RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
MTHFD1-208ENST00000554739 H3BPC8 53 aa5.97□□□□□ -1.45
MTHFD1-208ENST00000554739 A8MUN3 132 aa5.95□□□□□ -1.46
MTHFD1-208ENST00000554739 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
MTHFD1-208ENST00000554739 FAM236AA0A1B0GUQ0 79 aa5.91□□□□□ -1.46
MTHFD1-208ENST00000554739 FAM236BA0A1B0GV22 79 aa5.91□□□□□ -1.46
MTHFD1-208ENST00000554739 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
MTHFD1-208ENST00000554739 TRAV7A0A075B6U4 112 aa5.89□□□□□ -1.47
MTHFD1-208ENST00000554739 NDUFC1O43677 76 aa5.89□□□□□ -1.47
MTHFD1-208ENST00000554739 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
MTHFD1-208ENST00000554739 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
MTHFD1-208ENST00000554739 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
MTHFD1-208ENST00000554739 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
MTHFD1-208ENST00000554739 H0YAA0 97 aa5.81□□□□□ -1.48
MTHFD1-208ENST00000554739 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
MTHFD1-208ENST00000554739 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
MTHFD1-208ENST00000554739 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-208ENST00000554739 MT1BP07438 61 aa5.75□□□□□ -1.49
MTHFD1-208ENST00000554739 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
MTHFD1-208ENST00000554739 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
MTHFD1-208ENST00000554739 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
MTHFD1-208ENST00000554739 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-208ENST00000554739 ACYP2P14621 99 aa5.72□□□□□ -1.49
MTHFD1-208ENST00000554739 Q5VV11 94 aa5.72□□□□□ -1.49
MTHFD1-208ENST00000554739 SYNE2Q8WXH0 6885 aaKnown RBP5.72□□□□□ -1.49
MTHFD1-208ENST00000554739 C20orf197Q8N268 126 aa5.71□□□□□ -1.5
MTHFD1-208ENST00000554739 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
MTHFD1-208ENST00000554739 P0C880 135 aa5.65□□□□□ -1.5
MTHFD1-208ENST00000554739 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
MTHFD1-208ENST00000554739 COX7CP15954 63 aa5.6□□□□□ -1.51
MTHFD1-208ENST00000554739 SPTSSBQ8NFR3 76 aa5.6□□□□□ -1.51
MTHFD1-208ENST00000554739 A6NN06 94 aa5.59□□□□□ -1.51
MTHFD1-208ENST00000554739 CHKB-CPT1BH3BT56 60 aa5.59□□□□□ -1.51
MTHFD1-208ENST00000554739 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
MTHFD1-208ENST00000554739 R4GN34 69 aa5.57□□□□□ -1.52
MTHFD1-208ENST00000554739 M0QZ58 72 aa5.54□□□□□ -1.52
MTHFD1-208ENST00000554739 CYSTM1Q9H1C7 97 aa5.52□□□□□ -1.53
MTHFD1-208ENST00000554739 H7BZZ5 65 aa5.5□□□□□ -1.53
MTHFD1-208ENST00000554739 COA5Q86WW8 74 aa5.48□□□□□ -1.53
MTHFD1-208ENST00000554739 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
MTHFD1-208ENST00000554739 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
MTHFD1-208ENST00000554739 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
MTHFD1-208ENST00000554739 KRTAP6-3Q3LI67 103 aa5.44□□□□□ -1.54
MTHFD1-208ENST00000554739 MT1XP80297 61 aa5.42□□□□□ -1.54
MTHFD1-208ENST00000554739 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
MTHFD1-208ENST00000554739 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
MTHFD1-208ENST00000554739 NEBP20929 6669 aa5.35□□□□□ -1.55
MTHFD1-208ENST00000554739 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
MTHFD1-208ENST00000554739 KMT2DO14686 5537 aa5.33□□□□□ -1.56
MTHFD1-208ENST00000554739 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
MTHFD1-208ENST00000554739 SEC61GP60059 68 aa5.31□□□□□ -1.56
MTHFD1-208ENST00000554739 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
MTHFD1-208ENST00000554739 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
MTHFD1-208ENST00000554739 KRTAP5-9P26371 169 aa5.25□□□□□ -1.57
MTHFD1-208ENST00000554739 A0A1B0GU33 70 aa5.24□□□□□ -1.57
MTHFD1-208ENST00000554739 ATP5EP56381 51 aaPredicted RBP5.24□□□□□ -1.57
MTHFD1-208ENST00000554739 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
MTHFD1-208ENST00000554739 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
MTHFD1-208ENST00000554739 A0A1B0GU69 56 aa5.19□□□□□ -1.58
MTHFD1-208ENST00000554739 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
MTHFD1-208ENST00000554739 A0A0D9SG42 100 aa5.17□□□□□ -1.58
MTHFD1-208ENST00000554739 TMEM258P61165 79 aa5.17□□□□□ -1.58
MTHFD1-208ENST00000554739 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
MTHFD1-208ENST00000554739 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
MTHFD1-208ENST00000554739 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
MTHFD1-208ENST00000554739 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
MTHFD1-208ENST00000554739 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
MTHFD1-208ENST00000554739 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
MTHFD1-208ENST00000554739 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
MTHFD1-208ENST00000554739 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
MTHFD1-208ENST00000554739 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
MTHFD1-208ENST00000554739 SPINT4Q6UDR6 99 aa5.09□□□□□ -1.59
MTHFD1-208ENST00000554739 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
MTHFD1-208ENST00000554739 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
MTHFD1-208ENST00000554739 PRR15LQ9BU68 103 aa5.07□□□□□ -1.6
MTHFD1-208ENST00000554739 A8MU10 97 aa5.05□□□□□ -1.6
MTHFD1-208ENST00000554739 H3BS24 57 aa5.03□□□□□ -1.6
MTHFD1-208ENST00000554739 SPRR2EP22531 72 aa4.99□□□□□ -1.61
MTHFD1-208ENST00000554739 SPRR2BP35325 72 aa4.99□□□□□ -1.61
MTHFD1-208ENST00000554739 SPRR2AP35326 72 aa4.99□□□□□ -1.61
MTHFD1-208ENST00000554739 LCE1AQ5T7P2 110 aa4.98□□□□□ -1.61
MTHFD1-208ENST00000554739 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
MTHFD1-208ENST00000554739 UQCR11O14957 56 aa4.92□□□□□ -1.62
MTHFD1-208ENST00000554739 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
MTHFD1-208ENST00000554739 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
MTHFD1-208ENST00000554739 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
MTHFD1-208ENST00000554739 Q1T7F1 81 aa4.86□□□□□ -1.63
MTHFD1-208ENST00000554739 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
MTHFD1-208ENST00000554739 V9GYY9 64 aa4.86□□□□□ -1.63
MTHFD1-208ENST00000554739 PCP4P48539 62 aa4.83□□□□□ -1.64
MTHFD1-208ENST00000554739 PSPHP1O15172 72 aa4.82□□□□□ -1.64
MTHFD1-208ENST00000554739 SPRR2DP22532 72 aa4.82□□□□□ -1.64
MTHFD1-208ENST00000554739 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
MTHFD1-208ENST00000554739 MT1EP04732 61 aa4.8□□□□□ -1.64
MTHFD1-208ENST00000554739 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
MTHFD1-208ENST00000554739 TNP1P09430 55 aa4.79□□□□□ -1.64
MTHFD1-208ENST00000554739 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
MTHFD1-208ENST00000554739 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
MTHFD1-208ENST00000554739 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
MTHFD1-208ENST00000554739 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms