENST00000557782 WFDC10BQ8IUB3 73 aa0.89□□□□□ -2.27
TDP1-217ENST00000557782 ANK3Q12955 4377 aaKnown RBP0.89□□□□□ -2.27
TDP1-217ENST00000557782 ANK2Q01484 3957 aa0.89□□□□□ -2.27
TDP1-217ENST00000557782 DNAH3Q8TD57 4116 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 KRTAP5-8O75690 187 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 HTN3P15516 51 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 SPRR1AP35321 89 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 KCNQ1DNQ9H478 68 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 CRCT1Q9UGL9 99 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 KMT2CQ8NEZ4 4911 aaKnown RBP0.88□□□□□ -2.27
TDP1-217ENST00000557782 TRRAPQ9Y4A5 3859 aa0.88□□□□□ -2.27
TDP1-217ENST00000557782 ETDCA0A1B0GVM5 59 aa0.87□□□□□ -2.27
TDP1-217ENST00000557782 H3BNG1 76 aa0.87□□□□□ -2.27
TDP1-217ENST00000557782 SPART-AS1P0CW21 52 aa0.87□□□□□ -2.27
TDP1-217ENST00000557782 LINC01556Q5JQF7 62 aa0.87□□□□□ -2.27
TDP1-217ENST00000557782 MRPL34Q9BQ48 92 aaKnown RBP0.87□□□□□ -2.27
TDP1-217ENST00000557782 MUC2Q02817 5179 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 CMYA5Q8N3K9 4069 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 SPRR1BP22528 89 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 WFDC13Q8IUB5 93 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 DEFB105AQ8NG35 78 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 SMR3AQ99954 134 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 EPPK1P58107 5090 aaKnown RBP0.86□□□□□ -2.27
TDP1-217ENST00000557782 SRRM2Q9UQ35 2752 aaKnown RBP0.86□□□□□ -2.27
TDP1-217ENST00000557782 COL7A1Q02388 2944 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
TDP1-217ENST00000557782 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
TDP1-217ENST00000557782 A0A096LNI7 61 aa0.85□□□□□ -2.27
TDP1-217ENST00000557782 PRLHP81277 87 aa0.85□□□□□ -2.27
TDP1-217ENST00000557782 DNAH1Q9P2D7 4330 aa0.85□□□□□ -2.27
TDP1-217ENST00000557782 HYDINQ4G0P3 5121 aa0.85□□□□□ -2.27
TDP1-217ENST00000557782 ALMS1Q8TCU4 4167 aa0.85□□□□□ -2.27
TDP1-217ENST00000557782 DEFB131BA0A096LNP1 70 aa0.84□□□□□ -2.27
TDP1-217ENST00000557782 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.27
TDP1-217ENST00000557782 LYSTQ99698 3801 aa0.84□□□□□ -2.28
TDP1-217ENST00000557782 DNAH10Q8IVF4 4471 aa0.83□□□□□ -2.28
TDP1-217ENST00000557782 STAB2Q8WWQ8 2551 aa0.83□□□□□ -2.28
TDP1-217ENST00000557782 APLNQ9ULZ1 77 aa0.83□□□□□ -2.28
TDP1-217ENST00000557782 RYR2Q92736 4967 aa0.83□□□□□ -2.28
TDP1-217ENST00000557782 HERC2O95714 4834 aa0.83□□□□□ -2.28
TDP1-217ENST00000557782 DMBT1Q9UGM3 2413 aaPredicted RBP0.83□□□□□ -2.28
TDP1-217ENST00000557782 HECTD4Q9Y4D8 3996 aa0.82□□□□□ -2.28
TDP1-217ENST00000557782 CSMD3Q7Z407 3707 aa0.82□□□□□ -2.28
TDP1-217ENST00000557782 DNAH9Q9NYC9 4486 aa0.82□□□□□ -2.28
TDP1-217ENST00000557782 DNAH7Q8WXX0 4024 aa0.82□□□□□ -2.28
TDP1-217ENST00000557782 DYNC2H1Q8NCM8 4307 aaKnown RBP0.82□□□□□ -2.28
TDP1-217ENST00000557782 PRKDCP78527 4128 aaKnown RBP0.82□□□□□ -2.28
TDP1-217ENST00000557782 NEBP20929 6669 aa0.81□□□□□ -2.28
TDP1-217ENST00000557782 STARD9Q9P2P6 4700 aa0.81□□□□□ -2.28
TDP1-217ENST00000557782 HUWE1Q7Z6Z7 4374 aaKnown RBP0.8□□□□□ -2.28
TDP1-217ENST00000557782 SPINK1P00995 79 aa0.8□□□□□ -2.28
TDP1-217ENST00000557782 KRTAP20-1Q3LI63 56 aa0.8□□□□□ -2.28
TDP1-217ENST00000557782 COX6B2Q6YFQ2 88 aa0.8□□□□□ -2.28
TDP1-217ENST00000557782 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
TDP1-217ENST00000557782 DNAH17Q9UFH2 4485 aa0.79□□□□□ -2.28
TDP1-217ENST00000557782 SYNE2Q8WXH0 6885 aaKnown RBP0.79□□□□□ -2.28
TDP1-217ENST00000557782 DNAH6Q9C0G6 4158 aa0.79□□□□□ -2.28
TDP1-217ENST00000557782 VPS13DQ5THJ4 4388 aa0.79□□□□□ -2.28
TDP1-217ENST00000557782 ABCA13Q86UQ4 5058 aa0.79□□□□□ -2.28
TDP1-217ENST00000557782 PLECQ15149 4684 aaKnown RBP0.79□□□□□ -2.28
TDP1-217ENST00000557782 DNAH8Q96JB1 4490 aa0.78□□□□□ -2.28
TDP1-217ENST00000557782 MACF1Q9UPN3 7388 aaKnown RBP0.77□□□□□ -2.29
TDP1-217ENST00000557782 HERC1Q15751 4861 aa0.77□□□□□ -2.29
TDP1-217ENST00000557782 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
TDP1-217ENST00000557782 H1FX-AS1Q4G0G2 97 aa0.77□□□□□ -2.29
TDP1-217ENST00000557782 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
TDP1-217ENST00000557782 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
TDP1-217ENST00000557782 DNAH11Q96DT5 4516 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms