RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 LINC00304Q8N9R0 145 aa5.21□□□□□ -1.58
MARK3-207ENST00000553942 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
MARK3-207ENST00000553942 ROMO1P60602 79 aa5.2□□□□□ -1.58
MARK3-207ENST00000553942 LPAP08519 4548 aa5.2□□□□□ -1.58
MARK3-207ENST00000553942 SSBP3-AS1Q7Z2R9 100 aa5.2□□□□□ -1.58
MARK3-207ENST00000553942 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
MARK3-207ENST00000553942 Q96NJ1 140 aa5.19□□□□□ -1.58
MARK3-207ENST00000553942 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
MARK3-207ENST00000553942 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
MARK3-207ENST00000553942 KRTAP13-3Q3SY46 172 aa5.16□□□□□ -1.58
MARK3-207ENST00000553942 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
MARK3-207ENST00000553942 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
MARK3-207ENST00000553942 SPINK1P00995 79 aa5.12□□□□□ -1.59
MARK3-207ENST00000553942 LRP2P98164 4655 aa5.1□□□□□ -1.59
MARK3-207ENST00000553942 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
MARK3-207ENST00000553942 Q5W150 140 aa5.08□□□□□ -1.6
MARK3-207ENST00000553942 A8MUU9 505 aa5.06□□□□□ -1.6
MARK3-207ENST00000553942 MUC2Q02817 5179 aa5.02□□□□□ -1.61
MARK3-207ENST00000553942 P0C880 135 aa5.02□□□□□ -1.61
MARK3-207ENST00000553942 IGKV2-30P06310 120 aa5□□□□□ -1.61
MARK3-207ENST00000553942 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
MARK3-207ENST00000553942 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
MARK3-207ENST00000553942 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
MARK3-207ENST00000553942 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
MARK3-207ENST00000553942 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
MARK3-207ENST00000553942 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
MARK3-207ENST00000553942 H0YAA0 97 aa4.93□□□□□ -1.62
MARK3-207ENST00000553942 XP32Q5T750 250 aa4.93□□□□□ -1.62
MARK3-207ENST00000553942 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
MARK3-207ENST00000553942 K7ERS5 55 aa4.86□□□□□ -1.63
MARK3-207ENST00000553942 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
MARK3-207ENST00000553942 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
MARK3-207ENST00000553942 A0A1B0GU33 70 aa4.84□□□□□ -1.63
MARK3-207ENST00000553942 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
MARK3-207ENST00000553942 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
MARK3-207ENST00000553942 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
MARK3-207ENST00000553942 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
MARK3-207ENST00000553942 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
MARK3-207ENST00000553942 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
MARK3-207ENST00000553942 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
MARK3-207ENST00000553942 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
MARK3-207ENST00000553942 MUC17Q685J3 4493 aa4.76□□□□□ -1.65
MARK3-207ENST00000553942 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.65
MARK3-207ENST00000553942 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.65
MARK3-207ENST00000553942 SEC61BP60468 96 aaKnown RBP4.67□□□□□ -1.66
MARK3-207ENST00000553942 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
MARK3-207ENST00000553942 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
MARK3-207ENST00000553942 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
MARK3-207ENST00000553942 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
MARK3-207ENST00000553942 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
MARK3-207ENST00000553942 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
MARK3-207ENST00000553942 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
MARK3-207ENST00000553942 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
MARK3-207ENST00000553942 S4R3F8 94 aa4.47□□□□□ -1.69
MARK3-207ENST00000553942 A0A0D9SG42 100 aa4.46□□□□□ -1.7
MARK3-207ENST00000553942 MT1HP80294 61 aa4.43□□□□□ -1.7
MARK3-207ENST00000553942 M0R2T5 61 aa4.4□□□□□ -1.71
MARK3-207ENST00000553942 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
MARK3-207ENST00000553942 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
MARK3-207ENST00000553942 PLAC4Q8WY50 150 aa4.34□□□□□ -1.71
MARK3-207ENST00000553942 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
MARK3-207ENST00000553942 M0QZ58 72 aa4.26□□□□□ -1.73
MARK3-207ENST00000553942 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
MARK3-207ENST00000553942 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
MARK3-207ENST00000553942 MT1FP04733 61 aa4.23□□□□□ -1.73
MARK3-207ENST00000553942 MT2AP02795 61 aa4.23□□□□□ -1.73
MARK3-207ENST00000553942 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
MARK3-207ENST00000553942 USH2AO75445 5202 aa4.21□□□□□ -1.74
MARK3-207ENST00000553942 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
MARK3-207ENST00000553942 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
MARK3-207ENST00000553942 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
MARK3-207ENST00000553942 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
MARK3-207ENST00000553942 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.75
MARK3-207ENST00000553942 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
MARK3-207ENST00000553942 R4GN34 69 aa4.08□□□□□ -1.76
MARK3-207ENST00000553942 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
MARK3-207ENST00000553942 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
MARK3-207ENST00000553942 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
MARK3-207ENST00000553942 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
MARK3-207ENST00000553942 LCE4AQ5TA78 99 aa4□□□□□ -1.77
MARK3-207ENST00000553942 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
MARK3-207ENST00000553942 INE1O15225 51 aa3.97□□□□□ -1.77
MARK3-207ENST00000553942 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
MARK3-207ENST00000553942 SSPOA2VEC9 5147 aa3.97□□□□□ -1.77
MARK3-207ENST00000553942 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
MARK3-207ENST00000553942 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
MARK3-207ENST00000553942 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
MARK3-207ENST00000553942 MT1BP07438 61 aa3.95□□□□□ -1.78
MARK3-207ENST00000553942 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
MARK3-207ENST00000553942 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
MARK3-207ENST00000553942 KMT2DO14686 5537 aa3.85□□□□□ -1.79
MARK3-207ENST00000553942 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
MARK3-207ENST00000553942 MT1XP80297 61 aa3.79□□□□□ -1.8
MARK3-207ENST00000553942 TNP1P09430 55 aa3.78□□□□□ -1.8
MARK3-207ENST00000553942 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
MARK3-207ENST00000553942 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
MARK3-207ENST00000553942 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
MARK3-207ENST00000553942 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
MARK3-207ENST00000553942 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
MARK3-207ENST00000553942 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms