RNA–Protein interactions for RNA: ENST00000554575.2

RAD51B-220, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-220ENST00000554575 RELNP78509 3460 aa0.29□□□□□ -2.36
RAD51B-220ENST00000554575 DMXL1Q9Y485 3027 aa0.29□□□□□ -2.36
RAD51B-220ENST00000554575 NBEAQ8NFP9 2946 aa0.28□□□□□ -2.36
RAD51B-220ENST00000554575 NCOR2Q9Y618 2525 aa0.28□□□□□ -2.36
RAD51B-220ENST00000554575 LRP2P98164 4655 aa0.28□□□□□ -2.36
RAD51B-220ENST00000554575 COL7A1Q02388 2944 aa0.28□□□□□ -2.36
RAD51B-220ENST00000554575 CACNA1AO00555 2505 aa0.28□□□□□ -2.36
RAD51B-220ENST00000554575 MYO18BQ8IUG5 2567 aa0.28□□□□□ -2.37
RAD51B-220ENST00000554575 ITPR3Q14573 2671 aa0.28□□□□□ -2.37
RAD51B-220ENST00000554575 TEX15Q9BXT5 2789 aa0.28□□□□□ -2.37
RAD51B-220ENST00000554575 ZANQ9Y493 2812 aa0.28□□□□□ -2.37
RAD51B-220ENST00000554575 SMG1Q96Q15 3661 aaKnown RBP0.27□□□□□ -2.37
RAD51B-220ENST00000554575 TEP1Q99973 2627 aaKnown RBP0.27□□□□□ -2.37
RAD51B-220ENST00000554575 ANKRD11Q6UB99 2663 aaPredicted RBP0.27□□□□□ -2.37
RAD51B-220ENST00000554575 H3BSH0 61 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 M0R2T5 61 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 PRM1P04553 51 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 DEFB135Q30KP9 77 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 KRTAP21-1Q3LI58 79 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 TMEM167AQ8TBQ9 72 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
RAD51B-220ENST00000554575 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
RAD51B-220ENST00000554575 FASNP49327 2511 aaKnown RBP0.27□□□□□ -2.37
RAD51B-220ENST00000554575 KALRNO60229 2985 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 FRYLO94915 3013 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 TRIOO75962 3097 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 HTTP42858 3142 aa0.27□□□□□ -2.37
RAD51B-220ENST00000554575 CELSR3Q9NYQ7 3312 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 TLN2Q9Y4G6 2542 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 DNAH12Q6ZR08 3092 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 MKI67P46013 3256 aaKnown RBP0.26□□□□□ -2.37
RAD51B-220ENST00000554575 CSMD1Q96PZ7 3565 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 C9orf92A6NGG3 77 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 SPINK1P00995 79 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 SPINK6Q6UWN8 80 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 TOMM7Q9P0U1 55 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 ACACBO00763 2458 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 PRUNE2Q8WUY3 3088 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 SZT2Q5T011 3432 aa0.26□□□□□ -2.37
RAD51B-220ENST00000554575 DMDP11532 3685 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 C5orf42Q9H799 3197 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 ITPR1Q14643 2758 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 HERC1Q15751 4861 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 KRTAP8-1Q8IUC2 63 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 VPS13CQ709C8 3753 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 LRBAP50851 2863 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
RAD51B-220ENST00000554575 IGSF10Q6WRI0 2623 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 MUC3AQ02505 3323 aa0.25□□□□□ -2.37
RAD51B-220ENST00000554575 COL6A3P12111 3177 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 LAMA3Q16787 3333 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 ADGRG4Q8IZF6 3080 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 H0YGG7 62 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 TNP1P09430 55 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 DEFB104AQ8WTQ1 72 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 U3KQA8 63 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 WDR87Q6ZQQ6 2873 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 FLNAP21333 2647 aaKnown RBP0.24□□□□□ -2.37
RAD51B-220ENST00000554575 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 SVEP1Q4LDE5 3571 aa0.24□□□□□ -2.37
RAD51B-220ENST00000554575 ITPR2Q14571 2701 aa0.23□□□□□ -2.37
RAD51B-220ENST00000554575 DOPEY1Q5JWR5 2465 aa0.23□□□□□ -2.37
RAD51B-220ENST00000554575 NIPBLQ6KC79 2804 aaeCLIP0.23□□□□□ -2.37
RAD51B-220ENST00000554575 SPRR2DP22532 72 aa0.23□□□□□ -2.37
RAD51B-220ENST00000554575 TGP01266 2768 aa0.23□□□□□ -2.37
RAD51B-220ENST00000554575 FREM2Q5SZK8 3169 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 NBEAL1Q6ZS30 2694 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 MGAM2Q2M2H8 2515 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 SPTAN1Q13813 2472 aaKnown RBP0.22□□□□□ -2.37
RAD51B-220ENST00000554575 MXRA5Q9NR99 2828 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 MT1AP04731 61 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 SPRR2BP35325 72 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 RPL39P5Q59GN2 51 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 STARD9Q9P2P6 4700 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 STAB2Q8WWQ8 2551 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 BOD1L1Q8NFC6 3051 aa0.22□□□□□ -2.37
RAD51B-220ENST00000554575 DNHD1Q96M86 4753 aa0.21□□□□□ -2.38
RAD51B-220ENST00000554575 MAP1AP78559 2803 aaPredicted RBP0.21□□□□□ -2.38
RAD51B-220ENST00000554575 CFAP46Q8IYW2 2715 aa0.21□□□□□ -2.38
RAD51B-220ENST00000554575 KRTAP19-5Q3LI72 72 aa0.21□□□□□ -2.38
RAD51B-220ENST00000554575 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
RAD51B-220ENST00000554575 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
RAD51B-220ENST00000554575 LAMA1P25391 3075 aa0.21□□□□□ -2.38
RAD51B-220ENST00000554575 RYR1P21817 5038 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 WDFY4Q6ZS81 3184 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 H3BNG1 76 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 H3BUX3 64 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 SMR3BP02814 79 aaPredicted RBP0.2□□□□□ -2.38
RAD51B-220ENST00000554575 SPRR2AP35326 72 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 KRTAP6-2Q3LI66 62 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 DCHS1Q96JQ0 3298 aa0.2□□□□□ -2.38
RAD51B-220ENST00000554575 LAMA2P24043 3122 aaKnown RBP0.2□□□□□ -2.38
RAD51B-220ENST00000554575 XIRP2A4UGR9 3374 aa0.19□□□□□ -2.38
RAD51B-220ENST00000554575 USH2AO75445 5202 aa0.19□□□□□ -2.38
RAD51B-220ENST00000554575 CEP350Q5VT06 3117 aa0.19□□□□□ -2.38
RAD51B-220ENST00000554575 HERC2O95714 4834 aa0.19□□□□□ -2.38
RAD51B-220ENST00000554575 BIRC6Q9NR09 4857 aa0.19□□□□□ -2.38
RAD51B-220ENST00000554575 CEP295Q9C0D2 2601 aa0.18□□□□□ -2.38
RAD51B-220ENST00000554575 CFAP47Q6ZTR5 3102 aa0.18□□□□□ -2.38
RAD51B-220ENST00000554575 TLN1Q9Y490 2541 aaKnown RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms