RNA–Protein interactions for RNA: ENST00000554575.2

RAD51B-220, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-220ENST00000554575 AEBP2Q6ZN18 517 aaPredicted RBP32.39■■■□□ 2.78
RAD51B-220ENST00000554575 CHIC1Q5VXU3 224 aa30.56■■■□□ 2.48
RAD51B-220ENST00000554575 SENP3Q9H4L4 574 aaPredicted RBP27.59■■■□□ 2.01
RAD51B-220ENST00000554575 PHF23Q9BUL5 403 aaPredicted RBP27.25■■□□□ 1.95
RAD51B-220ENST00000554575 FOXD1Q16676 465 aa25.78■■□□□ 1.72
RAD51B-220ENST00000554575 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
RAD51B-220ENST00000554575 MSH5O43196 834 aa24.13■■□□□ 1.45
RAD51B-220ENST00000554575 PIAS4Q8N2W9 510 aaPredicted RBP24.06■■□□□ 1.44
RAD51B-220ENST00000554575 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
RAD51B-220ENST00000554575 ADRA2BP18089 450 aa23.94■■□□□ 1.42
RAD51B-220ENST00000554575 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
RAD51B-220ENST00000554575 MAPK8IP2Q13387 824 aaPredicted RBP22.04■■□□□ 1.12
RAD51B-220ENST00000554575 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
RAD51B-220ENST00000554575 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
RAD51B-220ENST00000554575 PPP4R3CPQ6ZMV5 832 aa21.34■■□□□ 1.01
RAD51B-220ENST00000554575 DCAF8L1A6NGE4 600 aa21.06■□□□□ 0.96
RAD51B-220ENST00000554575 HOXD11P31277 338 aaPredicted RBP20.98■□□□□ 0.95
RAD51B-220ENST00000554575 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
RAD51B-220ENST00000554575 CACNB1Q02641 598 aaPredicted RBP20.85■□□□□ 0.93
RAD51B-220ENST00000554575 RNF216Q9NWF9 866 aaPredicted RBP20.79■□□□□ 0.92
RAD51B-220ENST00000554575 RNF39Q9H2S5 420 aa20.59■□□□□ 0.89
RAD51B-220ENST00000554575 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
RAD51B-220ENST00000554575 C1QBPQ07021 282 aaKnown RBP20.27■□□□□ 0.84
RAD51B-220ENST00000554575 DNAJC5BQ9UF47 199 aa20.22■□□□□ 0.83
RAD51B-220ENST00000554575 NPM3O75607 178 aaKnown RBP20.19■□□□□ 0.82
RAD51B-220ENST00000554575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAD51B-220ENST00000554575 KCNA4P22459 653 aa19.69■□□□□ 0.74
RAD51B-220ENST00000554575 U3KPZ7 1027 aaPredicted RBP19.6■□□□□ 0.73
RAD51B-220ENST00000554575 SPINK5Q9NQ38 1064 aaPredicted RBP19.4■□□□□ 0.7
RAD51B-220ENST00000554575 CAPN15O75808 1086 aa19.36■□□□□ 0.69
RAD51B-220ENST00000554575 SLC4A2P04920 1241 aa19.32■□□□□ 0.68
RAD51B-220ENST00000554575 DSG3P32926 999 aa19.26■□□□□ 0.67
RAD51B-220ENST00000554575 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
RAD51B-220ENST00000554575 APLP2Q06481 763 aa18.96■□□□□ 0.63
RAD51B-220ENST00000554575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
RAD51B-220ENST00000554575 ABCB7O75027 752 aa18.92■□□□□ 0.62
RAD51B-220ENST00000554575 HNRNPUL2Q1KMD3 747 aaKnown RBP18.92■□□□□ 0.62
RAD51B-220ENST00000554575 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
RAD51B-220ENST00000554575 SAMD1Q6SPF0 538 aaPredicted RBP18.82■□□□□ 0.6
RAD51B-220ENST00000554575 POTEHQ6S545 545 aa18.68■□□□□ 0.58
RAD51B-220ENST00000554575 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
RAD51B-220ENST00000554575 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
RAD51B-220ENST00000554575 POLA2Q14181 598 aa18.46■□□□□ 0.55
RAD51B-220ENST00000554575 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
RAD51B-220ENST00000554575 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
RAD51B-220ENST00000554575 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
RAD51B-220ENST00000554575 ZBTB22O15209 634 aa18.1■□□□□ 0.49
RAD51B-220ENST00000554575 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
RAD51B-220ENST00000554575 ZBTB12Q9Y330 459 aaPredicted RBP18■□□□□ 0.47
RAD51B-220ENST00000554575 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
RAD51B-220ENST00000554575 AKT1S1Q96B36 256 aa17.89■□□□□ 0.45
RAD51B-220ENST00000554575 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
RAD51B-220ENST00000554575 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
RAD51B-220ENST00000554575 PIP4P2Q8N4L2 257 aa17.59■□□□□ 0.41
RAD51B-220ENST00000554575 PITPNM1O00562 1244 aa17.58■□□□□ 0.4
RAD51B-220ENST00000554575 FBLN2P98095 1184 aa17.53■□□□□ 0.4
RAD51B-220ENST00000554575 SPDYE2BA6NHP3 402 aa17.45■□□□□ 0.38
RAD51B-220ENST00000554575 SPDYE6P0CI01 402 aa17.45■□□□□ 0.38
RAD51B-220ENST00000554575 SPDYE2Q495Y8 402 aa17.45■□□□□ 0.38
RAD51B-220ENST00000554575 FXR2P51116 673 aaKnown RBP eCLIP17.43■□□□□ 0.38
RAD51B-220ENST00000554575 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
RAD51B-220ENST00000554575 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
RAD51B-220ENST00000554575 HAX1O00165 279 aa17.33■□□□□ 0.36
RAD51B-220ENST00000554575 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
RAD51B-220ENST00000554575 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
RAD51B-220ENST00000554575 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
RAD51B-220ENST00000554575 SPDYE1Q8NFV5 336 aaPredicted RBP17.2■□□□□ 0.34
RAD51B-220ENST00000554575 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
RAD51B-220ENST00000554575 EVX2Q03828 476 aa17.12■□□□□ 0.33
RAD51B-220ENST00000554575 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
RAD51B-220ENST00000554575 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAD51B-220ENST00000554575 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
RAD51B-220ENST00000554575 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
RAD51B-220ENST00000554575 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
RAD51B-220ENST00000554575 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
RAD51B-220ENST00000554575 GABBR2O75899 941 aa16.69■□□□□ 0.26
RAD51B-220ENST00000554575 FARP1Q9Y4F1 1045 aaPredicted RBP16.62■□□□□ 0.25
RAD51B-220ENST00000554575 CD44P16070 742 aaKnown RBP16.57■□□□□ 0.24
RAD51B-220ENST00000554575 SPDYE4A6NLX3 237 aa16.51■□□□□ 0.23
RAD51B-220ENST00000554575 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
RAD51B-220ENST00000554575 STAG3Q9UJ98 1225 aa16.44■□□□□ 0.22
RAD51B-220ENST00000554575 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
RAD51B-220ENST00000554575 LHX8Q68G74 356 aa16.35■□□□□ 0.21
RAD51B-220ENST00000554575 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
RAD51B-220ENST00000554575 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
RAD51B-220ENST00000554575 CLCN6P51797 869 aa16.27■□□□□ 0.2
RAD51B-220ENST00000554575 DCBLD2Q96PD2 775 aa16.21■□□□□ 0.19
RAD51B-220ENST00000554575 GALR2O43603 387 aaPredicted RBP16.15■□□□□ 0.18
RAD51B-220ENST00000554575 MNX1P50219 401 aaPredicted RBP16.13■□□□□ 0.17
RAD51B-220ENST00000554575 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
RAD51B-220ENST00000554575 NPM1P06748 294 aaKnown RBP eCLIP16.1■□□□□ 0.17
RAD51B-220ENST00000554575 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
RAD51B-220ENST00000554575 PROM2Q8N271 834 aa16.03■□□□□ 0.16
RAD51B-220ENST00000554575 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
RAD51B-220ENST00000554575 MS4A3Q96HJ5 214 aa15.86■□□□□ 0.13
RAD51B-220ENST00000554575 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
RAD51B-220ENST00000554575 POTEB2H3BUK9 544 aa15.83■□□□□ 0.12
RAD51B-220ENST00000554575 MIER1Q8N108 512 aa15.79■□□□□ 0.12
RAD51B-220ENST00000554575 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
RAD51B-220ENST00000554575 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms