RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MT2AP02795 61 aa4.68□□□□□ -1.66
SRP54-210ENST00000556380 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
SRP54-210ENST00000556380 IMUPQ9GZP8 106 aa4.67□□□□□ -1.66
SRP54-210ENST00000556380 A0A087WVE0 104 aa4.66□□□□□ -1.66
SRP54-210ENST00000556380 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
SRP54-210ENST00000556380 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
SRP54-210ENST00000556380 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.66
SRP54-210ENST00000556380 MT1FP04733 61 aa4.64□□□□□ -1.67
SRP54-210ENST00000556380 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
SRP54-210ENST00000556380 USH2AO75445 5202 aa4.64□□□□□ -1.67
SRP54-210ENST00000556380 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
SRP54-210ENST00000556380 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
SRP54-210ENST00000556380 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
SRP54-210ENST00000556380 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
SRP54-210ENST00000556380 H0Y9P7 68 aa4.61□□□□□ -1.67
SRP54-210ENST00000556380 C5orf47Q569G3 176 aa4.61□□□□□ -1.67
SRP54-210ENST00000556380 MP68P56378 58 aa4.6□□□□□ -1.67
SRP54-210ENST00000556380 H3BPC8 53 aa4.59□□□□□ -1.67
SRP54-210ENST00000556380 SCGB1A1P11684 91 aa4.59□□□□□ -1.67
SRP54-210ENST00000556380 C1orf64Q8NEQ6 169 aa4.59□□□□□ -1.67
SRP54-210ENST00000556380 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
SRP54-210ENST00000556380 SMIM20Q8N5G0 67 aa4.58□□□□□ -1.68
SRP54-210ENST00000556380 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
SRP54-210ENST00000556380 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
SRP54-210ENST00000556380 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
SRP54-210ENST00000556380 LINC00208Q96KT6 92 aa4.55□□□□□ -1.68
SRP54-210ENST00000556380 A8MUN3 132 aa4.54□□□□□ -1.68
SRP54-210ENST00000556380 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
SRP54-210ENST00000556380 S4R3F8 94 aa4.52□□□□□ -1.69
SRP54-210ENST00000556380 FAM236AA0A1B0GUQ0 79 aa4.51□□□□□ -1.69
SRP54-210ENST00000556380 FAM236BA0A1B0GV22 79 aa4.51□□□□□ -1.69
SRP54-210ENST00000556380 LCA10Q71F78 164 aa4.51□□□□□ -1.69
SRP54-210ENST00000556380 TRAV7A0A075B6U4 112 aa4.5□□□□□ -1.69
SRP54-210ENST00000556380 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
SRP54-210ENST00000556380 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
SRP54-210ENST00000556380 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
SRP54-210ENST00000556380 NDUFC1O43677 76 aa4.42□□□□□ -1.7
SRP54-210ENST00000556380 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
SRP54-210ENST00000556380 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
SRP54-210ENST00000556380 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
SRP54-210ENST00000556380 H0YAA0 97 aa4.38□□□□□ -1.71
SRP54-210ENST00000556380 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
SRP54-210ENST00000556380 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
SRP54-210ENST00000556380 ACYP2P14621 99 aa4.35□□□□□ -1.71
SRP54-210ENST00000556380 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
SRP54-210ENST00000556380 SPANXA2-OT1Q8N9U9 137 aa4.35□□□□□ -1.71
SRP54-210ENST00000556380 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
SRP54-210ENST00000556380 C20orf197Q8N268 126 aa4.34□□□□□ -1.71
SRP54-210ENST00000556380 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
SRP54-210ENST00000556380 COX7CP15954 63 aa4.32□□□□□ -1.72
SRP54-210ENST00000556380 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
SRP54-210ENST00000556380 MT1BP07438 61 aa4.3□□□□□ -1.72
SRP54-210ENST00000556380 SPTSSBQ8NFR3 76 aa4.3□□□□□ -1.72
SRP54-210ENST00000556380 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
SRP54-210ENST00000556380 CHKB-CPT1BH3BT56 60 aa4.25□□□□□ -1.73
SRP54-210ENST00000556380 MT3P25713 68 aa4.25□□□□□ -1.73
SRP54-210ENST00000556380 Q5VV11 94 aa4.25□□□□□ -1.73
SRP54-210ENST00000556380 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
SRP54-210ENST00000556380 P0C880 135 aa4.22□□□□□ -1.73
SRP54-210ENST00000556380 H7BZZ5 65 aa4.2□□□□□ -1.74
SRP54-210ENST00000556380 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
SRP54-210ENST00000556380 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
SRP54-210ENST00000556380 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
SRP54-210ENST00000556380 R4GN34 69 aa4.16□□□□□ -1.74
SRP54-210ENST00000556380 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
SRP54-210ENST00000556380 COA5Q86WW8 74 aa4.15□□□□□ -1.75
SRP54-210ENST00000556380 A6NN06 94 aa4.14□□□□□ -1.75
SRP54-210ENST00000556380 ATP5EP56381 51 aaPredicted RBP4.13□□□□□ -1.75
SRP54-210ENST00000556380 M0QZ58 72 aa4.12□□□□□ -1.75
SRP54-210ENST00000556380 CCDC179H3BU77 68 aa4.11□□□□□ -1.75
SRP54-210ENST00000556380 SEC61GP60059 68 aa4.08□□□□□ -1.76
SRP54-210ENST00000556380 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
SRP54-210ENST00000556380 MT1XP80297 61 aa4.06□□□□□ -1.76
SRP54-210ENST00000556380 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
SRP54-210ENST00000556380 TMEM258P61165 79 aa4.05□□□□□ -1.76
SRP54-210ENST00000556380 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
SRP54-210ENST00000556380 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
SRP54-210ENST00000556380 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
SRP54-210ENST00000556380 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
SRP54-210ENST00000556380 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
SRP54-210ENST00000556380 A0A1B0GU33 70 aa3.96□□□□□ -1.78
SRP54-210ENST00000556380 A0A1B0GU69 56 aa3.96□□□□□ -1.78
SRP54-210ENST00000556380 KMT2DO14686 5537 aa3.96□□□□□ -1.78
SRP54-210ENST00000556380 PCP4P48539 62 aa3.95□□□□□ -1.78
SRP54-210ENST00000556380 KRTAP12-2P59991 146 aa3.94□□□□□ -1.78
SRP54-210ENST00000556380 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
SRP54-210ENST00000556380 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
SRP54-210ENST00000556380 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
SRP54-210ENST00000556380 NEBP20929 6669 aa3.92□□□□□ -1.78
SRP54-210ENST00000556380 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
SRP54-210ENST00000556380 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
SRP54-210ENST00000556380 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
SRP54-210ENST00000556380 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
SRP54-210ENST00000556380 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
SRP54-210ENST00000556380 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
SRP54-210ENST00000556380 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
SRP54-210ENST00000556380 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
SRP54-210ENST00000556380 A0A0D9SG42 100 aa3.84□□□□□ -1.79
SRP54-210ENST00000556380 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
SRP54-210ENST00000556380 V9GYY9 64 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms