RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 XP32Q5T750 250 aa6.37□□□□□ -1.39
LRP1-207ENST00000554174 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
LRP1-207ENST00000554174 RPL37P61927 97 aaKnown RBP6.37□□□□□ -1.39
LRP1-207ENST00000554174 COX6B2Q6YFQ2 88 aa6.37□□□□□ -1.39
LRP1-207ENST00000554174 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
LRP1-207ENST00000554174 SEC61GP60059 68 aa6.34□□□□□ -1.4
LRP1-207ENST00000554174 H0YAA0 97 aa6.27□□□□□ -1.41
LRP1-207ENST00000554174 LPAP08519 4548 aa6.26□□□□□ -1.41
LRP1-207ENST00000554174 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
LRP1-207ENST00000554174 A0A1B0GU33 70 aa6.23□□□□□ -1.41
LRP1-207ENST00000554174 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
LRP1-207ENST00000554174 LRP2P98164 4655 aa6.22□□□□□ -1.41
LRP1-207ENST00000554174 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.41
LRP1-207ENST00000554174 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
LRP1-207ENST00000554174 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
LRP1-207ENST00000554174 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
LRP1-207ENST00000554174 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
LRP1-207ENST00000554174 S4R3F8 94 aa6.16□□□□□ -1.42
LRP1-207ENST00000554174 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
LRP1-207ENST00000554174 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
LRP1-207ENST00000554174 P0C880 135 aa6.05□□□□□ -1.44
LRP1-207ENST00000554174 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
LRP1-207ENST00000554174 A0A0D9SG42 100 aa5.99□□□□□ -1.45
LRP1-207ENST00000554174 HERC2O95714 4834 aa5.96□□□□□ -1.45
LRP1-207ENST00000554174 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
LRP1-207ENST00000554174 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
LRP1-207ENST00000554174 K7ERS5 55 aa5.93□□□□□ -1.46
LRP1-207ENST00000554174 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
LRP1-207ENST00000554174 LINC01554Q52M75 96 aa5.86□□□□□ -1.47
LRP1-207ENST00000554174 CRIPTQ9P021 101 aa5.86□□□□□ -1.47
LRP1-207ENST00000554174 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
LRP1-207ENST00000554174 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
LRP1-207ENST00000554174 MUC2Q02817 5179 aa5.82□□□□□ -1.48
LRP1-207ENST00000554174 LCE2BO14633 110 aa5.82□□□□□ -1.48
LRP1-207ENST00000554174 BIRC6Q9NR09 4857 aa5.82□□□□□ -1.48
LRP1-207ENST00000554174 ROMO1P60602 79 aa5.82□□□□□ -1.48
LRP1-207ENST00000554174 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
LRP1-207ENST00000554174 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
LRP1-207ENST00000554174 M0QZ58 72 aa5.79□□□□□ -1.48
LRP1-207ENST00000554174 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
LRP1-207ENST00000554174 PCLOQ9Y6V0 5065 aa5.76□□□□□ -1.49
LRP1-207ENST00000554174 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
LRP1-207ENST00000554174 HERC1Q15751 4861 aa5.72□□□□□ -1.49
LRP1-207ENST00000554174 R4GN34 69 aa5.7□□□□□ -1.5
LRP1-207ENST00000554174 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
LRP1-207ENST00000554174 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
LRP1-207ENST00000554174 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
LRP1-207ENST00000554174 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
LRP1-207ENST00000554174 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
LRP1-207ENST00000554174 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
LRP1-207ENST00000554174 H3BS24 57 aa5.52□□□□□ -1.53
LRP1-207ENST00000554174 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
LRP1-207ENST00000554174 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
LRP1-207ENST00000554174 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
LRP1-207ENST00000554174 MT1HP80294 61 aa5.35□□□□□ -1.55
LRP1-207ENST00000554174 M0R2T5 61 aa5.32□□□□□ -1.56
LRP1-207ENST00000554174 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
LRP1-207ENST00000554174 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
LRP1-207ENST00000554174 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
LRP1-207ENST00000554174 MT1FP04733 61 aa5.25□□□□□ -1.57
LRP1-207ENST00000554174 MT2AP02795 61 aa5.23□□□□□ -1.57
LRP1-207ENST00000554174 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
LRP1-207ENST00000554174 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
LRP1-207ENST00000554174 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
LRP1-207ENST00000554174 TNP1P09430 55 aa5.16□□□□□ -1.58
LRP1-207ENST00000554174 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
LRP1-207ENST00000554174 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
LRP1-207ENST00000554174 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
LRP1-207ENST00000554174 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
LRP1-207ENST00000554174 MT1BP07438 61 aa5.03□□□□□ -1.6
LRP1-207ENST00000554174 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
LRP1-207ENST00000554174 KRTAP10-5P60370 271 aa4.97□□□□□ -1.61
LRP1-207ENST00000554174 MT1XP80297 61 aa4.97□□□□□ -1.61
LRP1-207ENST00000554174 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
LRP1-207ENST00000554174 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
LRP1-207ENST00000554174 USH2AO75445 5202 aa4.82□□□□□ -1.64
LRP1-207ENST00000554174 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
LRP1-207ENST00000554174 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
LRP1-207ENST00000554174 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
LRP1-207ENST00000554174 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
LRP1-207ENST00000554174 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
LRP1-207ENST00000554174 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
LRP1-207ENST00000554174 KMT2DO14686 5537 aa4.66□□□□□ -1.66
LRP1-207ENST00000554174 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
LRP1-207ENST00000554174 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
LRP1-207ENST00000554174 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
LRP1-207ENST00000554174 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
LRP1-207ENST00000554174 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
LRP1-207ENST00000554174 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
LRP1-207ENST00000554174 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
LRP1-207ENST00000554174 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
LRP1-207ENST00000554174 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
LRP1-207ENST00000554174 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
LRP1-207ENST00000554174 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
LRP1-207ENST00000554174 MT1EP04732 61 aa4.3□□□□□ -1.72
LRP1-207ENST00000554174 MT1LQ93083 61 aa4.27□□□□□ -1.73
LRP1-207ENST00000554174 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
LRP1-207ENST00000554174 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
LRP1-207ENST00000554174 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
LRP1-207ENST00000554174 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms