RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 A6NN06 94 aa11.14□□□□□ -0.63
ARHGEF40-204ENST00000555038 MIR22HGQ0VDD5 57 aa11.12□□□□□ -0.63
ARHGEF40-204ENST00000555038 DMBT1Q9UGM3 2413 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF40-204ENST00000555038 KTN1-AS1Q86SY8 53 aa11.03□□□□□ -0.64
ARHGEF40-204ENST00000555038 KRTAP4-5Q9BYR2 181 aa11.03□□□□□ -0.64
ARHGEF40-204ENST00000555038 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
ARHGEF40-204ENST00000555038 TPRXLQ17RH7 258 aa10.97□□□□□ -0.65
ARHGEF40-204ENST00000555038 ABCA13Q86UQ4 5058 aa10.95□□□□□ -0.66
ARHGEF40-204ENST00000555038 A0A1B0GU33 70 aa10.88□□□□□ -0.67
ARHGEF40-204ENST00000555038 H1FX-AS1Q4G0G2 97 aa10.86□□□□□ -0.67
ARHGEF40-204ENST00000555038 PCLOQ9Y6V0 5065 aa10.84□□□□□ -0.67
ARHGEF40-204ENST00000555038 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
ARHGEF40-204ENST00000555038 S4R3F8 94 aa10.81□□□□□ -0.68
ARHGEF40-204ENST00000555038 H0YAA0 97 aa10.8□□□□□ -0.68
ARHGEF40-204ENST00000555038 RBM12B-AS1Q9P1G2 102 aa10.68□□□□□ -0.7
ARHGEF40-204ENST00000555038 LRP2P98164 4655 aa10.65□□□□□ -0.7
ARHGEF40-204ENST00000555038 KRTAP10-6P60371 365 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF40-204ENST00000555038 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
ARHGEF40-204ENST00000555038 SEC61BP60468 96 aaKnown RBP10.57□□□□□ -0.72
ARHGEF40-204ENST00000555038 J3QL48 77 aa10.56□□□□□ -0.72
ARHGEF40-204ENST00000555038 LPAP08519 4548 aa10.54□□□□□ -0.72
ARHGEF40-204ENST00000555038 K7ERS5 55 aa10.54□□□□□ -0.72
ARHGEF40-204ENST00000555038 CSAG1Q6PB30 78 aa10.51□□□□□ -0.73
ARHGEF40-204ENST00000555038 ADM2Q7Z4H4 148 aa10.46□□□□□ -0.74
ARHGEF40-204ENST00000555038 PRAC1Q96KF2 57 aa10.45□□□□□ -0.74
ARHGEF40-204ENST00000555038 P0C880 135 aa10.42□□□□□ -0.74
ARHGEF40-204ENST00000555038 KRTAP13-4Q3LI77 160 aa10.4□□□□□ -0.74
ARHGEF40-204ENST00000555038 HERC1Q15751 4861 aa10.39□□□□□ -0.75
ARHGEF40-204ENST00000555038 MUC17Q685J3 4493 aa10.34□□□□□ -0.75
ARHGEF40-204ENST00000555038 M0QZ58 72 aa10.28□□□□□ -0.76
ARHGEF40-204ENST00000555038 A0A0D9SG42 100 aa10.26□□□□□ -0.77
ARHGEF40-204ENST00000555038 KRTAP4-1Q9BYQ7 146 aa10.21□□□□□ -0.77
ARHGEF40-204ENST00000555038 ROMO1P60602 79 aa10.19□□□□□ -0.78
ARHGEF40-204ENST00000555038 HMCN2Q8NDA2 5059 aa10.19□□□□□ -0.78
ARHGEF40-204ENST00000555038 LINC01554Q52M75 96 aa10.14□□□□□ -0.79
ARHGEF40-204ENST00000555038 KRTAP25-1Q3LHN0 102 aa10.11□□□□□ -0.79
ARHGEF40-204ENST00000555038 KRTAP19-2Q3LHN2 52 aa10.1□□□□□ -0.79
ARHGEF40-204ENST00000555038 KRTAP12-1P59990 96 aa10.07□□□□□ -0.8
ARHGEF40-204ENST00000555038 KRTAP12-2P59991 146 aa10.06□□□□□ -0.8
ARHGEF40-204ENST00000555038 SPINT4Q6UDR6 99 aa10□□□□□ -0.81
ARHGEF40-204ENST00000555038 R4GN34 69 aa10□□□□□ -0.81
ARHGEF40-204ENST00000555038 FLGP20930 4061 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF40-204ENST00000555038 CRIPTQ9P021 101 aa9.83□□□□□ -0.84
ARHGEF40-204ENST00000555038 UBR4Q5T4S7 5183 aa9.83□□□□□ -0.84
ARHGEF40-204ENST00000555038 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
ARHGEF40-204ENST00000555038 MUC2Q02817 5179 aa9.69□□□□□ -0.86
ARHGEF40-204ENST00000555038 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
ARHGEF40-204ENST00000555038 C10orf95Q9H7T3 257 aa9.61□□□□□ -0.87
ARHGEF40-204ENST00000555038 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
ARHGEF40-204ENST00000555038 CAMK2N1Q7Z7J9 78 aa9.45□□□□□ -0.9
ARHGEF40-204ENST00000555038 MT1HP80294 61 aa9.36□□□□□ -0.91
ARHGEF40-204ENST00000555038 M0R2T5 61 aa9.33□□□□□ -0.92
ARHGEF40-204ENST00000555038 SPRR2GQ9BYE4 73 aa9.32□□□□□ -0.92
ARHGEF40-204ENST00000555038 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
ARHGEF40-204ENST00000555038 PP632Q6XCG6 107 aa9.25□□□□□ -0.93
ARHGEF40-204ENST00000555038 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
ARHGEF40-204ENST00000555038 PLAC4Q8WY50 150 aa9.15□□□□□ -0.94
ARHGEF40-204ENST00000555038 MT2AP02795 61 aa9.14□□□□□ -0.95
ARHGEF40-204ENST00000555038 KRTAP15-1Q3LI76 137 aa9.12□□□□□ -0.95
ARHGEF40-204ENST00000555038 TNP1P09430 55 aa9.12□□□□□ -0.95
ARHGEF40-204ENST00000555038 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
ARHGEF40-204ENST00000555038 MT1FP04733 61 aa9.1□□□□□ -0.95
ARHGEF40-204ENST00000555038 KRTAP10-10P60014 251 aa9.09□□□□□ -0.95
ARHGEF40-204ENST00000555038 KRTAP23-1A1A580 65 aa9.09□□□□□ -0.95
ARHGEF40-204ENST00000555038 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
ARHGEF40-204ENST00000555038 KRTAP19-8Q3LI54 63 aa8.97□□□□□ -0.97
ARHGEF40-204ENST00000555038 MT1BP07438 61 aa8.77□□□□□ -1.01
ARHGEF40-204ENST00000555038 KRTAP9-3Q9BYQ3 159 aa8.76□□□□□ -1.01
ARHGEF40-204ENST00000555038 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
ARHGEF40-204ENST00000555038 H3BS24 57 aa8.67□□□□□ -1.02
ARHGEF40-204ENST00000555038 KRTAP10-5P60370 271 aa8.63□□□□□ -1.03
ARHGEF40-204ENST00000555038 MT1XP80297 61 aa8.63□□□□□ -1.03
ARHGEF40-204ENST00000555038 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
ARHGEF40-204ENST00000555038 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
ARHGEF40-204ENST00000555038 KRTAP8-1Q8IUC2 63 aa8.48□□□□□ -1.05
ARHGEF40-204ENST00000555038 LUZP6Q538Z0 58 aa8.47□□□□□ -1.05
ARHGEF40-204ENST00000555038 SPRR5A0A1B0GTR4 108 aa8.44□□□□□ -1.06
ARHGEF40-204ENST00000555038 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
ARHGEF40-204ENST00000555038 LCE2BO14633 110 aa8.38□□□□□ -1.07
ARHGEF40-204ENST00000555038 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
ARHGEF40-204ENST00000555038 KRTAP10-7P60409 375 aaPredicted RBP8.3□□□□□ -1.08
ARHGEF40-204ENST00000555038 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
ARHGEF40-204ENST00000555038 KRTAP12-3P60328 96 aa8.23□□□□□ -1.09
ARHGEF40-204ENST00000555038 USH2AO75445 5202 aa8.12□□□□□ -1.11
ARHGEF40-204ENST00000555038 FSIP2Q5CZC0 6907 aa8.03□□□□□ -1.12
ARHGEF40-204ENST00000555038 KRTAP19-5Q3LI72 72 aa7.94□□□□□ -1.14
ARHGEF40-204ENST00000555038 SSPOA2VEC9 5147 aa7.93□□□□□ -1.14
ARHGEF40-204ENST00000555038 CRCT1Q9UGL9 99 aa7.91□□□□□ -1.14
ARHGEF40-204ENST00000555038 KRTAP9-6A0A140TA67 174 aa7.83□□□□□ -1.16
ARHGEF40-204ENST00000555038 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
ARHGEF40-204ENST00000555038 KRTAP4-8A0A0G2JLE6 195 aa7.79□□□□□ -1.16
ARHGEF40-204ENST00000555038 KRTAP4-8Q9BYQ9 185 aa7.79□□□□□ -1.16
ARHGEF40-204ENST00000555038 KRTAP19-6Q3LI70 58 aa7.76□□□□□ -1.17
ARHGEF40-204ENST00000555038 LCE3CQ5T5A8 94 aa7.74□□□□□ -1.17
ARHGEF40-204ENST00000555038 KRTAP19-4Q3LI73 84 aa7.72□□□□□ -1.17
ARHGEF40-204ENST00000555038 KMT2DO14686 5537 aa7.7□□□□□ -1.18
ARHGEF40-204ENST00000555038 KRTAP19-7Q3SYF9 63 aa7.69□□□□□ -1.18
ARHGEF40-204ENST00000555038 FCGBPQ9Y6R7 5405 aaPredicted RBP7.68□□□□□ -1.18
ARHGEF40-204ENST00000555038 MT1EP04732 61 aa7.53□□□□□ -1.2
ARHGEF40-204ENST00000555038 MT1LQ93083 61 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms