RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 C20orf166-AS1Q96NR2 134 aa7.95□□□□□ -1.14
XRCC3-211ENST00000555055 A8MUU9 505 aa7.94□□□□□ -1.14
XRCC3-211ENST00000555055 KRTAP10-8P60410 259 aa7.94□□□□□ -1.14
XRCC3-211ENST00000555055 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
XRCC3-211ENST00000555055 H0YAA0 97 aa7.91□□□□□ -1.14
XRCC3-211ENST00000555055 LPAP08519 4548 aa7.9□□□□□ -1.14
XRCC3-211ENST00000555055 KRTAP25-1Q3LHN0 102 aa7.85□□□□□ -1.15
XRCC3-211ENST00000555055 LRP2P98164 4655 aa7.84□□□□□ -1.15
XRCC3-211ENST00000555055 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
XRCC3-211ENST00000555055 A0A1B0GU33 70 aa7.83□□□□□ -1.16
XRCC3-211ENST00000555055 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
XRCC3-211ENST00000555055 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
XRCC3-211ENST00000555055 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
XRCC3-211ENST00000555055 ROMO1P60602 79 aa7.81□□□□□ -1.16
XRCC3-211ENST00000555055 XP32Q5T750 250 aa7.77□□□□□ -1.17
XRCC3-211ENST00000555055 K7ERS5 55 aa7.71□□□□□ -1.18
XRCC3-211ENST00000555055 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
XRCC3-211ENST00000555055 HERC2O95714 4834 aa7.65□□□□□ -1.18
XRCC3-211ENST00000555055 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.19
XRCC3-211ENST00000555055 P0C880 135 aa7.61□□□□□ -1.19
XRCC3-211ENST00000555055 CRIPTQ9P021 101 aa7.59□□□□□ -1.2
XRCC3-211ENST00000555055 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
XRCC3-211ENST00000555055 MUC2Q02817 5179 aa7.5□□□□□ -1.21
XRCC3-211ENST00000555055 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
XRCC3-211ENST00000555055 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
XRCC3-211ENST00000555055 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
XRCC3-211ENST00000555055 HERC1Q15751 4861 aa7.43□□□□□ -1.22
XRCC3-211ENST00000555055 J3QL48 77 aa7.43□□□□□ -1.22
XRCC3-211ENST00000555055 S4R3F8 94 aa7.43□□□□□ -1.22
XRCC3-211ENST00000555055 PCLOQ9Y6V0 5065 aa7.42□□□□□ -1.22
XRCC3-211ENST00000555055 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.22
XRCC3-211ENST00000555055 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
XRCC3-211ENST00000555055 KRTAP13-4Q3LI77 160 aa7.38□□□□□ -1.23
XRCC3-211ENST00000555055 MUC17Q685J3 4493 aa7.35□□□□□ -1.23
XRCC3-211ENST00000555055 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
XRCC3-211ENST00000555055 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
XRCC3-211ENST00000555055 A0A0D9SG42 100 aa7.29□□□□□ -1.24
XRCC3-211ENST00000555055 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
XRCC3-211ENST00000555055 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
XRCC3-211ENST00000555055 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
XRCC3-211ENST00000555055 KRTAP12-2P59991 146 aa7.18□□□□□ -1.26
XRCC3-211ENST00000555055 HMCN2Q8NDA2 5059 aa7.16□□□□□ -1.26
XRCC3-211ENST00000555055 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
XRCC3-211ENST00000555055 M0QZ58 72 aa7.13□□□□□ -1.27
XRCC3-211ENST00000555055 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
XRCC3-211ENST00000555055 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
XRCC3-211ENST00000555055 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
XRCC3-211ENST00000555055 UBR4Q5T4S7 5183 aa7.05□□□□□ -1.28
XRCC3-211ENST00000555055 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
XRCC3-211ENST00000555055 KRTAP19-2Q3LHN2 52 aa7.03□□□□□ -1.28
XRCC3-211ENST00000555055 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
XRCC3-211ENST00000555055 R4GN34 69 aa6.92□□□□□ -1.3
XRCC3-211ENST00000555055 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
XRCC3-211ENST00000555055 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
XRCC3-211ENST00000555055 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
XRCC3-211ENST00000555055 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
XRCC3-211ENST00000555055 M0R2T5 61 aa6.65□□□□□ -1.34
XRCC3-211ENST00000555055 MT1HP80294 61 aa6.58□□□□□ -1.36
XRCC3-211ENST00000555055 CAMK2N1Q7Z7J9 78 aa6.55□□□□□ -1.36
XRCC3-211ENST00000555055 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
XRCC3-211ENST00000555055 MT1FP04733 61 aa6.44□□□□□ -1.38
XRCC3-211ENST00000555055 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
XRCC3-211ENST00000555055 KRTAP10-10P60014 251 aa6.42□□□□□ -1.38
XRCC3-211ENST00000555055 MT2AP02795 61 aa6.41□□□□□ -1.38
XRCC3-211ENST00000555055 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
XRCC3-211ENST00000555055 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
XRCC3-211ENST00000555055 SPRR2GQ9BYE4 73 aa6.34□□□□□ -1.39
XRCC3-211ENST00000555055 TNP1P09430 55 aa6.32□□□□□ -1.4
XRCC3-211ENST00000555055 USH2AO75445 5202 aa6.27□□□□□ -1.41
XRCC3-211ENST00000555055 MT1BP07438 61 aa6.12□□□□□ -1.43
XRCC3-211ENST00000555055 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
XRCC3-211ENST00000555055 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
XRCC3-211ENST00000555055 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
XRCC3-211ENST00000555055 MT1XP80297 61 aa6.03□□□□□ -1.44
XRCC3-211ENST00000555055 KMT2DO14686 5537 aa6.01□□□□□ -1.45
XRCC3-211ENST00000555055 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
XRCC3-211ENST00000555055 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
XRCC3-211ENST00000555055 LCE2BO14633 110 aa5.98□□□□□ -1.45
XRCC3-211ENST00000555055 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
XRCC3-211ENST00000555055 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
XRCC3-211ENST00000555055 KRTAP10-7P60409 375 aaPredicted RBP5.91□□□□□ -1.46
XRCC3-211ENST00000555055 INE1O15225 51 aa5.85□□□□□ -1.47
XRCC3-211ENST00000555055 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
XRCC3-211ENST00000555055 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
XRCC3-211ENST00000555055 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
XRCC3-211ENST00000555055 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
XRCC3-211ENST00000555055 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
XRCC3-211ENST00000555055 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
XRCC3-211ENST00000555055 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.52
XRCC3-211ENST00000555055 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
XRCC3-211ENST00000555055 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
XRCC3-211ENST00000555055 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
XRCC3-211ENST00000555055 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
XRCC3-211ENST00000555055 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
XRCC3-211ENST00000555055 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
XRCC3-211ENST00000555055 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.57
XRCC3-211ENST00000555055 MT1EP04732 61 aa5.21□□□□□ -1.57
XRCC3-211ENST00000555055 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
XRCC3-211ENST00000555055 MACF1Q9UPN3 7388 aaKnown RBP5.18□□□□□ -1.58
XRCC3-211ENST00000555055 MT1LQ93083 61 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms