RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 LINC01554Q52M75 96 aa3.57□□□□□ -1.84
PSEN1-216ENST00000556066 COX6B2Q6YFQ2 88 aa3.57□□□□□ -1.84
PSEN1-216ENST00000556066 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
PSEN1-216ENST00000556066 BPY2O14599 106 aa3.56□□□□□ -1.84
PSEN1-216ENST00000556066 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
PSEN1-216ENST00000556066 COX7CP15954 63 aa3.56□□□□□ -1.84
PSEN1-216ENST00000556066 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
PSEN1-216ENST00000556066 Q8N9L7 120 aa3.56□□□□□ -1.84
PSEN1-216ENST00000556066 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
PSEN1-216ENST00000556066 DEFB116Q30KQ4 102 aa3.54□□□□□ -1.84
PSEN1-216ENST00000556066 SERP1Q9Y6X1 66 aa3.54□□□□□ -1.84
PSEN1-216ENST00000556066 DSCR10P59022 87 aa3.53□□□□□ -1.84
PSEN1-216ENST00000556066 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
PSEN1-216ENST00000556066 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
PSEN1-216ENST00000556066 A0A087WSZ3 146 aa3.52□□□□□ -1.85
PSEN1-216ENST00000556066 ATP11AUNQ6ZP68 121 aa3.52□□□□□ -1.85
PSEN1-216ENST00000556066 C7orf65Q6ZTY9 151 aa3.52□□□□□ -1.85
PSEN1-216ENST00000556066 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
PSEN1-216ENST00000556066 TRAV7A0A075B6U4 112 aa3.51□□□□□ -1.85
PSEN1-216ENST00000556066 K7ERS5 55 aa3.51□□□□□ -1.85
PSEN1-216ENST00000556066 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
PSEN1-216ENST00000556066 K7EQZ3 153 aa3.5□□□□□ -1.85
PSEN1-216ENST00000556066 Q96NJ1 140 aa3.5□□□□□ -1.85
PSEN1-216ENST00000556066 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
PSEN1-216ENST00000556066 LINC00472Q9H8W2 130 aa3.49□□□□□ -1.85
PSEN1-216ENST00000556066 USH2AO75445 5202 aa3.48□□□□□ -1.85
PSEN1-216ENST00000556066 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
PSEN1-216ENST00000556066 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
PSEN1-216ENST00000556066 SNURFQ9Y675 71 aa3.47□□□□□ -1.85
PSEN1-216ENST00000556066 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
PSEN1-216ENST00000556066 HCG22E2RYF7 251 aa3.46□□□□□ -1.86
PSEN1-216ENST00000556066 WFDC13Q8IUB5 93 aa3.46□□□□□ -1.86
PSEN1-216ENST00000556066 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
PSEN1-216ENST00000556066 A8MUU9 505 aa3.44□□□□□ -1.86
PSEN1-216ENST00000556066 A8MWP4 228 aa3.44□□□□□ -1.86
PSEN1-216ENST00000556066 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
PSEN1-216ENST00000556066 C20orf166-AS1Q96NR2 134 aa3.44□□□□□ -1.86
PSEN1-216ENST00000556066 KLKP1Q107X0 134 aa3.43□□□□□ -1.86
PSEN1-216ENST00000556066 TMEM254Q8TBM7 123 aa3.43□□□□□ -1.86
PSEN1-216ENST00000556066 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
PSEN1-216ENST00000556066 MMP24-AS1A0A0U1RRL7 71 aa3.42□□□□□ -1.86
PSEN1-216ENST00000556066 H7BZZ5 65 aa3.42□□□□□ -1.86
PSEN1-216ENST00000556066 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
PSEN1-216ENST00000556066 NDUFB1O75438 58 aa3.41□□□□□ -1.86
PSEN1-216ENST00000556066 ATP5EP56381 51 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-216ENST00000556066 A6NED7 52 aa3.39□□□□□ -1.87
PSEN1-216ENST00000556066 hDV103S1A0JD37 113 aa3.38□□□□□ -1.87
PSEN1-216ENST00000556066 ZCCHC13Q8WW36 166 aaKnown RBP3.38□□□□□ -1.87
PSEN1-216ENST00000556066 A6NN06 94 aa3.37□□□□□ -1.87
PSEN1-216ENST00000556066 H0Y9P7 68 aa3.37□□□□□ -1.87
PSEN1-216ENST00000556066 NDUFC1O43677 76 aa3.37□□□□□ -1.87
PSEN1-216ENST00000556066 ADM2Q7Z4H4 148 aa3.37□□□□□ -1.87
PSEN1-216ENST00000556066 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
PSEN1-216ENST00000556066 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
PSEN1-216ENST00000556066 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
PSEN1-216ENST00000556066 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
PSEN1-216ENST00000556066 HRES1P13985 223 aa3.34□□□□□ -1.87
PSEN1-216ENST00000556066 TRAV22A0A0B4J277 110 aa3.33□□□□□ -1.88
PSEN1-216ENST00000556066 MT2AP02795 61 aa3.33□□□□□ -1.88
PSEN1-216ENST00000556066 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
PSEN1-216ENST00000556066 H3BPC8 53 aa3.32□□□□□ -1.88
PSEN1-216ENST00000556066 C1orf64Q8NEQ6 169 aa3.32□□□□□ -1.88
PSEN1-216ENST00000556066 TP53AIP1Q9HCN2 124 aa3.32□□□□□ -1.88
PSEN1-216ENST00000556066 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
PSEN1-216ENST00000556066 Q5W150 140 aa3.31□□□□□ -1.88
PSEN1-216ENST00000556066 MT1FP04733 61 aa3.3□□□□□ -1.88
PSEN1-216ENST00000556066 SPINK7P58062 85 aa3.3□□□□□ -1.88
PSEN1-216ENST00000556066 Q1T7F1 81 aa3.29□□□□□ -1.88
PSEN1-216ENST00000556066 NEBP20929 6669 aa3.28□□□□□ -1.88
PSEN1-216ENST00000556066 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
PSEN1-216ENST00000556066 CYP4F30PQ9H0H9 118 aa3.28□□□□□ -1.88
PSEN1-216ENST00000556066 ROMO1P60602 79 aa3.27□□□□□ -1.89
PSEN1-216ENST00000556066 MT3P25713 68 aa3.25□□□□□ -1.89
PSEN1-216ENST00000556066 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
PSEN1-216ENST00000556066 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
PSEN1-216ENST00000556066 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
PSEN1-216ENST00000556066 COA5Q86WW8 74 aa3.2□□□□□ -1.9
PSEN1-216ENST00000556066 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
PSEN1-216ENST00000556066 A0A1B0GU33 70 aa3.18□□□□□ -1.9
PSEN1-216ENST00000556066 H1FX-AS1Q4G0G2 97 aa3.18□□□□□ -1.9
PSEN1-216ENST00000556066 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.91
PSEN1-216ENST00000556066 ACYP2P14621 99 aa3.14□□□□□ -1.91
PSEN1-216ENST00000556066 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
PSEN1-216ENST00000556066 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
PSEN1-216ENST00000556066 DMAC1Q96GE9 116 aa3.14□□□□□ -1.91
PSEN1-216ENST00000556066 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
PSEN1-216ENST00000556066 SPTSSBQ8NFR3 76 aa3.12□□□□□ -1.91
PSEN1-216ENST00000556066 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
PSEN1-216ENST00000556066 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
PSEN1-216ENST00000556066 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
PSEN1-216ENST00000556066 Q5VV11 94 aa3.1□□□□□ -1.91
PSEN1-216ENST00000556066 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
PSEN1-216ENST00000556066 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
PSEN1-216ENST00000556066 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PSEN1-216ENST00000556066 P0C880 135 aa3.07□□□□□ -1.92
PSEN1-216ENST00000556066 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
PSEN1-216ENST00000556066 S4R3F8 94 aa3.06□□□□□ -1.92
PSEN1-216ENST00000556066 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
PSEN1-216ENST00000556066 A8MU10 97 aa3.04□□□□□ -1.92
PSEN1-216ENST00000556066 CSAG1Q6PB30 78 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms