RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
PRKCH-221ENST00000556245 RYR1P21817 5038 aa6.02□□□□□ -1.45
PRKCH-221ENST00000556245 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
PRKCH-221ENST00000556245 PRAC1Q96KF2 57 aa6□□□□□ -1.45
PRKCH-221ENST00000556245 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
PRKCH-221ENST00000556245 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
PRKCH-221ENST00000556245 S4R3F8 94 aa5.96□□□□□ -1.46
PRKCH-221ENST00000556245 RYR3Q15413 4870 aa5.96□□□□□ -1.46
PRKCH-221ENST00000556245 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
PRKCH-221ENST00000556245 K7ERS5 55 aa5.91□□□□□ -1.46
PRKCH-221ENST00000556245 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
PRKCH-221ENST00000556245 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
PRKCH-221ENST00000556245 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-221ENST00000556245 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
PRKCH-221ENST00000556245 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
PRKCH-221ENST00000556245 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
PRKCH-221ENST00000556245 H3BS24 57 aa5.83□□□□□ -1.48
PRKCH-221ENST00000556245 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
PRKCH-221ENST00000556245 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
PRKCH-221ENST00000556245 P0C880 135 aa5.78□□□□□ -1.48
PRKCH-221ENST00000556245 A0A0D9SG42 100 aa5.76□□□□□ -1.49
PRKCH-221ENST00000556245 EPPK1P58107 5090 aaKnown RBP5.74□□□□□ -1.49
PRKCH-221ENST00000556245 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
PRKCH-221ENST00000556245 KRTAP4-5Q9BYR2 181 aa5.74□□□□□ -1.49
PRKCH-221ENST00000556245 ROMO1P60602 79 aa5.72□□□□□ -1.49
PRKCH-221ENST00000556245 LRP2P98164 4655 aa5.71□□□□□ -1.49
PRKCH-221ENST00000556245 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
PRKCH-221ENST00000556245 M0QZ58 72 aa5.67□□□□□ -1.5
PRKCH-221ENST00000556245 LPAP08519 4548 aa5.66□□□□□ -1.5
PRKCH-221ENST00000556245 J3QL48 77 aa5.66□□□□□ -1.5
PRKCH-221ENST00000556245 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
PRKCH-221ENST00000556245 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
PRKCH-221ENST00000556245 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
PRKCH-221ENST00000556245 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
PRKCH-221ENST00000556245 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
PRKCH-221ENST00000556245 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
PRKCH-221ENST00000556245 R4GN34 69 aa5.53□□□□□ -1.52
PRKCH-221ENST00000556245 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
PRKCH-221ENST00000556245 HERC2O95714 4834 aa5.47□□□□□ -1.53
PRKCH-221ENST00000556245 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
PRKCH-221ENST00000556245 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
PRKCH-221ENST00000556245 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.55
PRKCH-221ENST00000556245 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
PRKCH-221ENST00000556245 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
PRKCH-221ENST00000556245 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
PRKCH-221ENST00000556245 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
PRKCH-221ENST00000556245 MUC2Q02817 5179 aa5.18□□□□□ -1.58
PRKCH-221ENST00000556245 HERC1Q15751 4861 aa5.18□□□□□ -1.58
PRKCH-221ENST00000556245 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
PRKCH-221ENST00000556245 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.58
PRKCH-221ENST00000556245 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
PRKCH-221ENST00000556245 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
PRKCH-221ENST00000556245 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
PRKCH-221ENST00000556245 M0R2T5 61 aa5.07□□□□□ -1.6
PRKCH-221ENST00000556245 TNP1P09430 55 aa5.05□□□□□ -1.6
PRKCH-221ENST00000556245 SPRR2GQ9BYE4 73 aa5.05□□□□□ -1.6
PRKCH-221ENST00000556245 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
PRKCH-221ENST00000556245 MT1HP80294 61 aa5.03□□□□□ -1.6
PRKCH-221ENST00000556245 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
PRKCH-221ENST00000556245 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
PRKCH-221ENST00000556245 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
PRKCH-221ENST00000556245 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
PRKCH-221ENST00000556245 LCE2BO14633 110 aa4.95□□□□□ -1.62
PRKCH-221ENST00000556245 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
PRKCH-221ENST00000556245 RNF213Q63HN8 5207 aa4.93□□□□□ -1.62
PRKCH-221ENST00000556245 MT2AP02795 61 aa4.93□□□□□ -1.62
PRKCH-221ENST00000556245 MT1FP04733 61 aa4.92□□□□□ -1.62
PRKCH-221ENST00000556245 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
PRKCH-221ENST00000556245 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
PRKCH-221ENST00000556245 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.63
PRKCH-221ENST00000556245 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
PRKCH-221ENST00000556245 MT1BP07438 61 aa4.75□□□□□ -1.65
PRKCH-221ENST00000556245 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
PRKCH-221ENST00000556245 SPRR5A0A1B0GTR4 108 aa4.7□□□□□ -1.66
PRKCH-221ENST00000556245 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
PRKCH-221ENST00000556245 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
PRKCH-221ENST00000556245 MT1XP80297 61 aa4.69□□□□□ -1.66
PRKCH-221ENST00000556245 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
PRKCH-221ENST00000556245 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.66
PRKCH-221ENST00000556245 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
PRKCH-221ENST00000556245 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
PRKCH-221ENST00000556245 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
PRKCH-221ENST00000556245 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
PRKCH-221ENST00000556245 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
PRKCH-221ENST00000556245 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
PRKCH-221ENST00000556245 USH2AO75445 5202 aa4.26□□□□□ -1.73
PRKCH-221ENST00000556245 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
PRKCH-221ENST00000556245 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
PRKCH-221ENST00000556245 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
PRKCH-221ENST00000556245 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
PRKCH-221ENST00000556245 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
PRKCH-221ENST00000556245 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
PRKCH-221ENST00000556245 KMT2DO14686 5537 aa4.16□□□□□ -1.74
PRKCH-221ENST00000556245 INE1O15225 51 aa4.11□□□□□ -1.75
PRKCH-221ENST00000556245 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
PRKCH-221ENST00000556245 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
PRKCH-221ENST00000556245 MT1EP04732 61 aa4.08□□□□□ -1.76
PRKCH-221ENST00000556245 MT1LQ93083 61 aa4.07□□□□□ -1.76
PRKCH-221ENST00000556245 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
PRKCH-221ENST00000556245 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms