RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 H0YAA0 97 aa11.77□□□□□ -0.52
RCCD1-208ENST00000557266 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
RCCD1-208ENST00000557266 RPL37P61927 97 aaKnown RBP11.75□□□□□ -0.53
RCCD1-208ENST00000557266 ADM2Q7Z4H4 148 aa11.75□□□□□ -0.53
RCCD1-208ENST00000557266 PRAC1Q96KF2 57 aa11.74□□□□□ -0.53
RCCD1-208ENST00000557266 KRTAP4-5Q9BYR2 181 aa11.74□□□□□ -0.53
RCCD1-208ENST00000557266 DMBT1Q9UGM3 2413 aaPredicted RBP11.73□□□□□ -0.53
RCCD1-208ENST00000557266 A0A1B0GU33 70 aa11.72□□□□□ -0.53
RCCD1-208ENST00000557266 XP32Q5T750 250 aa11.72□□□□□ -0.53
RCCD1-208ENST00000557266 H1FX-AS1Q4G0G2 97 aa11.69□□□□□ -0.54
RCCD1-208ENST00000557266 MT1HL1P0DM35 61 aa11.68□□□□□ -0.54
RCCD1-208ENST00000557266 HERC2O95714 4834 aa11.63□□□□□ -0.55
RCCD1-208ENST00000557266 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
RCCD1-208ENST00000557266 ABCA13Q86UQ4 5058 aa11.55□□□□□ -0.56
RCCD1-208ENST00000557266 KRTAP10-6P60371 365 aaPredicted RBP11.45□□□□□ -0.58
RCCD1-208ENST00000557266 S4R3F8 94 aa11.45□□□□□ -0.58
RCCD1-208ENST00000557266 CSAG1Q6PB30 78 aa11.41□□□□□ -0.58
RCCD1-208ENST00000557266 KRTAP3-2Q9BYR7 98 aa11.39□□□□□ -0.59
RCCD1-208ENST00000557266 LPAP08519 4548 aa11.37□□□□□ -0.59
RCCD1-208ENST00000557266 J3QL48 77 aa11.34□□□□□ -0.59
RCCD1-208ENST00000557266 KRTAP13-4Q3LI77 160 aa11.32□□□□□ -0.6
RCCD1-208ENST00000557266 LRP2P98164 4655 aa11.32□□□□□ -0.6
RCCD1-208ENST00000557266 TPRXLQ17RH7 258 aa11.32□□□□□ -0.6
RCCD1-208ENST00000557266 LINC01554Q52M75 96 aa11.29□□□□□ -0.6
RCCD1-208ENST00000557266 K7ERS5 55 aa11.27□□□□□ -0.61
RCCD1-208ENST00000557266 P0C880 135 aa11.24□□□□□ -0.61
RCCD1-208ENST00000557266 PCLOQ9Y6V0 5065 aa11.22□□□□□ -0.61
RCCD1-208ENST00000557266 A0A0D9SG42 100 aa11.18□□□□□ -0.62
RCCD1-208ENST00000557266 KRTAP25-1Q3LHN0 102 aa11.13□□□□□ -0.63
RCCD1-208ENST00000557266 ROMO1P60602 79 aa11.03□□□□□ -0.64
RCCD1-208ENST00000557266 CRIPTQ9P021 101 aa10.99□□□□□ -0.65
RCCD1-208ENST00000557266 HERC1Q15751 4861 aa10.95□□□□□ -0.66
RCCD1-208ENST00000557266 KRTAP12-2P59991 146 aa10.93□□□□□ -0.66
RCCD1-208ENST00000557266 MUC17Q685J3 4493 aa10.87□□□□□ -0.67
RCCD1-208ENST00000557266 KRTAP12-1P59990 96 aa10.86□□□□□ -0.67
RCCD1-208ENST00000557266 SEC61BP60468 96 aaKnown RBP10.86□□□□□ -0.67
RCCD1-208ENST00000557266 M0QZ58 72 aa10.85□□□□□ -0.67
RCCD1-208ENST00000557266 SPINT4Q6UDR6 99 aa10.79□□□□□ -0.68
RCCD1-208ENST00000557266 HMCN2Q8NDA2 5059 aa10.79□□□□□ -0.68
RCCD1-208ENST00000557266 KRTAP4-1Q9BYQ7 146 aa10.79□□□□□ -0.68
RCCD1-208ENST00000557266 C10orf95Q9H7T3 257 aa10.66□□□□□ -0.7
RCCD1-208ENST00000557266 KRTAP19-2Q3LHN2 52 aa10.61□□□□□ -0.71
RCCD1-208ENST00000557266 R4GN34 69 aa10.61□□□□□ -0.71
RCCD1-208ENST00000557266 LORP23490 312 aaPredicted RBP10.55□□□□□ -0.72
RCCD1-208ENST00000557266 MUC2Q02817 5179 aa10.45□□□□□ -0.74
RCCD1-208ENST00000557266 FLGP20930 4061 aaPredicted RBP10.37□□□□□ -0.75
RCCD1-208ENST00000557266 UBR4Q5T4S7 5183 aa10.31□□□□□ -0.76
RCCD1-208ENST00000557266 RNF213Q63HN8 5207 aa10.19□□□□□ -0.78
RCCD1-208ENST00000557266 KRTAP15-1Q3LI76 137 aa10.13□□□□□ -0.79
RCCD1-208ENST00000557266 H3BS24 57 aa10.07□□□□□ -0.8
RCCD1-208ENST00000557266 CAMK2N1Q7Z7J9 78 aa10.04□□□□□ -0.8
RCCD1-208ENST00000557266 LCE2CQ5TA81 110 aa10.03□□□□□ -0.8
RCCD1-208ENST00000557266 FAT4Q6V0I7 4981 aa9.97□□□□□ -0.81
RCCD1-208ENST00000557266 MT1HP80294 61 aa9.83□□□□□ -0.84
RCCD1-208ENST00000557266 PP632Q6XCG6 107 aa9.81□□□□□ -0.84
RCCD1-208ENST00000557266 NDUFAF8A1L188 74 aa9.79□□□□□ -0.84
RCCD1-208ENST00000557266 PLAC4Q8WY50 150 aa9.74□□□□□ -0.85
RCCD1-208ENST00000557266 SPRR2GQ9BYE4 73 aa9.73□□□□□ -0.85
RCCD1-208ENST00000557266 M0R2T5 61 aa9.72□□□□□ -0.85
RCCD1-208ENST00000557266 KRTAP19-1Q8IUB9 90 aa9.7□□□□□ -0.86
RCCD1-208ENST00000557266 TNP1P09430 55 aa9.67□□□□□ -0.86
RCCD1-208ENST00000557266 MT2AP02795 61 aa9.55□□□□□ -0.88
RCCD1-208ENST00000557266 MT1FP04733 61 aa9.55□□□□□ -0.88
RCCD1-208ENST00000557266 KRTAP23-1A1A580 65 aa9.53□□□□□ -0.88
RCCD1-208ENST00000557266 KRTAP9-8Q9BYQ0 159 aa9.49□□□□□ -0.89
RCCD1-208ENST00000557266 KRTAP10-10P60014 251 aa9.49□□□□□ -0.89
RCCD1-208ENST00000557266 LCE2AQ5TA79 106 aaPredicted RBP9.49□□□□□ -0.89
RCCD1-208ENST00000557266 KRTAP19-8Q3LI54 63 aa9.32□□□□□ -0.92
RCCD1-208ENST00000557266 MT1BP07438 61 aa9.21□□□□□ -0.94
RCCD1-208ENST00000557266 LUZP6Q538Z0 58 aa9.21□□□□□ -0.94
RCCD1-208ENST00000557266 LCE3AQ5TA76 89 aa9.2□□□□□ -0.94
RCCD1-208ENST00000557266 SPRR5A0A1B0GTR4 108 aa9.15□□□□□ -0.94
RCCD1-208ENST00000557266 KRTAP10-5P60370 271 aa9.13□□□□□ -0.95
RCCD1-208ENST00000557266 MT1XP80297 61 aa9.12□□□□□ -0.95
RCCD1-208ENST00000557266 KRTAP9-3Q9BYQ3 159 aa9.12□□□□□ -0.95
RCCD1-208ENST00000557266 KRTAP8-1Q8IUC2 63 aa8.98□□□□□ -0.97
RCCD1-208ENST00000557266 KRTAP10-12P60413 245 aa8.89□□□□□ -0.99
RCCD1-208ENST00000557266 LCE2BO14633 110 aa8.87□□□□□ -0.99
RCCD1-208ENST00000557266 KRTAP10-7P60409 375 aaPredicted RBP8.85□□□□□ -0.99
RCCD1-208ENST00000557266 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
RCCD1-208ENST00000557266 PRO2289Q9P1D8 64 aa8.75□□□□□ -1.01
RCCD1-208ENST00000557266 USH2AO75445 5202 aa8.65□□□□□ -1.02
RCCD1-208ENST00000557266 A0A0A0MQY5 61 aa8.63□□□□□ -1.03
RCCD1-208ENST00000557266 LCE2DQ5TA82 110 aaPredicted RBP8.6□□□□□ -1.03
RCCD1-208ENST00000557266 KRTAP19-5Q3LI72 72 aa8.45□□□□□ -1.06
RCCD1-208ENST00000557266 KMT2DO14686 5537 aa8.42□□□□□ -1.06
RCCD1-208ENST00000557266 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
RCCD1-208ENST00000557266 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
RCCD1-208ENST00000557266 KRTAP19-6Q3LI70 58 aa8.35□□□□□ -1.07
RCCD1-208ENST00000557266 KRTAP4-8A0A0G2JLE6 195 aa8.31□□□□□ -1.08
RCCD1-208ENST00000557266 KRTAP4-8Q9BYQ9 185 aa8.31□□□□□ -1.08
RCCD1-208ENST00000557266 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
RCCD1-208ENST00000557266 LCE3CQ5T5A8 94 aa8.25□□□□□ -1.09
RCCD1-208ENST00000557266 KRTAP19-7Q3SYF9 63 aa8.13□□□□□ -1.11
RCCD1-208ENST00000557266 FCGBPQ9Y6R7 5405 aaPredicted RBP8.04□□□□□ -1.12
RCCD1-208ENST00000557266 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
RCCD1-208ENST00000557266 KRTAP9-6A8MVA2 160 aa7.97□□□□□ -1.13
RCCD1-208ENST00000557266 KRTAP4-7Q9BYR0 210 aa7.91□□□□□ -1.14
RCCD1-208ENST00000557266 MT1EP04732 61 aa7.9□□□□□ -1.14
RCCD1-208ENST00000557266 INE1O15225 51 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms