RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 SPRR2FQ96RM1 72 aa7.31□□□□□ -1.24
NEDD1-210ENST00000557400 A0A087WVE0 104 aa7.3□□□□□ -1.24
NEDD1-210ENST00000557400 SPRR2EP22531 72 aa7.29□□□□□ -1.24
NEDD1-210ENST00000557400 SPRR2BP35325 72 aa7.29□□□□□ -1.24
NEDD1-210ENST00000557400 SPRR2AP35326 72 aa7.29□□□□□ -1.24
NEDD1-210ENST00000557400 CYP4F30PQ9H0H9 118 aa7.29□□□□□ -1.24
NEDD1-210ENST00000557400 SPCS1Q9Y6A9 102 aa7.28□□□□□ -1.24
NEDD1-210ENST00000557400 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
NEDD1-210ENST00000557400 H0YAA0 97 aa7.23□□□□□ -1.25
NEDD1-210ENST00000557400 NDUFC1O43677 76 aa7.2□□□□□ -1.26
NEDD1-210ENST00000557400 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
NEDD1-210ENST00000557400 MT1XP80297 61 aa7.19□□□□□ -1.26
NEDD1-210ENST00000557400 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
NEDD1-210ENST00000557400 PRO0461Q9UI25 63 aa7.19□□□□□ -1.26
NEDD1-210ENST00000557400 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
NEDD1-210ENST00000557400 KRTAP8-1Q8IUC2 63 aa7.18□□□□□ -1.26
NEDD1-210ENST00000557400 A8MUN3 132 aa7.17□□□□□ -1.26
NEDD1-210ENST00000557400 K7EP34 96 aa7.15□□□□□ -1.26
NEDD1-210ENST00000557400 LCE1AQ5T7P2 110 aa7.15□□□□□ -1.26
NEDD1-210ENST00000557400 KRTAP2-2Q9BYT5 123 aa7.15□□□□□ -1.26
NEDD1-210ENST00000557400 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.26
NEDD1-210ENST00000557400 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
NEDD1-210ENST00000557400 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
NEDD1-210ENST00000557400 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
NEDD1-210ENST00000557400 ACYP1P07311 99 aa7.05□□□□□ -1.28
NEDD1-210ENST00000557400 SPRR2DP22532 72 aa7.05□□□□□ -1.28
NEDD1-210ENST00000557400 ATOX1O00244 68 aa7.02□□□□□ -1.29
NEDD1-210ENST00000557400 COL5A1-AS1Q5SY13 56 aa7.02□□□□□ -1.29
NEDD1-210ENST00000557400 H0Y9P7 68 aa7.01□□□□□ -1.29
NEDD1-210ENST00000557400 UQCRQO14949 82 aa7.01□□□□□ -1.29
NEDD1-210ENST00000557400 R4GN34 69 aa6.99□□□□□ -1.29
NEDD1-210ENST00000557400 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
NEDD1-210ENST00000557400 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
NEDD1-210ENST00000557400 F8W1H4 67 aa6.94□□□□□ -1.3
NEDD1-210ENST00000557400 P0C880 135 aa6.93□□□□□ -1.3
NEDD1-210ENST00000557400 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
NEDD1-210ENST00000557400 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
NEDD1-210ENST00000557400 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
NEDD1-210ENST00000557400 M0QZ58 72 aa6.92□□□□□ -1.3
NEDD1-210ENST00000557400 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
NEDD1-210ENST00000557400 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
NEDD1-210ENST00000557400 ATP5EP2Q5VTU8 51 aa6.89□□□□□ -1.31
NEDD1-210ENST00000557400 KRTAP4-12Q9BQ66 201 aa6.87□□□□□ -1.31
NEDD1-210ENST00000557400 LINC00208Q96KT6 92 aa6.86□□□□□ -1.31
NEDD1-210ENST00000557400 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
NEDD1-210ENST00000557400 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
NEDD1-210ENST00000557400 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
NEDD1-210ENST00000557400 FAM240AA0A1B0GVK7 77 aa6.79□□□□□ -1.32
NEDD1-210ENST00000557400 MP68P56378 58 aa6.77□□□□□ -1.33
NEDD1-210ENST00000557400 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
NEDD1-210ENST00000557400 OCR1Q9BZK8 76 aa6.72□□□□□ -1.33
NEDD1-210ENST00000557400 DMAC1Q96GE9 116 aa6.71□□□□□ -1.34
NEDD1-210ENST00000557400 KRTAP9-9Q9BYP9 154 aa6.7□□□□□ -1.34
NEDD1-210ENST00000557400 KRTAP9-4Q9BYQ2 154 aa6.7□□□□□ -1.34
NEDD1-210ENST00000557400 GPR98Q8WXG9 6306 aa6.7□□□□□ -1.34
NEDD1-210ENST00000557400 LINC00643Q86TS7 51 aa6.66□□□□□ -1.34
NEDD1-210ENST00000557400 MT-ATP8P03928 68 aa6.63□□□□□ -1.35
NEDD1-210ENST00000557400 H3BPC8 53 aa6.62□□□□□ -1.35
NEDD1-210ENST00000557400 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
NEDD1-210ENST00000557400 TRAV7A0A075B6U4 112 aa6.55□□□□□ -1.36
NEDD1-210ENST00000557400 PCP4L1A6NKN8 68 aa6.53□□□□□ -1.36
NEDD1-210ENST00000557400 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
NEDD1-210ENST00000557400 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
NEDD1-210ENST00000557400 SPTSSBQ8NFR3 76 aa6.48□□□□□ -1.37
NEDD1-210ENST00000557400 ACYP2P14621 99 aa6.47□□□□□ -1.37
NEDD1-210ENST00000557400 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
NEDD1-210ENST00000557400 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
NEDD1-210ENST00000557400 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
NEDD1-210ENST00000557400 MT1EP04732 61 aa6.4□□□□□ -1.38
NEDD1-210ENST00000557400 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
NEDD1-210ENST00000557400 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
NEDD1-210ENST00000557400 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
NEDD1-210ENST00000557400 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
NEDD1-210ENST00000557400 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
NEDD1-210ENST00000557400 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
NEDD1-210ENST00000557400 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
NEDD1-210ENST00000557400 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
NEDD1-210ENST00000557400 J3QR89 54 aa6.22□□□□□ -1.41
NEDD1-210ENST00000557400 MT1GP13640 62 aa6.22□□□□□ -1.41
NEDD1-210ENST00000557400 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
NEDD1-210ENST00000557400 MT4P47944 62 aa6.19□□□□□ -1.42
NEDD1-210ENST00000557400 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
NEDD1-210ENST00000557400 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
NEDD1-210ENST00000557400 A0A0D9SG42 100 aa6.17□□□□□ -1.42
NEDD1-210ENST00000557400 SMIM20Q8N5G0 67 aa6.17□□□□□ -1.42
NEDD1-210ENST00000557400 A0A1B0GV90 55 aa6.14□□□□□ -1.43
NEDD1-210ENST00000557400 AHNAK2Q8IVF2 5795 aa6.12□□□□□ -1.43
NEDD1-210ENST00000557400 MT1MQ8N339 61 aa6.11□□□□□ -1.43
NEDD1-210ENST00000557400 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
NEDD1-210ENST00000557400 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
NEDD1-210ENST00000557400 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
NEDD1-210ENST00000557400 MT1LQ93083 61 aa6.05□□□□□ -1.44
NEDD1-210ENST00000557400 KRTAP5-10Q6L8G5 202 aa6.04□□□□□ -1.44
NEDD1-210ENST00000557400 KRTAP5-4Q6L8H1 288 aa6.03□□□□□ -1.44
NEDD1-210ENST00000557400 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
NEDD1-210ENST00000557400 SPATA8Q6RVD6 105 aa5.99□□□□□ -1.45
NEDD1-210ENST00000557400 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
NEDD1-210ENST00000557400 SEC61GP60059 68 aa5.98□□□□□ -1.45
NEDD1-210ENST00000557400 SERP1Q9Y6X1 66 aa5.98□□□□□ -1.45
NEDD1-210ENST00000557400 KRTAP4-3Q9BYR4 195 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms