RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 A6NN06 94 aa3.34□□□□□ -1.87
ATXN3-219ENST00000553488 C8orf87E5RJ46 101 aa3.34□□□□□ -1.87
ATXN3-219ENST00000553488 MT1BP07438 61 aa3.34□□□□□ -1.87
ATXN3-219ENST00000553488 IMUPQ9GZP8 106 aa3.33□□□□□ -1.88
ATXN3-219ENST00000553488 H0YGX0 51 aa3.32□□□□□ -1.88
ATXN3-219ENST00000553488 A0A1B0GX51 115 aa3.31□□□□□ -1.88
ATXN3-219ENST00000553488 CCDC179H3BU77 68 aa3.3□□□□□ -1.88
ATXN3-219ENST00000553488 TRACP01848 142 aa3.3□□□□□ -1.88
ATXN3-219ENST00000553488 LINC00643Q86TS7 51 aa3.3□□□□□ -1.88
ATXN3-219ENST00000553488 CCKP06307 115 aa3.29□□□□□ -1.88
ATXN3-219ENST00000553488 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
ATXN3-219ENST00000553488 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
ATXN3-219ENST00000553488 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
ATXN3-219ENST00000553488 H1FX-AS1Q4G0G2 97 aa3.28□□□□□ -1.88
ATXN3-219ENST00000553488 UQCRQO14949 82 aa3.27□□□□□ -1.89
ATXN3-219ENST00000553488 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
ATXN3-219ENST00000553488 SMIM26A0A096LP01 95 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 ATOX1O00244 68 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 PSPHP1O15172 72 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 BAALC-AS2P0C853 105 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 Q5VV11 94 aa3.26□□□□□ -1.89
ATXN3-219ENST00000553488 DNAL4O96015 105 aa3.25□□□□□ -1.89
ATXN3-219ENST00000553488 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
ATXN3-219ENST00000553488 ORMDL1Q9P0S3 153 aa3.25□□□□□ -1.89
ATXN3-219ENST00000553488 IGKV3D-7A0A0C4DH55 119 aa3.24□□□□□ -1.89
ATXN3-219ENST00000553488 J3KT08 172 aa3.24□□□□□ -1.89
ATXN3-219ENST00000553488 COX7CP15954 63 aa3.24□□□□□ -1.89
ATXN3-219ENST00000553488 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
ATXN3-219ENST00000553488 NDUFS5O43920 106 aa3.23□□□□□ -1.89
ATXN3-219ENST00000553488 HIST1H4AP62805 103 aaKnown RBP3.23□□□□□ -1.89
ATXN3-219ENST00000553488 H3BQ85 93 aa3.22□□□□□ -1.89
ATXN3-219ENST00000553488 TMEM256-PLSCR3K7ERE1 68 aa3.22□□□□□ -1.89
ATXN3-219ENST00000553488 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
ATXN3-219ENST00000553488 ATP5EP2Q5VTU8 51 aa3.22□□□□□ -1.89
ATXN3-219ENST00000553488 DSCR8Q96T75 97 aa3.22□□□□□ -1.89
ATXN3-219ENST00000553488 TMEM258P61165 79 aa3.21□□□□□ -1.9
ATXN3-219ENST00000553488 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
ATXN3-219ENST00000553488 SERP2Q8N6R1 65 aa3.21□□□□□ -1.9
ATXN3-219ENST00000553488 JMJD7-PLA2G4BH0Y9G9 81 aa3.2□□□□□ -1.9
ATXN3-219ENST00000553488 Q6ZQT0 140 aa3.2□□□□□ -1.9
ATXN3-219ENST00000553488 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
ATXN3-219ENST00000553488 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
ATXN3-219ENST00000553488 NDUFB1O75438 58 aa3.19□□□□□ -1.9
ATXN3-219ENST00000553488 SPRR2EP22531 72 aa3.19□□□□□ -1.9
ATXN3-219ENST00000553488 SPRR2BP35325 72 aa3.19□□□□□ -1.9
ATXN3-219ENST00000553488 SPRR2AP35326 72 aa3.19□□□□□ -1.9
ATXN3-219ENST00000553488 C14orf132Q9NPU4 83 aa3.19□□□□□ -1.9
ATXN3-219ENST00000553488 MMP24-AS1A0A0U1RRL7 71 aa3.18□□□□□ -1.9
ATXN3-219ENST00000553488 RBM3P98179 157 aaKnown RBP3.18□□□□□ -1.9
ATXN3-219ENST00000553488 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
ATXN3-219ENST00000553488 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
ATXN3-219ENST00000553488 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
ATXN3-219ENST00000553488 C7orf65Q6ZTY9 151 aa3.16□□□□□ -1.9
ATXN3-219ENST00000553488 PRR15Q8IV56 129 aa3.16□□□□□ -1.9
ATXN3-219ENST00000553488 MRPL34Q9BQ48 92 aaKnown RBP3.16□□□□□ -1.9
ATXN3-219ENST00000553488 UBL5Q9BZL1 73 aa3.16□□□□□ -1.9
ATXN3-219ENST00000553488 PDE6GP18545 87 aa3.15□□□□□ -1.91
ATXN3-219ENST00000553488 Q5W150 140 aa3.14□□□□□ -1.91
ATXN3-219ENST00000553488 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
ATXN3-219ENST00000553488 A0A087WVE0 104 aa3.13□□□□□ -1.91
ATXN3-219ENST00000553488 LOC110117498A0A087WWA1 95 aa3.13□□□□□ -1.91
ATXN3-219ENST00000553488 KLKP1Q107X0 134 aa3.13□□□□□ -1.91
ATXN3-219ENST00000553488 A8MU10 97 aa3.12□□□□□ -1.91
ATXN3-219ENST00000553488 ATP5EP56381 51 aaPredicted RBP3.12□□□□□ -1.91
ATXN3-219ENST00000553488 A0A1B0GW54 56 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 NDUFC1O43677 76 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 LCA10Q71F78 164 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 S4R3F8 94 aa3.11□□□□□ -1.91
ATXN3-219ENST00000553488 K7EQZ3 153 aa3.1□□□□□ -1.91
ATXN3-219ENST00000553488 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
ATXN3-219ENST00000553488 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
ATXN3-219ENST00000553488 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
ATXN3-219ENST00000553488 SPRR2DP22532 72 aa3.09□□□□□ -1.91
ATXN3-219ENST00000553488 BPY2O14599 106 aa3.08□□□□□ -1.92
ATXN3-219ENST00000553488 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
ATXN3-219ENST00000553488 H7BZZ5 65 aa3.07□□□□□ -1.92
ATXN3-219ENST00000553488 MT1XP80297 61 aa3.07□□□□□ -1.92
ATXN3-219ENST00000553488 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
ATXN3-219ENST00000553488 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
ATXN3-219ENST00000553488 MP68P56378 58 aa3.05□□□□□ -1.92
ATXN3-219ENST00000553488 NREPQ16612 68 aa3.05□□□□□ -1.92
ATXN3-219ENST00000553488 HCG22E2RYF7 251 aa3.03□□□□□ -1.92
ATXN3-219ENST00000553488 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
ATXN3-219ENST00000553488 C1orf64Q8NEQ6 169 aa3.03□□□□□ -1.92
ATXN3-219ENST00000553488 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
ATXN3-219ENST00000553488 SNURFQ9Y675 71 aa3.02□□□□□ -1.93
ATXN3-219ENST00000553488 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
ATXN3-219ENST00000553488 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
ATXN3-219ENST00000553488 Q8N9L7 120 aa3□□□□□ -1.93
ATXN3-219ENST00000553488 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
ATXN3-219ENST00000553488 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
ATXN3-219ENST00000553488 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
ATXN3-219ENST00000553488 H0YAA0 97 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms