RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PRLHP81277 87 aa1.52□□□□□ -2.17
CKS1BP1-201ENST00000555221 LINC00575Q6W349 94 aa1.52□□□□□ -2.17
CKS1BP1-201ENST00000555221 SMIM11BQ8TCY0 68 aa1.52□□□□□ -2.17
CKS1BP1-201ENST00000555221 SS18L2Q9UHA2 77 aa1.52□□□□□ -2.17
CKS1BP1-201ENST00000555221 USH2AO75445 5202 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 IGLV5-48A0A075B6I7 105 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 PYY3Q5JQD4 70 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 C9orf153Q5TBE3 101 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 Q5XG85 94 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 SOSTDC1Q6X4U4 206 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 DEFB105AQ8NG35 78 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 ORMDL1Q9P0S3 153 aa1.51□□□□□ -2.17
CKS1BP1-201ENST00000555221 JMJD7-PLA2G4BH0Y9G9 81 aa1.5□□□□□ -2.17
CKS1BP1-201ENST00000555221 TRACP01848 142 aa1.5□□□□□ -2.17
CKS1BP1-201ENST00000555221 FABP2P12104 132 aa1.5□□□□□ -2.17
CKS1BP1-201ENST00000555221 TEN1Q86WV5 123 aa1.5□□□□□ -2.17
CKS1BP1-201ENST00000555221 DSCR8Q96T75 97 aa1.5□□□□□ -2.17
CKS1BP1-201ENST00000555221 LRP1Q07954 4544 aaKnown RBP1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 H3BMG7 143 aa1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 TAX1BP3O14907 124 aa1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 MT1HL1P0DM35 61 aa1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 RBM3P98179 157 aaKnown RBP1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 ATXN8Q156A1 80 aa1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 Q6ZQY7 126 aa1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 CLEC2BQ92478 149 aa1.49□□□□□ -2.17
CKS1BP1-201ENST00000555221 DNAH8Q96JB1 4490 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 TRBV7-4A0A0J9YYF1 115 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 C9JAW5 83 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 J3KT08 172 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 NDUFB1O75438 58 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 ERC2-IT1O76042 136 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 ASB16-AS1Q495Z4 193 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 COL5A1-AS1Q5SY13 56 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 TMEM254Q8TBM7 123 aa1.48□□□□□ -2.17
CKS1BP1-201ENST00000555221 GTF2H5Q6ZYL4 71 aa1.47□□□□□ -2.17
CKS1BP1-201ENST00000555221 KMT2DO14686 5537 aa1.46□□□□□ -2.18
CKS1BP1-201ENST00000555221 TRBV7-7A0A0K0K1E9 115 aa1.46□□□□□ -2.18
CKS1BP1-201ENST00000555221 INE1O15225 51 aa1.46□□□□□ -2.18
CKS1BP1-201ENST00000555221 OBSCN-AS1Q96MR7 158 aa1.46□□□□□ -2.18
CKS1BP1-201ENST00000555221 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
CKS1BP1-201ENST00000555221 LOC105371267A0A1B0GV96 52 aa1.45□□□□□ -2.18
CKS1BP1-201ENST00000555221 CCKP06307 115 aa1.45□□□□□ -2.18
CKS1BP1-201ENST00000555221 HRCT1Q6UXD1 115 aa1.45□□□□□ -2.18
CKS1BP1-201ENST00000555221 ATP11AUNQ6ZP68 121 aa1.45□□□□□ -2.18
CKS1BP1-201ENST00000555221 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
CKS1BP1-201ENST00000555221 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
CKS1BP1-201ENST00000555221 A0A1W2PPM0 123 aa1.44□□□□□ -2.18
CKS1BP1-201ENST00000555221 F8W1H4 67 aa1.44□□□□□ -2.18
CKS1BP1-201ENST00000555221 H3BUT2 72 aa1.44□□□□□ -2.18
CKS1BP1-201ENST00000555221 NREPQ16612 68 aa1.44□□□□□ -2.18
CKS1BP1-201ENST00000555221 CDC42SE1Q9NRR8 79 aa1.44□□□□□ -2.18
CKS1BP1-201ENST00000555221 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 A0A087WSZ3 146 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 J3QR89 54 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 K7ERJ3 54 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 ACYP1P07311 99 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 VPS25Q9BRG1 176 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 UBL5Q9BZL1 73 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 SPCS1Q9Y6A9 102 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 TNXBP22105 4242 aa1.43□□□□□ -2.18
CKS1BP1-201ENST00000555221 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
CKS1BP1-201ENST00000555221 Q96NJ1 140 aa1.42□□□□□ -2.18
CKS1BP1-201ENST00000555221 LINC00472Q9H8W2 130 aa1.41□□□□□ -2.18
CKS1BP1-201ENST00000555221 K7EP34 96 aa1.4□□□□□ -2.19
CKS1BP1-201ENST00000555221 ROMO1P60602 79 aa1.4□□□□□ -2.19
CKS1BP1-201ENST00000555221 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 ATP5EP2Q5VTU8 51 aa1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 WFDC13Q8IUB5 93 aa1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 PRR15Q8IV56 129 aa1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
CKS1BP1-201ENST00000555221 A0A1B0GV72 72 aa1.38□□□□□ -2.19
CKS1BP1-201ENST00000555221 hDV103S1A0JD37 113 aa1.38□□□□□ -2.19
CKS1BP1-201ENST00000555221 ETDBQ3ZM63 59 aa1.37□□□□□ -2.19
CKS1BP1-201ENST00000555221 CASC2Q6XLA1 102 aa1.37□□□□□ -2.19
CKS1BP1-201ENST00000555221 MRPL34Q9BQ48 92 aaKnown RBP1.37□□□□□ -2.19
CKS1BP1-201ENST00000555221 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
CKS1BP1-201ENST00000555221 K7ERU9 68 aa1.36□□□□□ -2.19
CKS1BP1-201ENST00000555221 ATOX1O00244 68 aa1.36□□□□□ -2.19
CKS1BP1-201ENST00000555221 LINC00643Q86TS7 51 aa1.36□□□□□ -2.19
CKS1BP1-201ENST00000555221 HCG22E2RYF7 251 aa1.35□□□□□ -2.19
CKS1BP1-201ENST00000555221 M0R2T5 61 aa1.35□□□□□ -2.19
CKS1BP1-201ENST00000555221 SCGB1A1P11684 91 aa1.35□□□□□ -2.19
CKS1BP1-201ENST00000555221 SMIM20Q8N5G0 67 aa1.35□□□□□ -2.19
CKS1BP1-201ENST00000555221 LINC00846Q9NV44 126 aa1.35□□□□□ -2.19
CKS1BP1-201ENST00000555221 UQCRQO14949 82 aa1.34□□□□□ -2.19
CKS1BP1-201ENST00000555221 SPINK7P58062 85 aa1.34□□□□□ -2.19
CKS1BP1-201ENST00000555221 LPAP08519 4548 aa1.34□□□□□ -2.2
CKS1BP1-201ENST00000555221 K7EQZ3 153 aa1.33□□□□□ -2.2
CKS1BP1-201ENST00000555221 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
CKS1BP1-201ENST00000555221 MMP24-AS1A0A0U1RRL7 71 aa1.32□□□□□ -2.2
CKS1BP1-201ENST00000555221 LOC101927531A0A1B0GV80 90 aa1.32□□□□□ -2.2
CKS1BP1-201ENST00000555221 TRAV22A0A0B4J277 110 aa1.31□□□□□ -2.2
CKS1BP1-201ENST00000555221 A0A1B0GV90 55 aa1.31□□□□□ -2.2
CKS1BP1-201ENST00000555221 H1FX-AS1Q4G0G2 97 aa1.31□□□□□ -2.2
CKS1BP1-201ENST00000555221 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
CKS1BP1-201ENST00000555221 CSAG1Q6PB30 78 aa1.3□□□□□ -2.2
CKS1BP1-201ENST00000555221 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
CKS1BP1-201ENST00000555221 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms