RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 DNAH2Q9P225 4427 aa5.63□□□□□ -1.51
EFCAB11-208ENST00000555872 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
EFCAB11-208ENST00000555872 HECTD4Q9Y4D8 3996 aa5.6□□□□□ -1.51
EFCAB11-208ENST00000555872 KRTAP9-2Q9BYQ4 174 aa5.56□□□□□ -1.52
EFCAB11-208ENST00000555872 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
EFCAB11-208ENST00000555872 KRTAP13-2Q52LG2 175 aa5.51□□□□□ -1.53
EFCAB11-208ENST00000555872 FAT2Q9NYQ8 4349 aa5.51□□□□□ -1.53
EFCAB11-208ENST00000555872 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
EFCAB11-208ENST00000555872 SACSQ9NZJ4 4579 aa5.5□□□□□ -1.53
EFCAB11-208ENST00000555872 PKD1P98161 4303 aa5.5□□□□□ -1.53
EFCAB11-208ENST00000555872 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
EFCAB11-208ENST00000555872 COX6B2Q6YFQ2 88 aa5.49□□□□□ -1.53
EFCAB11-208ENST00000555872 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
EFCAB11-208ENST00000555872 DNAH5Q8TE73 4624 aa5.48□□□□□ -1.53
EFCAB11-208ENST00000555872 KRTAP10-1P60331 282 aa5.46□□□□□ -1.54
EFCAB11-208ENST00000555872 A0A1B0GVY2 172 aa5.46□□□□□ -1.54
EFCAB11-208ENST00000555872 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
EFCAB11-208ENST00000555872 A0A0D9SG42 100 aa5.4□□□□□ -1.54
EFCAB11-208ENST00000555872 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
EFCAB11-208ENST00000555872 RYR1P21817 5038 aa5.4□□□□□ -1.54
EFCAB11-208ENST00000555872 LRP1BQ9NZR2 4599 aa5.4□□□□□ -1.55
EFCAB11-208ENST00000555872 FAT3Q8TDW7 4589 aa5.37□□□□□ -1.55
EFCAB11-208ENST00000555872 R4GN34 69 aa5.35□□□□□ -1.55
EFCAB11-208ENST00000555872 KRTAP10-8P60410 259 aa5.34□□□□□ -1.55
EFCAB11-208ENST00000555872 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
EFCAB11-208ENST00000555872 KRTAP1-4P0C5Y4 121 aa5.33□□□□□ -1.56
EFCAB11-208ENST00000555872 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
EFCAB11-208ENST00000555872 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
EFCAB11-208ENST00000555872 PLAC4Q8WY50 150 aa5.32□□□□□ -1.56
EFCAB11-208ENST00000555872 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
EFCAB11-208ENST00000555872 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
EFCAB11-208ENST00000555872 VPS13BQ7Z7G8 4022 aa5.27□□□□□ -1.57
EFCAB11-208ENST00000555872 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
EFCAB11-208ENST00000555872 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
EFCAB11-208ENST00000555872 S4R3F8 94 aa5.24□□□□□ -1.57
EFCAB11-208ENST00000555872 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
EFCAB11-208ENST00000555872 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
EFCAB11-208ENST00000555872 XP32Q5T750 250 aa5.21□□□□□ -1.58
EFCAB11-208ENST00000555872 KRTAP12-2P59991 146 aa5.21□□□□□ -1.58
EFCAB11-208ENST00000555872 PKHD1L1Q86WI1 4243 aa5.19□□□□□ -1.58
EFCAB11-208ENST00000555872 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
EFCAB11-208ENST00000555872 RPS29P62273 56 aaKnown RBP5.15□□□□□ -1.58
EFCAB11-208ENST00000555872 Q5VSD8 79 aa5.14□□□□□ -1.59
EFCAB11-208ENST00000555872 HSPG2P98160 4391 aa5.12□□□□□ -1.59
EFCAB11-208ENST00000555872 HERC1Q15751 4861 aa5.11□□□□□ -1.59
EFCAB11-208ENST00000555872 FAT1Q14517 4588 aa5.11□□□□□ -1.59
EFCAB11-208ENST00000555872 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
EFCAB11-208ENST00000555872 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
EFCAB11-208ENST00000555872 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
EFCAB11-208ENST00000555872 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
EFCAB11-208ENST00000555872 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
EFCAB11-208ENST00000555872 INE1O15225 51 aa4.99□□□□□ -1.61
EFCAB11-208ENST00000555872 TNXBP22105 4242 aa4.99□□□□□ -1.61
EFCAB11-208ENST00000555872 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
EFCAB11-208ENST00000555872 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
EFCAB11-208ENST00000555872 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
EFCAB11-208ENST00000555872 M0QZ58 72 aa4.92□□□□□ -1.62
EFCAB11-208ENST00000555872 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
EFCAB11-208ENST00000555872 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
EFCAB11-208ENST00000555872 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
EFCAB11-208ENST00000555872 HMCN2Q8NDA2 5059 aa4.86□□□□□ -1.63
EFCAB11-208ENST00000555872 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
EFCAB11-208ENST00000555872 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
EFCAB11-208ENST00000555872 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
EFCAB11-208ENST00000555872 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
EFCAB11-208ENST00000555872 LPAP08519 4548 aa4.76□□□□□ -1.65
EFCAB11-208ENST00000555872 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
EFCAB11-208ENST00000555872 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
EFCAB11-208ENST00000555872 MUC2Q02817 5179 aa4.65□□□□□ -1.66
EFCAB11-208ENST00000555872 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
EFCAB11-208ENST00000555872 RNF213Q63HN8 5207 aa4.61□□□□□ -1.67
EFCAB11-208ENST00000555872 LRP2P98164 4655 aa4.61□□□□□ -1.67
EFCAB11-208ENST00000555872 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
EFCAB11-208ENST00000555872 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
EFCAB11-208ENST00000555872 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
EFCAB11-208ENST00000555872 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
EFCAB11-208ENST00000555872 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
EFCAB11-208ENST00000555872 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
EFCAB11-208ENST00000555872 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
EFCAB11-208ENST00000555872 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
EFCAB11-208ENST00000555872 TNP1P09430 55 aa4.44□□□□□ -1.7
EFCAB11-208ENST00000555872 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
EFCAB11-208ENST00000555872 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
EFCAB11-208ENST00000555872 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
EFCAB11-208ENST00000555872 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
EFCAB11-208ENST00000555872 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
EFCAB11-208ENST00000555872 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
EFCAB11-208ENST00000555872 NEBP20929 6669 aa4.19□□□□□ -1.74
EFCAB11-208ENST00000555872 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
EFCAB11-208ENST00000555872 MT1HP80294 61 aa4.17□□□□□ -1.74
EFCAB11-208ENST00000555872 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
EFCAB11-208ENST00000555872 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
EFCAB11-208ENST00000555872 M0R2T5 61 aa4.09□□□□□ -1.75
EFCAB11-208ENST00000555872 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
EFCAB11-208ENST00000555872 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
EFCAB11-208ENST00000555872 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
EFCAB11-208ENST00000555872 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
EFCAB11-208ENST00000555872 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
EFCAB11-208ENST00000555872 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
EFCAB11-208ENST00000555872 MT2AP02795 61 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms