RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 COL5A1-AS1Q5SY13 56 aa8.17□□□□□ -1.1
CDKN3-209ENST00000556102 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
CDKN3-209ENST00000556102 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
CDKN3-209ENST00000556102 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
CDKN3-209ENST00000556102 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
CDKN3-209ENST00000556102 H0YAA0 97 aa8.06□□□□□ -1.12
CDKN3-209ENST00000556102 NDUFC1O43677 76 aa8.05□□□□□ -1.12
CDKN3-209ENST00000556102 ETDBQ3ZM63 59 aa8.04□□□□□ -1.12
CDKN3-209ENST00000556102 GTF2H5Q6ZYL4 71 aa8.04□□□□□ -1.12
CDKN3-209ENST00000556102 F8W1H4 67 aa8.03□□□□□ -1.12
CDKN3-209ENST00000556102 UQCRQO14949 82 aa7.97□□□□□ -1.13
CDKN3-209ENST00000556102 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
CDKN3-209ENST00000556102 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
CDKN3-209ENST00000556102 A8MUN3 132 aa7.96□□□□□ -1.14
CDKN3-209ENST00000556102 H0Y9P7 68 aa7.96□□□□□ -1.14
CDKN3-209ENST00000556102 ATOX1O00244 68 aa7.96□□□□□ -1.14
CDKN3-209ENST00000556102 ADM2Q7Z4H4 148 aa7.96□□□□□ -1.14
CDKN3-209ENST00000556102 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.14
CDKN3-209ENST00000556102 SPRR2FQ96RM1 72 aa7.95□□□□□ -1.14
CDKN3-209ENST00000556102 ACYP1P07311 99 aa7.94□□□□□ -1.14
CDKN3-209ENST00000556102 MT1XP80297 61 aa7.92□□□□□ -1.14
CDKN3-209ENST00000556102 SPRR2EP22531 72 aa7.9□□□□□ -1.14
CDKN3-209ENST00000556102 SPRR2BP35325 72 aa7.9□□□□□ -1.14
CDKN3-209ENST00000556102 SPRR2AP35326 72 aa7.9□□□□□ -1.14
CDKN3-209ENST00000556102 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.14
CDKN3-209ENST00000556102 HIST1H4AP62805 103 aaKnown RBP7.89□□□□□ -1.15
CDKN3-209ENST00000556102 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
CDKN3-209ENST00000556102 FAM240AA0A1B0GVK7 77 aa7.83□□□□□ -1.16
CDKN3-209ENST00000556102 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
CDKN3-209ENST00000556102 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
CDKN3-209ENST00000556102 LINC00208Q96KT6 92 aa7.8□□□□□ -1.16
CDKN3-209ENST00000556102 R4GN34 69 aa7.79□□□□□ -1.16
CDKN3-209ENST00000556102 LCE1AQ5T7P2 110 aa7.76□□□□□ -1.17
CDKN3-209ENST00000556102 P0C880 135 aa7.74□□□□□ -1.17
CDKN3-209ENST00000556102 C20orf197Q8N268 126 aa7.74□□□□□ -1.17
CDKN3-209ENST00000556102 MP68P56378 58 aa7.72□□□□□ -1.17
CDKN3-209ENST00000556102 M0QZ58 72 aa7.71□□□□□ -1.18
CDKN3-209ENST00000556102 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
CDKN3-209ENST00000556102 KRTAP2-2Q9BYT5 123 aa7.7□□□□□ -1.18
CDKN3-209ENST00000556102 KRTAP2-1Q9BYU5 128 aa7.7□□□□□ -1.18
CDKN3-209ENST00000556102 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
CDKN3-209ENST00000556102 OCR1Q9BZK8 76 aa7.68□□□□□ -1.18
CDKN3-209ENST00000556102 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
CDKN3-209ENST00000556102 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
CDKN3-209ENST00000556102 SPRR2DP22532 72 aa7.64□□□□□ -1.19
CDKN3-209ENST00000556102 LINC01554Q52M75 96 aa7.61□□□□□ -1.19
CDKN3-209ENST00000556102 DMAC1Q96GE9 116 aa7.6□□□□□ -1.19
CDKN3-209ENST00000556102 H3BPC8 53 aa7.58□□□□□ -1.2
CDKN3-209ENST00000556102 KRTAP10-7P60409 375 aaPredicted RBP7.54□□□□□ -1.2
CDKN3-209ENST00000556102 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
CDKN3-209ENST00000556102 LCE3BQ5TA77 95 aa7.45□□□□□ -1.22
CDKN3-209ENST00000556102 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
CDKN3-209ENST00000556102 MT-ATP8P03928 68 aa7.41□□□□□ -1.22
CDKN3-209ENST00000556102 SCGB1A1P11684 91 aa7.4□□□□□ -1.22
CDKN3-209ENST00000556102 ACYP2P14621 99 aa7.36□□□□□ -1.23
CDKN3-209ENST00000556102 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
CDKN3-209ENST00000556102 KRTAP4-12Q9BQ66 201 aa7.32□□□□□ -1.24
CDKN3-209ENST00000556102 J3QR89 54 aa7.28□□□□□ -1.24
CDKN3-209ENST00000556102 A0A1B0GV90 55 aa7.27□□□□□ -1.25
CDKN3-209ENST00000556102 CHKB-CPT1BH3BT56 60 aa7.22□□□□□ -1.25
CDKN3-209ENST00000556102 SMIM20Q8N5G0 67 aa7.14□□□□□ -1.27
CDKN3-209ENST00000556102 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
CDKN3-209ENST00000556102 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
CDKN3-209ENST00000556102 LCE5AQ5TCM9 118 aa7.09□□□□□ -1.27
CDKN3-209ENST00000556102 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
CDKN3-209ENST00000556102 DSTQ03001 7570 aaKnown RBP7.06□□□□□ -1.28
CDKN3-209ENST00000556102 MT1EP04732 61 aa7.04□□□□□ -1.28
CDKN3-209ENST00000556102 GPR98Q8WXG9 6306 aa7.04□□□□□ -1.28
CDKN3-209ENST00000556102 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
CDKN3-209ENST00000556102 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
CDKN3-209ENST00000556102 SPANXA2-OT1Q8N9U9 137 aa7□□□□□ -1.29
CDKN3-209ENST00000556102 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
CDKN3-209ENST00000556102 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
CDKN3-209ENST00000556102 KRTAP4-9Q9BYQ8 210 aa6.99□□□□□ -1.29
CDKN3-209ENST00000556102 H3BS24 57 aa6.98□□□□□ -1.29
CDKN3-209ENST00000556102 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
CDKN3-209ENST00000556102 A0A0D9SG42 100 aa6.86□□□□□ -1.31
CDKN3-209ENST00000556102 K7ERU9 68 aa6.86□□□□□ -1.31
CDKN3-209ENST00000556102 MT1GP13640 62 aa6.84□□□□□ -1.31
CDKN3-209ENST00000556102 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
CDKN3-209ENST00000556102 COA5Q86WW8 74 aa6.82□□□□□ -1.32
CDKN3-209ENST00000556102 SEC61GP60059 68 aa6.81□□□□□ -1.32
CDKN3-209ENST00000556102 LCE1DQ5T752 114 aa6.81□□□□□ -1.32
CDKN3-209ENST00000556102 SERP1Q9Y6X1 66 aa6.81□□□□□ -1.32
CDKN3-209ENST00000556102 SPATA8Q6RVD6 105 aa6.79□□□□□ -1.32
CDKN3-209ENST00000556102 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
CDKN3-209ENST00000556102 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
CDKN3-209ENST00000556102 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
CDKN3-209ENST00000556102 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
CDKN3-209ENST00000556102 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
CDKN3-209ENST00000556102 HMCN1Q96RW7 5635 aa6.73□□□□□ -1.33
CDKN3-209ENST00000556102 A0A1B0GU33 70 aa6.72□□□□□ -1.33
CDKN3-209ENST00000556102 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
CDKN3-209ENST00000556102 MT1MQ8N339 61 aa6.72□□□□□ -1.33
CDKN3-209ENST00000556102 MT4P47944 62 aa6.69□□□□□ -1.34
CDKN3-209ENST00000556102 MT1LQ93083 61 aa6.67□□□□□ -1.34
CDKN3-209ENST00000556102 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
CDKN3-209ENST00000556102 AHNAK2Q8IVF2 5795 aa6.6□□□□□ -1.35
CDKN3-209ENST00000556102 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
CDKN3-209ENST00000556102 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms