RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.37
ARHGEF40-206ENST00000555232 C20orf166-AS1Q96NR2 134 aa6.46□□□□□ -1.38
ARHGEF40-206ENST00000555232 RPL37P61927 97 aaKnown RBP6.45□□□□□ -1.38
ARHGEF40-206ENST00000555232 H0YAA0 97 aa6.45□□□□□ -1.38
ARHGEF40-206ENST00000555232 RYR3Q15413 4870 aa6.44□□□□□ -1.38
ARHGEF40-206ENST00000555232 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
ARHGEF40-206ENST00000555232 ALMS1Q8TCU4 4167 aa6.43□□□□□ -1.38
ARHGEF40-206ENST00000555232 P0C880 135 aa6.43□□□□□ -1.38
ARHGEF40-206ENST00000555232 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
ARHGEF40-206ENST00000555232 R4GN34 69 aa6.42□□□□□ -1.38
ARHGEF40-206ENST00000555232 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
ARHGEF40-206ENST00000555232 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
ARHGEF40-206ENST00000555232 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
ARHGEF40-206ENST00000555232 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
ARHGEF40-206ENST00000555232 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.38
ARHGEF40-206ENST00000555232 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.39
ARHGEF40-206ENST00000555232 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
ARHGEF40-206ENST00000555232 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
ARHGEF40-206ENST00000555232 M0QZ58 72 aa6.36□□□□□ -1.39
ARHGEF40-206ENST00000555232 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
ARHGEF40-206ENST00000555232 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
ARHGEF40-206ENST00000555232 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
ARHGEF40-206ENST00000555232 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
ARHGEF40-206ENST00000555232 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
ARHGEF40-206ENST00000555232 RYR2Q92736 4967 aa6.21□□□□□ -1.41
ARHGEF40-206ENST00000555232 FAT2Q9NYQ8 4349 aa6.21□□□□□ -1.41
ARHGEF40-206ENST00000555232 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
ARHGEF40-206ENST00000555232 LRP2P98164 4655 aa6.15□□□□□ -1.42
ARHGEF40-206ENST00000555232 EPPK1P58107 5090 aaKnown RBP6.12□□□□□ -1.43
ARHGEF40-206ENST00000555232 PKD1P98161 4303 aa6.08□□□□□ -1.44
ARHGEF40-206ENST00000555232 HERC2O95714 4834 aa6.06□□□□□ -1.44
ARHGEF40-206ENST00000555232 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
ARHGEF40-206ENST00000555232 HSPG2P98160 4391 aa5.99□□□□□ -1.45
ARHGEF40-206ENST00000555232 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
ARHGEF40-206ENST00000555232 LPAP08519 4548 aa5.98□□□□□ -1.45
ARHGEF40-206ENST00000555232 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
ARHGEF40-206ENST00000555232 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
ARHGEF40-206ENST00000555232 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
ARHGEF40-206ENST00000555232 MUC2Q02817 5179 aa5.88□□□□□ -1.47
ARHGEF40-206ENST00000555232 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
ARHGEF40-206ENST00000555232 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
ARHGEF40-206ENST00000555232 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
ARHGEF40-206ENST00000555232 PCLOQ9Y6V0 5065 aa5.84□□□□□ -1.47
ARHGEF40-206ENST00000555232 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
ARHGEF40-206ENST00000555232 HERC1Q15751 4861 aa5.81□□□□□ -1.48
ARHGEF40-206ENST00000555232 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
ARHGEF40-206ENST00000555232 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
ARHGEF40-206ENST00000555232 LORP23490 312 aaPredicted RBP5.76□□□□□ -1.49
ARHGEF40-206ENST00000555232 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
ARHGEF40-206ENST00000555232 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
ARHGEF40-206ENST00000555232 TNP1P09430 55 aa5.71□□□□□ -1.5
ARHGEF40-206ENST00000555232 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.5
ARHGEF40-206ENST00000555232 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
ARHGEF40-206ENST00000555232 UBR4Q5T4S7 5183 aa5.62□□□□□ -1.51
ARHGEF40-206ENST00000555232 TNXBP22105 4242 aa5.61□□□□□ -1.51
ARHGEF40-206ENST00000555232 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
ARHGEF40-206ENST00000555232 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
ARHGEF40-206ENST00000555232 MT1HP80294 61 aa5.32□□□□□ -1.56
ARHGEF40-206ENST00000555232 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
ARHGEF40-206ENST00000555232 MT1FP04733 61 aa5.24□□□□□ -1.57
ARHGEF40-206ENST00000555232 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
ARHGEF40-206ENST00000555232 MT2AP02795 61 aa5.22□□□□□ -1.57
ARHGEF40-206ENST00000555232 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
ARHGEF40-206ENST00000555232 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
ARHGEF40-206ENST00000555232 USH2AO75445 5202 aa5.12□□□□□ -1.59
ARHGEF40-206ENST00000555232 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
ARHGEF40-206ENST00000555232 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
ARHGEF40-206ENST00000555232 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
ARHGEF40-206ENST00000555232 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
ARHGEF40-206ENST00000555232 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
ARHGEF40-206ENST00000555232 KRTAP10-12P60413 245 aa5.03□□□□□ -1.6
ARHGEF40-206ENST00000555232 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
ARHGEF40-206ENST00000555232 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
ARHGEF40-206ENST00000555232 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
ARHGEF40-206ENST00000555232 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
ARHGEF40-206ENST00000555232 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
ARHGEF40-206ENST00000555232 KMT2DO14686 5537 aa4.86□□□□□ -1.63
ARHGEF40-206ENST00000555232 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
ARHGEF40-206ENST00000555232 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
ARHGEF40-206ENST00000555232 MT1BP07438 61 aa4.83□□□□□ -1.64
ARHGEF40-206ENST00000555232 INE1O15225 51 aa4.8□□□□□ -1.64
ARHGEF40-206ENST00000555232 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
ARHGEF40-206ENST00000555232 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
ARHGEF40-206ENST00000555232 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
ARHGEF40-206ENST00000555232 MT1XP80297 61 aa4.77□□□□□ -1.65
ARHGEF40-206ENST00000555232 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
ARHGEF40-206ENST00000555232 LCE2BO14633 110 aa4.76□□□□□ -1.65
ARHGEF40-206ENST00000555232 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
ARHGEF40-206ENST00000555232 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
ARHGEF40-206ENST00000555232 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.66
ARHGEF40-206ENST00000555232 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
ARHGEF40-206ENST00000555232 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
ARHGEF40-206ENST00000555232 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
ARHGEF40-206ENST00000555232 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
ARHGEF40-206ENST00000555232 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
ARHGEF40-206ENST00000555232 SPRR2FQ96RM1 72 aa4.53□□□□□ -1.68
ARHGEF40-206ENST00000555232 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
ARHGEF40-206ENST00000555232 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
ARHGEF40-206ENST00000555232 SYNE2Q8WXH0 6885 aaKnown RBP4.44□□□□□ -1.7
ARHGEF40-206ENST00000555232 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms