RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 J3QL48 77 aa8.04□□□□□ -1.12
TMEM55B-207ENST00000557041 XP32Q5T750 250 aa8.04□□□□□ -1.12
TMEM55B-207ENST00000557041 KRTAP10-8P60410 259 aa8.03□□□□□ -1.12
TMEM55B-207ENST00000557041 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
TMEM55B-207ENST00000557041 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
TMEM55B-207ENST00000557041 S4R3F8 94 aa8□□□□□ -1.13
TMEM55B-207ENST00000557041 RYR1P21817 5038 aa8□□□□□ -1.13
TMEM55B-207ENST00000557041 CSAG1Q6PB30 78 aa7.98□□□□□ -1.13
TMEM55B-207ENST00000557041 H0YAA0 97 aa7.96□□□□□ -1.13
TMEM55B-207ENST00000557041 LINC01554Q52M75 96 aa7.95□□□□□ -1.14
TMEM55B-207ENST00000557041 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
TMEM55B-207ENST00000557041 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
TMEM55B-207ENST00000557041 HSPG2P98160 4391 aa7.84□□□□□ -1.15
TMEM55B-207ENST00000557041 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
TMEM55B-207ENST00000557041 MT1HL1P0DM35 61 aa7.82□□□□□ -1.16
TMEM55B-207ENST00000557041 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
TMEM55B-207ENST00000557041 P0C880 135 aa7.8□□□□□ -1.16
TMEM55B-207ENST00000557041 LRP2P98164 4655 aa7.8□□□□□ -1.16
TMEM55B-207ENST00000557041 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
TMEM55B-207ENST00000557041 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
TMEM55B-207ENST00000557041 LPAP08519 4548 aa7.67□□□□□ -1.18
TMEM55B-207ENST00000557041 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
TMEM55B-207ENST00000557041 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
TMEM55B-207ENST00000557041 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
TMEM55B-207ENST00000557041 M0QZ58 72 aa7.64□□□□□ -1.19
TMEM55B-207ENST00000557041 R4GN34 69 aa7.64□□□□□ -1.19
TMEM55B-207ENST00000557041 TNXBP22105 4242 aa7.63□□□□□ -1.19
TMEM55B-207ENST00000557041 KRTAP10-6P60371 365 aaPredicted RBP7.63□□□□□ -1.19
TMEM55B-207ENST00000557041 ROMO1P60602 79 aa7.61□□□□□ -1.19
TMEM55B-207ENST00000557041 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
TMEM55B-207ENST00000557041 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
TMEM55B-207ENST00000557041 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
TMEM55B-207ENST00000557041 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
TMEM55B-207ENST00000557041 HERC2O95714 4834 aa7.5□□□□□ -1.21
TMEM55B-207ENST00000557041 KRTAP12-2P59991 146 aa7.48□□□□□ -1.21
TMEM55B-207ENST00000557041 MUC2Q02817 5179 aa7.41□□□□□ -1.22
TMEM55B-207ENST00000557041 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
TMEM55B-207ENST00000557041 M0R2T5 61 aa7.38□□□□□ -1.23
TMEM55B-207ENST00000557041 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
TMEM55B-207ENST00000557041 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
TMEM55B-207ENST00000557041 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
TMEM55B-207ENST00000557041 HERC1Q15751 4861 aa7.24□□□□□ -1.25
TMEM55B-207ENST00000557041 H3BS24 57 aa7.13□□□□□ -1.27
TMEM55B-207ENST00000557041 RNF213Q63HN8 5207 aa7.09□□□□□ -1.28
TMEM55B-207ENST00000557041 FAT4Q6V0I7 4981 aa7.07□□□□□ -1.28
TMEM55B-207ENST00000557041 BIRC6Q9NR09 4857 aa7.02□□□□□ -1.29
TMEM55B-207ENST00000557041 NDUFAF8A1L188 74 aa6.99□□□□□ -1.29
TMEM55B-207ENST00000557041 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
TMEM55B-207ENST00000557041 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
TMEM55B-207ENST00000557041 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
TMEM55B-207ENST00000557041 MUC17Q685J3 4493 aa6.9□□□□□ -1.3
TMEM55B-207ENST00000557041 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
TMEM55B-207ENST00000557041 TNP1P09430 55 aa6.82□□□□□ -1.32
TMEM55B-207ENST00000557041 HMCN2Q8NDA2 5059 aa6.76□□□□□ -1.33
TMEM55B-207ENST00000557041 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
TMEM55B-207ENST00000557041 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
TMEM55B-207ENST00000557041 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
TMEM55B-207ENST00000557041 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
TMEM55B-207ENST00000557041 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
TMEM55B-207ENST00000557041 MT1HP80294 61 aa6.59□□□□□ -1.35
TMEM55B-207ENST00000557041 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
TMEM55B-207ENST00000557041 MT1FP04733 61 aa6.5□□□□□ -1.37
TMEM55B-207ENST00000557041 MT2AP02795 61 aa6.48□□□□□ -1.37
TMEM55B-207ENST00000557041 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
TMEM55B-207ENST00000557041 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
TMEM55B-207ENST00000557041 LCE3AQ5TA76 89 aa6.36□□□□□ -1.39
TMEM55B-207ENST00000557041 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
TMEM55B-207ENST00000557041 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
TMEM55B-207ENST00000557041 USH2AO75445 5202 aa6.29□□□□□ -1.4
TMEM55B-207ENST00000557041 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
TMEM55B-207ENST00000557041 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
TMEM55B-207ENST00000557041 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
TMEM55B-207ENST00000557041 MT1BP07438 61 aa6.13□□□□□ -1.43
TMEM55B-207ENST00000557041 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
TMEM55B-207ENST00000557041 KMT2DO14686 5537 aa6.08□□□□□ -1.44
TMEM55B-207ENST00000557041 MT1XP80297 61 aa6.08□□□□□ -1.44
TMEM55B-207ENST00000557041 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
TMEM55B-207ENST00000557041 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
TMEM55B-207ENST00000557041 KRTAP19-8Q3LI54 63 aa6.05□□□□□ -1.44
TMEM55B-207ENST00000557041 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
TMEM55B-207ENST00000557041 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
TMEM55B-207ENST00000557041 LCE2BO14633 110 aa5.93□□□□□ -1.46
TMEM55B-207ENST00000557041 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
TMEM55B-207ENST00000557041 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
TMEM55B-207ENST00000557041 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
TMEM55B-207ENST00000557041 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
TMEM55B-207ENST00000557041 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
TMEM55B-207ENST00000557041 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
TMEM55B-207ENST00000557041 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
TMEM55B-207ENST00000557041 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
TMEM55B-207ENST00000557041 CRCT1Q9UGL9 99 aa5.59□□□□□ -1.51
TMEM55B-207ENST00000557041 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
TMEM55B-207ENST00000557041 SSPOA2VEC9 5147 aa5.53□□□□□ -1.52
TMEM55B-207ENST00000557041 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
TMEM55B-207ENST00000557041 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.54
TMEM55B-207ENST00000557041 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
TMEM55B-207ENST00000557041 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
TMEM55B-207ENST00000557041 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
TMEM55B-207ENST00000557041 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
TMEM55B-207ENST00000557041 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms