RNA–Protein interactions for RNA: ENST00000556782.5

PRPF39-211, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-211ENST00000556782 TMEM254Q8TBM7 123 aa2.61□□□□□ -1.99
PRPF39-211ENST00000556782 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
PRPF39-211ENST00000556782 K7EQZ3 153 aa2.6□□□□□ -1.99
PRPF39-211ENST00000556782 MRPL34Q9BQ48 92 aaKnown RBP2.6□□□□□ -1.99
PRPF39-211ENST00000556782 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
PRPF39-211ENST00000556782 A0A1W2PPM0 123 aa2.59□□□□□ -1.99
PRPF39-211ENST00000556782 TAX1BP3O14907 124 aa2.59□□□□□ -1.99
PRPF39-211ENST00000556782 hDV103S1A0JD37 113 aa2.58□□□□□ -2
PRPF39-211ENST00000556782 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
PRPF39-211ENST00000556782 BPY2O14599 106 aa2.57□□□□□ -2
PRPF39-211ENST00000556782 NDUFS5O43920 106 aa2.57□□□□□ -2
PRPF39-211ENST00000556782 H1FX-AS1Q4G0G2 97 aa2.55□□□□□ -2
PRPF39-211ENST00000556782 Q5W150 140 aa2.55□□□□□ -2
PRPF39-211ENST00000556782 C7orf65Q6ZTY9 151 aa2.55□□□□□ -2
PRPF39-211ENST00000556782 Q8N9L7 120 aa2.55□□□□□ -2
PRPF39-211ENST00000556782 SPCS1Q9Y6A9 102 aa2.55□□□□□ -2
PRPF39-211ENST00000556782 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
PRPF39-211ENST00000556782 CASC2Q6XLA1 102 aa2.54□□□□□ -2
PRPF39-211ENST00000556782 HCG22E2RYF7 251 aa2.53□□□□□ -2
PRPF39-211ENST00000556782 CXCL6P80162 114 aa2.52□□□□□ -2.01
PRPF39-211ENST00000556782 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
PRPF39-211ENST00000556782 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
PRPF39-211ENST00000556782 PRO0461Q9UI25 63 aa2.52□□□□□ -2.01
PRPF39-211ENST00000556782 C4orf26Q17RF5 130 aa2.51□□□□□ -2.01
PRPF39-211ENST00000556782 COL5A1-AS1Q5SY13 56 aa2.51□□□□□ -2.01
PRPF39-211ENST00000556782 UBL5Q9BZL1 73 aa2.51□□□□□ -2.01
PRPF39-211ENST00000556782 K7EP34 96 aa2.5□□□□□ -2.01
PRPF39-211ENST00000556782 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
PRPF39-211ENST00000556782 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
PRPF39-211ENST00000556782 GTF2H5Q6ZYL4 71 aa2.46□□□□□ -2.02
PRPF39-211ENST00000556782 TP53AIP1Q9HCN2 124 aa2.46□□□□□ -2.02
PRPF39-211ENST00000556782 S4R3F8 94 aa2.46□□□□□ -2.02
PRPF39-211ENST00000556782 F8W1H4 67 aa2.45□□□□□ -2.02
PRPF39-211ENST00000556782 ETDBQ3ZM63 59 aa2.45□□□□□ -2.02
PRPF39-211ENST00000556782 LCA10Q71F78 164 aa2.45□□□□□ -2.02
PRPF39-211ENST00000556782 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
PRPF39-211ENST00000556782 FAM236AA0A1B0GUQ0 79 aa2.44□□□□□ -2.02
PRPF39-211ENST00000556782 FAM236BA0A1B0GV22 79 aa2.44□□□□□ -2.02
PRPF39-211ENST00000556782 CSAG1Q6PB30 78 aa2.43□□□□□ -2.02
PRPF39-211ENST00000556782 PCP4L1A6NKN8 68 aa2.42□□□□□ -2.02
PRPF39-211ENST00000556782 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
PRPF39-211ENST00000556782 CYP4F30PQ9H0H9 118 aa2.42□□□□□ -2.02
PRPF39-211ENST00000556782 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
PRPF39-211ENST00000556782 TRAV22A0A0B4J277 110 aa2.41□□□□□ -2.02
PRPF39-211ENST00000556782 MT1BP07438 61 aa2.41□□□□□ -2.02
PRPF39-211ENST00000556782 KRTAP19-8Q3LI54 63 aa2.41□□□□□ -2.02
PRPF39-211ENST00000556782 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
PRPF39-211ENST00000556782 LOC101927531A0A1B0GV80 90 aa2.4□□□□□ -2.03
PRPF39-211ENST00000556782 ACYP1P07311 99 aa2.4□□□□□ -2.03
PRPF39-211ENST00000556782 KLKP1Q107X0 134 aa2.4□□□□□ -2.03
PRPF39-211ENST00000556782 Q5VV11 94 aa2.4□□□□□ -2.03
PRPF39-211ENST00000556782 A0A087WVE0 104 aa2.39□□□□□ -2.03
PRPF39-211ENST00000556782 FAM240AA0A1B0GVK7 77 aa2.39□□□□□ -2.03
PRPF39-211ENST00000556782 A6NN06 94 aa2.39□□□□□ -2.03
PRPF39-211ENST00000556782 ATP5EP2Q5VTU8 51 aa2.39□□□□□ -2.03
PRPF39-211ENST00000556782 H0Y9P7 68 aa2.37□□□□□ -2.03
PRPF39-211ENST00000556782 UQCRQO14949 82 aa2.37□□□□□ -2.03
PRPF39-211ENST00000556782 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
PRPF39-211ENST00000556782 ATOX1O00244 68 aa2.36□□□□□ -2.03
PRPF39-211ENST00000556782 CRIPTQ9P021 101 aa2.36□□□□□ -2.03
PRPF39-211ENST00000556782 IMUPQ9GZP8 106 aa2.35□□□□□ -2.03
PRPF39-211ENST00000556782 H0YAA0 97 aa2.34□□□□□ -2.03
PRPF39-211ENST00000556782 NDUFC1O43677 76 aa2.34□□□□□ -2.03
PRPF39-211ENST00000556782 LINC00643Q86TS7 51 aa2.34□□□□□ -2.03
PRPF39-211ENST00000556782 A8MUN3 132 aa2.33□□□□□ -2.04
PRPF39-211ENST00000556782 LINC00208Q96KT6 92 aa2.32□□□□□ -2.04
PRPF39-211ENST00000556782 MP68P56378 58 aa2.3□□□□□ -2.04
PRPF39-211ENST00000556782 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
PRPF39-211ENST00000556782 A0A1B0GV90 55 aa2.29□□□□□ -2.04
PRPF39-211ENST00000556782 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
PRPF39-211ENST00000556782 NEBP20929 6669 aa2.28□□□□□ -2.04
PRPF39-211ENST00000556782 H3BPC8 53 aa2.27□□□□□ -2.05
PRPF39-211ENST00000556782 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
PRPF39-211ENST00000556782 MT1XP80297 61 aa2.26□□□□□ -2.05
PRPF39-211ENST00000556782 DMAC1Q96GE9 116 aa2.26□□□□□ -2.05
PRPF39-211ENST00000556782 J3QR89 54 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 P0C880 135 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 C20orf197Q8N268 126 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 R4GN34 69 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 KMT2DO14686 5537 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
PRPF39-211ENST00000556782 KRTAP20-1Q3LI63 56 aa2.24□□□□□ -2.05
PRPF39-211ENST00000556782 PLAC4Q8WY50 150 aa2.24□□□□□ -2.05
PRPF39-211ENST00000556782 M0QZ58 72 aa2.23□□□□□ -2.05
PRPF39-211ENST00000556782 SCGB1A1P11684 91 aa2.23□□□□□ -2.05
PRPF39-211ENST00000556782 TRAV7A0A075B6U4 112 aa2.21□□□□□ -2.06
PRPF39-211ENST00000556782 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
PRPF39-211ENST00000556782 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
PRPF39-211ENST00000556782 ACYP2P14621 99 aa2.19□□□□□ -2.06
PRPF39-211ENST00000556782 SPRR2EP22531 72 aa2.19□□□□□ -2.06
PRPF39-211ENST00000556782 SPRR2BP35325 72 aa2.19□□□□□ -2.06
PRPF39-211ENST00000556782 SPRR2AP35326 72 aa2.19□□□□□ -2.06
PRPF39-211ENST00000556782 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
PRPF39-211ENST00000556782 MT-ATP8P03928 68 aa2.18□□□□□ -2.06
PRPF39-211ENST00000556782 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
PRPF39-211ENST00000556782 SMIM20Q8N5G0 67 aa2.18□□□□□ -2.06
PRPF39-211ENST00000556782 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
PRPF39-211ENST00000556782 SPTSSBQ8NFR3 76 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms