RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MP68P56378 58 aa9.3□□□□□ -0.92
FOXA1-203ENST00000553751 KLKP1Q107X0 134 aa9.3□□□□□ -0.92
FOXA1-203ENST00000553751 A8MUN3 132 aa9.23□□□□□ -0.93
FOXA1-203ENST00000553751 SCGB1A1P11684 91 aa9.2□□□□□ -0.94
FOXA1-203ENST00000553751 H3BPC8 53 aa9.19□□□□□ -0.94
FOXA1-203ENST00000553751 SPRR2GQ9BYE4 73 aa9.19□□□□□ -0.94
FOXA1-203ENST00000553751 K7ERU9 68 aa9.17□□□□□ -0.94
FOXA1-203ENST00000553751 NDUFC1O43677 76 aa9.17□□□□□ -0.94
FOXA1-203ENST00000553751 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
FOXA1-203ENST00000553751 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
FOXA1-203ENST00000553751 KRTAP9-7A8MTY7 169 aa9.13□□□□□ -0.95
FOXA1-203ENST00000553751 KRTAP19-8Q3LI54 63 aa9.11□□□□□ -0.95
FOXA1-203ENST00000553751 MT1BP07438 61 aa9.1□□□□□ -0.95
FOXA1-203ENST00000553751 MACF1Q9UPN3 7388 aaKnown RBP9.1□□□□□ -0.95
FOXA1-203ENST00000553751 H0YAA0 97 aa9.09□□□□□ -0.95
FOXA1-203ENST00000553751 Q5VV11 94 aa9.07□□□□□ -0.96
FOXA1-203ENST00000553751 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
FOXA1-203ENST00000553751 DMAC1Q96GE9 116 aa9.05□□□□□ -0.96
FOXA1-203ENST00000553751 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
FOXA1-203ENST00000553751 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
FOXA1-203ENST00000553751 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
FOXA1-203ENST00000553751 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
FOXA1-203ENST00000553751 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
FOXA1-203ENST00000553751 A6NN06 94 aa8.91□□□□□ -0.98
FOXA1-203ENST00000553751 KRTAP10-5P60370 271 aa8.85□□□□□ -0.99
FOXA1-203ENST00000553751 P0C880 135 aa8.82□□□□□ -1
FOXA1-203ENST00000553751 ACYP2P14621 99 aa8.81□□□□□ -1
FOXA1-203ENST00000553751 SNURFQ9Y675 71 aa8.81□□□□□ -1
FOXA1-203ENST00000553751 C20orf197Q8N268 126 aa8.77□□□□□ -1.01
FOXA1-203ENST00000553751 KRTAP6-3Q3LI67 103 aa8.74□□□□□ -1.01
FOXA1-203ENST00000553751 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
FOXA1-203ENST00000553751 R4GN34 69 aa8.74□□□□□ -1.01
FOXA1-203ENST00000553751 M0QZ58 72 aa8.68□□□□□ -1.02
FOXA1-203ENST00000553751 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
FOXA1-203ENST00000553751 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
FOXA1-203ENST00000553751 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
FOXA1-203ENST00000553751 PLAC4Q8WY50 150 aa8.6□□□□□ -1.03
FOXA1-203ENST00000553751 MT1XP80297 61 aa8.58□□□□□ -1.04
FOXA1-203ENST00000553751 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
FOXA1-203ENST00000553751 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
FOXA1-203ENST00000553751 COX7CP15954 63 aa8.51□□□□□ -1.05
FOXA1-203ENST00000553751 NEBP20929 6669 aa8.48□□□□□ -1.05
FOXA1-203ENST00000553751 MUC12Q9UKN1 5478 aa8.47□□□□□ -1.05
FOXA1-203ENST00000553751 KRTAP5-9P26371 169 aa8.43□□□□□ -1.06
FOXA1-203ENST00000553751 COA5Q86WW8 74 aa8.42□□□□□ -1.06
FOXA1-203ENST00000553751 KMT2DO14686 5537 aa8.4□□□□□ -1.06
FOXA1-203ENST00000553751 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.06
FOXA1-203ENST00000553751 H7BZZ5 65 aa8.37□□□□□ -1.07
FOXA1-203ENST00000553751 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
FOXA1-203ENST00000553751 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
FOXA1-203ENST00000553751 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
FOXA1-203ENST00000553751 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
FOXA1-203ENST00000553751 KRTAP8-1Q8IUC2 63 aa8.19□□□□□ -1.1
FOXA1-203ENST00000553751 SEC61GP60059 68 aa8.18□□□□□ -1.1
FOXA1-203ENST00000553751 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
FOXA1-203ENST00000553751 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
FOXA1-203ENST00000553751 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
FOXA1-203ENST00000553751 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
FOXA1-203ENST00000553751 KRTAP10-12P60413 245 aa8.14□□□□□ -1.11
FOXA1-203ENST00000553751 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
FOXA1-203ENST00000553751 CCDC179H3BU77 68 aa8.12□□□□□ -1.11
FOXA1-203ENST00000553751 A0A1B0GU33 70 aa8.06□□□□□ -1.12
FOXA1-203ENST00000553751 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
FOXA1-203ENST00000553751 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
FOXA1-203ENST00000553751 A0A0D9SG42 100 aa8.03□□□□□ -1.12
FOXA1-203ENST00000553751 SPRR2EP22531 72 aa8.02□□□□□ -1.13
FOXA1-203ENST00000553751 SPRR2BP35325 72 aa8.02□□□□□ -1.13
FOXA1-203ENST00000553751 SPRR2AP35326 72 aa8.02□□□□□ -1.13
FOXA1-203ENST00000553751 KRTAP20-1Q3LI63 56 aa8.01□□□□□ -1.13
FOXA1-203ENST00000553751 A0A1B0GU69 56 aa7.97□□□□□ -1.13
FOXA1-203ENST00000553751 ATP5EP56381 51 aaPredicted RBP7.97□□□□□ -1.13
FOXA1-203ENST00000553751 LCE1AQ5T7P2 110 aa7.96□□□□□ -1.14
FOXA1-203ENST00000553751 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
FOXA1-203ENST00000553751 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
FOXA1-203ENST00000553751 KRTAP2-3P0C7H8 128 aa7.83□□□□□ -1.16
FOXA1-203ENST00000553751 KRTAP2-4Q9BYR9 128 aa7.83□□□□□ -1.16
FOXA1-203ENST00000553751 SMIM26A0A096LP01 95 aa7.82□□□□□ -1.16
FOXA1-203ENST00000553751 TMEM258P61165 79 aa7.82□□□□□ -1.16
FOXA1-203ENST00000553751 A8MU10 97 aa7.79□□□□□ -1.16
FOXA1-203ENST00000553751 PRR15LQ9BU68 103 aa7.76□□□□□ -1.17
FOXA1-203ENST00000553751 SPRR2DP22532 72 aa7.75□□□□□ -1.17
FOXA1-203ENST00000553751 LINC01558Q9Y6Z2 57 aa7.75□□□□□ -1.17
FOXA1-203ENST00000553751 KRTAP19-7Q3SYF9 63 aa7.67□□□□□ -1.18
FOXA1-203ENST00000553751 KRTAP2-2Q9BYT5 123 aa7.6□□□□□ -1.19
FOXA1-203ENST00000553751 KRTAP2-1Q9BYU5 128 aa7.6□□□□□ -1.19
FOXA1-203ENST00000553751 MT1EP04732 61 aa7.59□□□□□ -1.19
FOXA1-203ENST00000553751 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
FOXA1-203ENST00000553751 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
FOXA1-203ENST00000553751 UQCR11O14957 56 aa7.52□□□□□ -1.21
FOXA1-203ENST00000553751 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
FOXA1-203ENST00000553751 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
FOXA1-203ENST00000553751 KRTAP19-3Q7Z4W3 81 aa7.49□□□□□ -1.21
FOXA1-203ENST00000553751 TNP1P09430 55 aa7.45□□□□□ -1.22
FOXA1-203ENST00000553751 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
FOXA1-203ENST00000553751 MIR22HGQ0VDD5 57 aa7.36□□□□□ -1.23
FOXA1-203ENST00000553751 V9GYY9 64 aa7.34□□□□□ -1.23
FOXA1-203ENST00000553751 Q1T7F1 81 aa7.32□□□□□ -1.24
FOXA1-203ENST00000553751 PSPHP1O15172 72 aa7.31□□□□□ -1.24
FOXA1-203ENST00000553751 MT1GP13640 62 aa7.3□□□□□ -1.24
FOXA1-203ENST00000553751 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms