RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 HSPG2P98160 4391 aa2.6□□□□□ -1.99
PPP4R3A-204ENST00000554574 PKHD1L1Q86WI1 4243 aa2.6□□□□□ -1.99
PPP4R3A-204ENST00000554574 H0Y9P7 68 aa2.6□□□□□ -1.99
PPP4R3A-204ENST00000554574 LINC00313P59037 77 aa2.6□□□□□ -1.99
PPP4R3A-204ENST00000554574 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
PPP4R3A-204ENST00000554574 FAM236DA0A1B0GTK5 79 aa2.58□□□□□ -2
PPP4R3A-204ENST00000554574 FAM236CP0DP71 79 aa2.58□□□□□ -2
PPP4R3A-204ENST00000554574 LINC00208Q96KT6 92 aa2.58□□□□□ -2
PPP4R3A-204ENST00000554574 RPS28P62857 69 aaKnown RBP2.58□□□□□ -2
PPP4R3A-204ENST00000554574 LCE1EQ5T753 118 aa2.58□□□□□ -2
PPP4R3A-204ENST00000554574 C1orf64Q8NEQ6 169 aa2.58□□□□□ -2
PPP4R3A-204ENST00000554574 DMBT1Q9UGM3 2413 aaPredicted RBP2.57□□□□□ -2
PPP4R3A-204ENST00000554574 KRTAP10-8P60410 259 aa2.57□□□□□ -2
PPP4R3A-204ENST00000554574 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
PPP4R3A-204ENST00000554574 PRO0628Q9UI54 55 aa2.57□□□□□ -2
PPP4R3A-204ENST00000554574 KRTAP13-3Q3SY46 172 aa2.56□□□□□ -2
PPP4R3A-204ENST00000554574 SPANXA2-OT1Q8N9U9 137 aa2.55□□□□□ -2
PPP4R3A-204ENST00000554574 SERP1Q9Y6X1 66 aa2.55□□□□□ -2
PPP4R3A-204ENST00000554574 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
PPP4R3A-204ENST00000554574 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
PPP4R3A-204ENST00000554574 LUZP6Q538Z0 58 aa2.54□□□□□ -2
PPP4R3A-204ENST00000554574 RYR1P21817 5038 aa2.54□□□□□ -2
PPP4R3A-204ENST00000554574 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
PPP4R3A-204ENST00000554574 TNXBP22105 4242 aa2.54□□□□□ -2
PPP4R3A-204ENST00000554574 LRP1Q07954 4544 aaKnown RBP2.53□□□□□ -2
PPP4R3A-204ENST00000554574 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
PPP4R3A-204ENST00000554574 RBM12B-AS1Q9P1G2 102 aa2.52□□□□□ -2.01
PPP4R3A-204ENST00000554574 EPPK1P58107 5090 aaKnown RBP2.52□□□□□ -2.01
PPP4R3A-204ENST00000554574 MT1HL1P0DM35 61 aa2.52□□□□□ -2.01
PPP4R3A-204ENST00000554574 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
PPP4R3A-204ENST00000554574 A8MUU9 505 aa2.51□□□□□ -2.01
PPP4R3A-204ENST00000554574 PCOTHQ58A44 107 aa2.51□□□□□ -2.01
PPP4R3A-204ENST00000554574 C20orf166-AS1Q96NR2 134 aa2.51□□□□□ -2.01
PPP4R3A-204ENST00000554574 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
PPP4R3A-204ENST00000554574 C9orf92A6NGG3 77 aa2.5□□□□□ -2.01
PPP4R3A-204ENST00000554574 FAT3Q8TDW7 4589 aa2.49□□□□□ -2.01
PPP4R3A-204ENST00000554574 KRTAP12-2P59991 146 aa2.48□□□□□ -2.01
PPP4R3A-204ENST00000554574 HRES1P13985 223 aa2.47□□□□□ -2.01
PPP4R3A-204ENST00000554574 C7orf65Q6ZTY9 151 aa2.47□□□□□ -2.01
PPP4R3A-204ENST00000554574 COA5Q86WW8 74 aa2.46□□□□□ -2.02
PPP4R3A-204ENST00000554574 DMAC1Q96GE9 116 aa2.46□□□□□ -2.02
PPP4R3A-204ENST00000554574 ACYP2P14621 99 aa2.45□□□□□ -2.02
PPP4R3A-204ENST00000554574 RPL37P61927 97 aaKnown RBP2.44□□□□□ -2.02
PPP4R3A-204ENST00000554574 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
PPP4R3A-204ENST00000554574 Q1T7F1 81 aa2.44□□□□□ -2.02
PPP4R3A-204ENST00000554574 ATP11AUNQ6ZP68 121 aa2.44□□□□□ -2.02
PPP4R3A-204ENST00000554574 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
PPP4R3A-204ENST00000554574 SPINK7P58062 85 aa2.43□□□□□ -2.02
PPP4R3A-204ENST00000554574 A8MUN3 132 aa2.42□□□□□ -2.02
PPP4R3A-204ENST00000554574 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
PPP4R3A-204ENST00000554574 C4orf26Q17RF5 130 aa2.42□□□□□ -2.02
PPP4R3A-204ENST00000554574 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
PPP4R3A-204ENST00000554574 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.03
PPP4R3A-204ENST00000554574 CHKB-CPT1BH3BT56 60 aa2.4□□□□□ -2.03
PPP4R3A-204ENST00000554574 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
PPP4R3A-204ENST00000554574 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.03
PPP4R3A-204ENST00000554574 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
PPP4R3A-204ENST00000554574 COX6B2Q6YFQ2 88 aa2.38□□□□□ -2.03
PPP4R3A-204ENST00000554574 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
PPP4R3A-204ENST00000554574 HERC2O95714 4834 aa2.37□□□□□ -2.03
PPP4R3A-204ENST00000554574 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
PPP4R3A-204ENST00000554574 LRP2P98164 4655 aa2.36□□□□□ -2.03
PPP4R3A-204ENST00000554574 Q5VV11 94 aa2.36□□□□□ -2.03
PPP4R3A-204ENST00000554574 ADM2Q7Z4H4 148 aa2.36□□□□□ -2.03
PPP4R3A-204ENST00000554574 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
PPP4R3A-204ENST00000554574 SPINT4Q6UDR6 99 aa2.35□□□□□ -2.03
PPP4R3A-204ENST00000554574 SPTSSBQ8NFR3 76 aa2.35□□□□□ -2.03
PPP4R3A-204ENST00000554574 LPAP08519 4548 aa2.35□□□□□ -2.03
PPP4R3A-204ENST00000554574 K7ERS5 55 aa2.34□□□□□ -2.03
PPP4R3A-204ENST00000554574 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.04
PPP4R3A-204ENST00000554574 A0A1B0GU69 56 aa2.32□□□□□ -2.04
PPP4R3A-204ENST00000554574 BRK1Q8WUW1 75 aa2.32□□□□□ -2.04
PPP4R3A-204ENST00000554574 A6NED7 52 aa2.3□□□□□ -2.04
PPP4R3A-204ENST00000554574 H1FX-AS1Q4G0G2 97 aa2.3□□□□□ -2.04
PPP4R3A-204ENST00000554574 LCA10Q71F78 164 aa2.3□□□□□ -2.04
PPP4R3A-204ENST00000554574 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
PPP4R3A-204ENST00000554574 S4R3F8 94 aa2.3□□□□□ -2.04
PPP4R3A-204ENST00000554574 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
PPP4R3A-204ENST00000554574 CDC42SE1Q9NRR8 79 aa2.28□□□□□ -2.04
PPP4R3A-204ENST00000554574 R4GN34 69 aa2.28□□□□□ -2.04
PPP4R3A-204ENST00000554574 UQCR11O14957 56 aa2.27□□□□□ -2.05
PPP4R3A-204ENST00000554574 KRTAP4-1Q9BYQ7 146 aa2.27□□□□□ -2.05
PPP4R3A-204ENST00000554574 MUC17Q685J3 4493 aa2.27□□□□□ -2.05
PPP4R3A-204ENST00000554574 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
PPP4R3A-204ENST00000554574 HERC1Q15751 4861 aa2.26□□□□□ -2.05
PPP4R3A-204ENST00000554574 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
PPP4R3A-204ENST00000554574 CSAG1Q6PB30 78 aa2.25□□□□□ -2.05
PPP4R3A-204ENST00000554574 A0A1B0GU33 70 aa2.24□□□□□ -2.05
PPP4R3A-204ENST00000554574 MIR22HGQ0VDD5 57 aa2.24□□□□□ -2.05
PPP4R3A-204ENST00000554574 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
PPP4R3A-204ENST00000554574 HMCN2Q8NDA2 5059 aa2.23□□□□□ -2.05
PPP4R3A-204ENST00000554574 MUC2Q02817 5179 aa2.22□□□□□ -2.05
PPP4R3A-204ENST00000554574 H0YAA0 97 aa2.22□□□□□ -2.05
PPP4R3A-204ENST00000554574 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
PPP4R3A-204ENST00000554574 P0C880 135 aa2.2□□□□□ -2.06
PPP4R3A-204ENST00000554574 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
PPP4R3A-204ENST00000554574 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
PPP4R3A-204ENST00000554574 A6NN06 94 aa2.18□□□□□ -2.06
PPP4R3A-204ENST00000554574 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
PPP4R3A-204ENST00000554574 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms