RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 APOBP04114 4563 aaKnown RBP6.68□□□□□ -1.34
SPTB-206ENST00000553938 PKHD1L1Q86WI1 4243 aa6.67□□□□□ -1.34
SPTB-206ENST00000553938 TYMSOSQ8TAI1 123 aa6.65□□□□□ -1.34
SPTB-206ENST00000553938 HSPG2P98160 4391 aa6.64□□□□□ -1.35
SPTB-206ENST00000553938 RYR2Q92736 4967 aa6.56□□□□□ -1.36
SPTB-206ENST00000553938 LPAP08519 4548 aa6.56□□□□□ -1.36
SPTB-206ENST00000553938 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
SPTB-206ENST00000553938 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
SPTB-206ENST00000553938 FAT3Q8TDW7 4589 aa6.51□□□□□ -1.37
SPTB-206ENST00000553938 A0A1B0GU33 70 aa6.51□□□□□ -1.37
SPTB-206ENST00000553938 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
SPTB-206ENST00000553938 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
SPTB-206ENST00000553938 TNXBP22105 4242 aa6.47□□□□□ -1.37
SPTB-206ENST00000553938 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
SPTB-206ENST00000553938 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SPTB-206ENST00000553938 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
SPTB-206ENST00000553938 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
SPTB-206ENST00000553938 RYR1P21817 5038 aa6.36□□□□□ -1.39
SPTB-206ENST00000553938 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
SPTB-206ENST00000553938 LRP2P98164 4655 aa6.36□□□□□ -1.39
SPTB-206ENST00000553938 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
SPTB-206ENST00000553938 A0A0D9SG42 100 aa6.34□□□□□ -1.4
SPTB-206ENST00000553938 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
SPTB-206ENST00000553938 A0A1B0GVY2 172 aa6.31□□□□□ -1.4
SPTB-206ENST00000553938 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
SPTB-206ENST00000553938 COX6B2Q6YFQ2 88 aa6.29□□□□□ -1.4
SPTB-206ENST00000553938 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
SPTB-206ENST00000553938 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
SPTB-206ENST00000553938 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
SPTB-206ENST00000553938 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
SPTB-206ENST00000553938 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
SPTB-206ENST00000553938 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
SPTB-206ENST00000553938 KRTAP3-2Q9BYR7 98 aa6.14□□□□□ -1.43
SPTB-206ENST00000553938 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
SPTB-206ENST00000553938 XP32Q5T750 250 aa6.12□□□□□ -1.43
SPTB-206ENST00000553938 MUC2Q02817 5179 aa6.11□□□□□ -1.43
SPTB-206ENST00000553938 Q5VSD8 79 aa6.1□□□□□ -1.43
SPTB-206ENST00000553938 PCLOQ9Y6V0 5065 aa6.1□□□□□ -1.43
SPTB-206ENST00000553938 KRTAP12-2P59991 146 aa6.02□□□□□ -1.44
SPTB-206ENST00000553938 S4R3F8 94 aa6.02□□□□□ -1.45
SPTB-206ENST00000553938 HERC2O95714 4834 aa5.99□□□□□ -1.45
SPTB-206ENST00000553938 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
SPTB-206ENST00000553938 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
SPTB-206ENST00000553938 R4GN34 69 aa5.96□□□□□ -1.45
SPTB-206ENST00000553938 HERC1Q15751 4861 aa5.92□□□□□ -1.46
SPTB-206ENST00000553938 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
SPTB-206ENST00000553938 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
SPTB-206ENST00000553938 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
SPTB-206ENST00000553938 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
SPTB-206ENST00000553938 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
SPTB-206ENST00000553938 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
SPTB-206ENST00000553938 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
SPTB-206ENST00000553938 M0QZ58 72 aa5.72□□□□□ -1.49
SPTB-206ENST00000553938 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
SPTB-206ENST00000553938 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
SPTB-206ENST00000553938 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
SPTB-206ENST00000553938 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
SPTB-206ENST00000553938 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
SPTB-206ENST00000553938 FLGP20930 4061 aaPredicted RBP5.54□□□□□ -1.52
SPTB-206ENST00000553938 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
SPTB-206ENST00000553938 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
SPTB-206ENST00000553938 LCE2BO14633 110 aa5.45□□□□□ -1.54
SPTB-206ENST00000553938 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
SPTB-206ENST00000553938 INE1O15225 51 aa5.18□□□□□ -1.58
SPTB-206ENST00000553938 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
SPTB-206ENST00000553938 USH2AO75445 5202 aa5.12□□□□□ -1.59
SPTB-206ENST00000553938 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
SPTB-206ENST00000553938 TNP1P09430 55 aa5.09□□□□□ -1.59
SPTB-206ENST00000553938 KMT2DO14686 5537 aa5.07□□□□□ -1.6
SPTB-206ENST00000553938 M0R2T5 61 aa5.05□□□□□ -1.6
SPTB-206ENST00000553938 MT1FP04733 61 aa5.02□□□□□ -1.61
SPTB-206ENST00000553938 LCE3AQ5TA76 89 aa5□□□□□ -1.61
SPTB-206ENST00000553938 MT1HP80294 61 aa5□□□□□ -1.61
SPTB-206ENST00000553938 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.61
SPTB-206ENST00000553938 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
SPTB-206ENST00000553938 MT2AP02795 61 aa4.95□□□□□ -1.62
SPTB-206ENST00000553938 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
SPTB-206ENST00000553938 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
SPTB-206ENST00000553938 MT1BP07438 61 aa4.82□□□□□ -1.64
SPTB-206ENST00000553938 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
SPTB-206ENST00000553938 MT1XP80297 61 aa4.81□□□□□ -1.64
SPTB-206ENST00000553938 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
SPTB-206ENST00000553938 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
SPTB-206ENST00000553938 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
SPTB-206ENST00000553938 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
SPTB-206ENST00000553938 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
SPTB-206ENST00000553938 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
SPTB-206ENST00000553938 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
SPTB-206ENST00000553938 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
SPTB-206ENST00000553938 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
SPTB-206ENST00000553938 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
SPTB-206ENST00000553938 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
SPTB-206ENST00000553938 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
SPTB-206ENST00000553938 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
SPTB-206ENST00000553938 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
SPTB-206ENST00000553938 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
SPTB-206ENST00000553938 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
SPTB-206ENST00000553938 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.72
SPTB-206ENST00000553938 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
SPTB-206ENST00000553938 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 465.1 ms