RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 A8MUN3 132 aa8.56□□□□□ -1.04
CPSF2-202ENST00000553427 SCGB1A1P11684 91 aa8.56□□□□□ -1.04
CPSF2-202ENST00000553427 KLKP1Q107X0 134 aa8.55□□□□□ -1.04
CPSF2-202ENST00000553427 MT-ATP8P03928 68 aa8.54□□□□□ -1.04
CPSF2-202ENST00000553427 FAM236AA0A1B0GUQ0 79 aa8.47□□□□□ -1.05
CPSF2-202ENST00000553427 FAM236BA0A1B0GV22 79 aa8.47□□□□□ -1.05
CPSF2-202ENST00000553427 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
CPSF2-202ENST00000553427 FCGBPQ9Y6R7 5405 aaPredicted RBP8.46□□□□□ -1.06
CPSF2-202ENST00000553427 NDUFC1O43677 76 aa8.43□□□□□ -1.06
CPSF2-202ENST00000553427 KRTAP19-1Q8IUB9 90 aa8.43□□□□□ -1.06
CPSF2-202ENST00000553427 TRAV7A0A075B6U4 112 aa8.42□□□□□ -1.06
CPSF2-202ENST00000553427 H0YAA0 97 aa8.37□□□□□ -1.07
CPSF2-202ENST00000553427 KRTAP19-6Q3LI70 58 aa8.37□□□□□ -1.07
CPSF2-202ENST00000553427 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
CPSF2-202ENST00000553427 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
CPSF2-202ENST00000553427 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
CPSF2-202ENST00000553427 KRTAP19-8Q3LI54 63 aa8.28□□□□□ -1.08
CPSF2-202ENST00000553427 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
CPSF2-202ENST00000553427 MT1BP07438 61 aa8.22□□□□□ -1.09
CPSF2-202ENST00000553427 Q5VV11 94 aa8.22□□□□□ -1.09
CPSF2-202ENST00000553427 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
CPSF2-202ENST00000553427 SERP2Q8N6R1 65 aa8.2□□□□□ -1.1
CPSF2-202ENST00000553427 ACYP2P14621 99 aa8.17□□□□□ -1.1
CPSF2-202ENST00000553427 SNURFQ9Y675 71 aa8.16□□□□□ -1.1
CPSF2-202ENST00000553427 C20orf197Q8N268 126 aa8.13□□□□□ -1.11
CPSF2-202ENST00000553427 SPANXA2-OT1Q8N9U9 137 aa8.12□□□□□ -1.11
CPSF2-202ENST00000553427 MACF1Q9UPN3 7388 aaKnown RBP8.12□□□□□ -1.11
CPSF2-202ENST00000553427 KRTAP9-7A8MTY7 169 aa8.08□□□□□ -1.12
CPSF2-202ENST00000553427 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
CPSF2-202ENST00000553427 P0C880 135 aa8.05□□□□□ -1.12
CPSF2-202ENST00000553427 A6NN06 94 aa8.03□□□□□ -1.12
CPSF2-202ENST00000553427 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
CPSF2-202ENST00000553427 COX7CP15954 63 aa8□□□□□ -1.13
CPSF2-202ENST00000553427 KRTAP10-5P60370 271 aa8□□□□□ -1.13
CPSF2-202ENST00000553427 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
CPSF2-202ENST00000553427 R4GN34 69 aa7.99□□□□□ -1.13
CPSF2-202ENST00000553427 LOC100996750A0A140TA64 210 aa7.98□□□□□ -1.13
CPSF2-202ENST00000553427 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
CPSF2-202ENST00000553427 M0QZ58 72 aa7.92□□□□□ -1.14
CPSF2-202ENST00000553427 H7BZZ5 65 aa7.84□□□□□ -1.15
CPSF2-202ENST00000553427 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
CPSF2-202ENST00000553427 COA5Q86WW8 74 aa7.83□□□□□ -1.16
CPSF2-202ENST00000553427 KRTAP6-3Q3LI67 103 aa7.81□□□□□ -1.16
CPSF2-202ENST00000553427 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
CPSF2-202ENST00000553427 ANAPC13Q9BS18 74 aa7.8□□□□□ -1.16
CPSF2-202ENST00000553427 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
CPSF2-202ENST00000553427 MT1XP80297 61 aa7.76□□□□□ -1.17
CPSF2-202ENST00000553427 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
CPSF2-202ENST00000553427 CCDC179H3BU77 68 aa7.62□□□□□ -1.19
CPSF2-202ENST00000553427 SEC61GP60059 68 aa7.61□□□□□ -1.19
CPSF2-202ENST00000553427 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
CPSF2-202ENST00000553427 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
CPSF2-202ENST00000553427 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
CPSF2-202ENST00000553427 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
CPSF2-202ENST00000553427 NEBP20929 6669 aa7.56□□□□□ -1.2
CPSF2-202ENST00000553427 KRTAP5-9P26371 169 aa7.56□□□□□ -1.2
CPSF2-202ENST00000553427 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
CPSF2-202ENST00000553427 KMT2DO14686 5537 aa7.54□□□□□ -1.2
CPSF2-202ENST00000553427 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
CPSF2-202ENST00000553427 MDN1Q9NU22 5596 aa7.48□□□□□ -1.21
CPSF2-202ENST00000553427 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
CPSF2-202ENST00000553427 A0A1B0GU33 70 aa7.46□□□□□ -1.22
CPSF2-202ENST00000553427 A0A1B0GU69 56 aa7.41□□□□□ -1.22
CPSF2-202ENST00000553427 TMEM258P61165 79 aa7.41□□□□□ -1.22
CPSF2-202ENST00000553427 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
CPSF2-202ENST00000553427 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
CPSF2-202ENST00000553427 KRTAP10-7P60409 375 aaPredicted RBP7.38□□□□□ -1.23
CPSF2-202ENST00000553427 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
CPSF2-202ENST00000553427 KRTAP8-1Q8IUC2 63 aa7.37□□□□□ -1.23
CPSF2-202ENST00000553427 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
CPSF2-202ENST00000553427 A0A0D9SG42 100 aa7.35□□□□□ -1.23
CPSF2-202ENST00000553427 SPRR2FQ96RM1 72 aa7.32□□□□□ -1.24
CPSF2-202ENST00000553427 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
CPSF2-202ENST00000553427 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
CPSF2-202ENST00000553427 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
CPSF2-202ENST00000553427 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
CPSF2-202ENST00000553427 LCE3BQ5TA77 95 aa7.26□□□□□ -1.25
CPSF2-202ENST00000553427 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
CPSF2-202ENST00000553427 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
CPSF2-202ENST00000553427 SPRR2EP22531 72 aa7.17□□□□□ -1.26
CPSF2-202ENST00000553427 SPRR2BP35325 72 aa7.17□□□□□ -1.26
CPSF2-202ENST00000553427 SPRR2AP35326 72 aa7.17□□□□□ -1.26
CPSF2-202ENST00000553427 A8MU10 97 aa7.16□□□□□ -1.26
CPSF2-202ENST00000553427 LCE1AQ5T7P2 110 aa7.13□□□□□ -1.27
CPSF2-202ENST00000553427 KRTAP20-1Q3LI63 56 aa7.1□□□□□ -1.27
CPSF2-202ENST00000553427 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
CPSF2-202ENST00000553427 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
CPSF2-202ENST00000553427 UQCR11O14957 56 aa7.04□□□□□ -1.28
CPSF2-202ENST00000553427 KRTAP9-9Q9BYP9 154 aa7.03□□□□□ -1.28
CPSF2-202ENST00000553427 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
CPSF2-202ENST00000553427 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
CPSF2-202ENST00000553427 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
CPSF2-202ENST00000553427 V9GYY9 64 aa6.98□□□□□ -1.29
CPSF2-202ENST00000553427 KRTAP19-7Q3SYF9 63 aa6.94□□□□□ -1.3
CPSF2-202ENST00000553427 Q1T7F1 81 aa6.93□□□□□ -1.3
CPSF2-202ENST00000553427 SPRR2DP22532 72 aa6.92□□□□□ -1.3
CPSF2-202ENST00000553427 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
CPSF2-202ENST00000553427 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
CPSF2-202ENST00000553427 MT1EP04732 61 aa6.87□□□□□ -1.31
CPSF2-202ENST00000553427 TNP1P09430 55 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms