RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
SNX6-205ENST00000555648 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
SNX6-205ENST00000555648 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
SNX6-205ENST00000555648 UQCRQO14949 82 aa6.86□□□□□ -1.31
SNX6-205ENST00000555648 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
SNX6-205ENST00000555648 ATOX1O00244 68 aa6.85□□□□□ -1.31
SNX6-205ENST00000555648 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
SNX6-205ENST00000555648 NDUFC1O43677 76 aa6.84□□□□□ -1.31
SNX6-205ENST00000555648 FAM240AA0A1B0GVK7 77 aa6.83□□□□□ -1.32
SNX6-205ENST00000555648 H0Y9P7 68 aa6.83□□□□□ -1.32
SNX6-205ENST00000555648 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
SNX6-205ENST00000555648 A0A087WVE0 104 aa6.82□□□□□ -1.32
SNX6-205ENST00000555648 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
SNX6-205ENST00000555648 A8MUN3 132 aa6.75□□□□□ -1.33
SNX6-205ENST00000555648 H0YAA0 97 aa6.73□□□□□ -1.33
SNX6-205ENST00000555648 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
SNX6-205ENST00000555648 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
SNX6-205ENST00000555648 MP68P56378 58 aa6.71□□□□□ -1.34
SNX6-205ENST00000555648 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
SNX6-205ENST00000555648 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
SNX6-205ENST00000555648 KRTAP4-12Q9BQ66 201 aa6.6□□□□□ -1.35
SNX6-205ENST00000555648 OCR1Q9BZK8 76 aa6.6□□□□□ -1.35
SNX6-205ENST00000555648 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
SNX6-205ENST00000555648 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
SNX6-205ENST00000555648 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
SNX6-205ENST00000555648 R4GN34 69 aa6.57□□□□□ -1.36
SNX6-205ENST00000555648 H3BPC8 53 aa6.56□□□□□ -1.36
SNX6-205ENST00000555648 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
SNX6-205ENST00000555648 NEBP20929 6669 aa6.56□□□□□ -1.36
SNX6-205ENST00000555648 SCGB1A1P11684 91 aa6.55□□□□□ -1.36
SNX6-205ENST00000555648 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
SNX6-205ENST00000555648 J3QR89 54 aa6.53□□□□□ -1.36
SNX6-205ENST00000555648 A0A1B0GV90 55 aa6.5□□□□□ -1.37
SNX6-205ENST00000555648 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
SNX6-205ENST00000555648 M0QZ58 72 aa6.49□□□□□ -1.37
SNX6-205ENST00000555648 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
SNX6-205ENST00000555648 P0C880 135 aa6.48□□□□□ -1.37
SNX6-205ENST00000555648 MT1XP80297 61 aa6.45□□□□□ -1.38
SNX6-205ENST00000555648 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
SNX6-205ENST00000555648 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
SNX6-205ENST00000555648 H3BS24 57 aa6.43□□□□□ -1.38
SNX6-205ENST00000555648 KMT2DO14686 5537 aa6.4□□□□□ -1.38
SNX6-205ENST00000555648 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
SNX6-205ENST00000555648 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
SNX6-205ENST00000555648 SPRR2EP22531 72 aa6.38□□□□□ -1.39
SNX6-205ENST00000555648 SPRR2BP35325 72 aa6.38□□□□□ -1.39
SNX6-205ENST00000555648 SPRR2AP35326 72 aa6.38□□□□□ -1.39
SNX6-205ENST00000555648 ACYP2P14621 99 aa6.37□□□□□ -1.39
SNX6-205ENST00000555648 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
SNX6-205ENST00000555648 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
SNX6-205ENST00000555648 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
SNX6-205ENST00000555648 KRTAP2-3P0C7H8 128 aa6.35□□□□□ -1.39
SNX6-205ENST00000555648 KRTAP2-4Q9BYR9 128 aa6.35□□□□□ -1.39
SNX6-205ENST00000555648 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
SNX6-205ENST00000555648 MT-ATP8P03928 68 aa6.32□□□□□ -1.4
SNX6-205ENST00000555648 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
SNX6-205ENST00000555648 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
SNX6-205ENST00000555648 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
SNX6-205ENST00000555648 KRTAP4-8A0A0G2JLE6 195 aa6.24□□□□□ -1.41
SNX6-205ENST00000555648 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
SNX6-205ENST00000555648 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
SNX6-205ENST00000555648 K7ERU9 68 aa6.19□□□□□ -1.42
SNX6-205ENST00000555648 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
SNX6-205ENST00000555648 SPRR2DP22532 72 aa6.16□□□□□ -1.42
SNX6-205ENST00000555648 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
SNX6-205ENST00000555648 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
SNX6-205ENST00000555648 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
SNX6-205ENST00000555648 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
SNX6-205ENST00000555648 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
SNX6-205ENST00000555648 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
SNX6-205ENST00000555648 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
SNX6-205ENST00000555648 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
SNX6-205ENST00000555648 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
SNX6-205ENST00000555648 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
SNX6-205ENST00000555648 SEC61GP60059 68 aa5.98□□□□□ -1.45
SNX6-205ENST00000555648 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
SNX6-205ENST00000555648 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
SNX6-205ENST00000555648 COA5Q86WW8 74 aa5.93□□□□□ -1.46
SNX6-205ENST00000555648 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
SNX6-205ENST00000555648 A0A0D9SG42 100 aa5.89□□□□□ -1.47
SNX6-205ENST00000555648 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
SNX6-205ENST00000555648 A0A1B0GU33 70 aa5.81□□□□□ -1.48
SNX6-205ENST00000555648 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
SNX6-205ENST00000555648 COX7CP15954 63 aa5.78□□□□□ -1.48
SNX6-205ENST00000555648 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
SNX6-205ENST00000555648 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
SNX6-205ENST00000555648 MT1EP04732 61 aa5.74□□□□□ -1.49
SNX6-205ENST00000555648 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
SNX6-205ENST00000555648 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
SNX6-205ENST00000555648 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
SNX6-205ENST00000555648 H7BZZ5 65 aa5.69□□□□□ -1.5
SNX6-205ENST00000555648 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
SNX6-205ENST00000555648 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
SNX6-205ENST00000555648 A0A1B0GU69 56 aa5.68□□□□□ -1.5
SNX6-205ENST00000555648 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
SNX6-205ENST00000555648 CYSTM1Q9H1C7 97 aa5.64□□□□□ -1.51
SNX6-205ENST00000555648 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
SNX6-205ENST00000555648 MT1GP13640 62 aa5.6□□□□□ -1.51
SNX6-205ENST00000555648 A8MU10 97 aa5.56□□□□□ -1.52
SNX6-205ENST00000555648 ANAPC13Q9BS18 74 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms