RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 A8MUU9 505 aa4.5□□□□□ -1.69
RAB5B-210ENST00000553116 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
RAB5B-210ENST00000553116 HRES1P13985 223 aa4.49□□□□□ -1.69
RAB5B-210ENST00000553116 CRIPTQ9P021 101 aa4.46□□□□□ -1.7
RAB5B-210ENST00000553116 ACYP2P14621 99 aa4.44□□□□□ -1.7
RAB5B-210ENST00000553116 XP32Q5T750 250 aa4.43□□□□□ -1.7
RAB5B-210ENST00000553116 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
RAB5B-210ENST00000553116 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
RAB5B-210ENST00000553116 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
RAB5B-210ENST00000553116 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
RAB5B-210ENST00000553116 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
RAB5B-210ENST00000553116 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.7
RAB5B-210ENST00000553116 HERC2O95714 4834 aa4.39□□□□□ -1.71
RAB5B-210ENST00000553116 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
RAB5B-210ENST00000553116 A0A1B0GU69 56 aa4.36□□□□□ -1.71
RAB5B-210ENST00000553116 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
RAB5B-210ENST00000553116 LPAP08519 4548 aa4.32□□□□□ -1.72
RAB5B-210ENST00000553116 LRP2P98164 4655 aa4.31□□□□□ -1.72
RAB5B-210ENST00000553116 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
RAB5B-210ENST00000553116 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
RAB5B-210ENST00000553116 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
RAB5B-210ENST00000553116 UQCR11O14957 56 aa4.25□□□□□ -1.73
RAB5B-210ENST00000553116 PCLOQ9Y6V0 5065 aa4.25□□□□□ -1.73
RAB5B-210ENST00000553116 ROMO1P60602 79 aa4.24□□□□□ -1.73
RAB5B-210ENST00000553116 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
RAB5B-210ENST00000553116 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
RAB5B-210ENST00000553116 P0C880 135 aa4.2□□□□□ -1.74
RAB5B-210ENST00000553116 S4R3F8 94 aa4.2□□□□□ -1.74
RAB5B-210ENST00000553116 HERC1Q15751 4861 aa4.18□□□□□ -1.74
RAB5B-210ENST00000553116 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
RAB5B-210ENST00000553116 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
RAB5B-210ENST00000553116 K7ERS5 55 aa4.17□□□□□ -1.74
RAB5B-210ENST00000553116 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
RAB5B-210ENST00000553116 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
RAB5B-210ENST00000553116 NDUFAF8A1L188 74 aa4.15□□□□□ -1.74
RAB5B-210ENST00000553116 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
RAB5B-210ENST00000553116 H0YAA0 97 aa4.1□□□□□ -1.75
RAB5B-210ENST00000553116 LCE2BO14633 110 aa4.1□□□□□ -1.75
RAB5B-210ENST00000553116 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
RAB5B-210ENST00000553116 MUC17Q685J3 4493 aa4.09□□□□□ -1.75
RAB5B-210ENST00000553116 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
RAB5B-210ENST00000553116 A0A1B0GU33 70 aa4.07□□□□□ -1.76
RAB5B-210ENST00000553116 A0A0D9SG42 100 aa4.06□□□□□ -1.76
RAB5B-210ENST00000553116 LCE2AQ5TA79 106 aaPredicted RBP4.06□□□□□ -1.76
RAB5B-210ENST00000553116 MUC2Q02817 5179 aa4.04□□□□□ -1.76
RAB5B-210ENST00000553116 KRTAP10-6P60371 365 aaPredicted RBP4□□□□□ -1.77
RAB5B-210ENST00000553116 KRTAP19-2Q3LHN2 52 aa3.96□□□□□ -1.78
RAB5B-210ENST00000553116 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
RAB5B-210ENST00000553116 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
RAB5B-210ENST00000553116 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
RAB5B-210ENST00000553116 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
RAB5B-210ENST00000553116 M0R2T5 61 aa3.91□□□□□ -1.78
RAB5B-210ENST00000553116 RNF213Q63HN8 5207 aa3.9□□□□□ -1.78
RAB5B-210ENST00000553116 R4GN34 69 aa3.9□□□□□ -1.79
RAB5B-210ENST00000553116 M0QZ58 72 aa3.9□□□□□ -1.79
RAB5B-210ENST00000553116 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
RAB5B-210ENST00000553116 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
RAB5B-210ENST00000553116 LORP23490 312 aaPredicted RBP3.83□□□□□ -1.8
RAB5B-210ENST00000553116 MT1HP80294 61 aa3.81□□□□□ -1.8
RAB5B-210ENST00000553116 KRTAP12-2P59991 146 aa3.79□□□□□ -1.8
RAB5B-210ENST00000553116 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
RAB5B-210ENST00000553116 KRTAP10-10P60014 251 aa3.72□□□□□ -1.81
RAB5B-210ENST00000553116 MT2AP02795 61 aa3.68□□□□□ -1.82
RAB5B-210ENST00000553116 MT1FP04733 61 aa3.67□□□□□ -1.82
RAB5B-210ENST00000553116 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
RAB5B-210ENST00000553116 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
RAB5B-210ENST00000553116 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
RAB5B-210ENST00000553116 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
RAB5B-210ENST00000553116 KRTAP9-3Q9BYQ3 159 aa3.52□□□□□ -1.85
RAB5B-210ENST00000553116 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
RAB5B-210ENST00000553116 TNP1P09430 55 aa3.48□□□□□ -1.85
RAB5B-210ENST00000553116 MT1BP07438 61 aa3.47□□□□□ -1.85
RAB5B-210ENST00000553116 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
RAB5B-210ENST00000553116 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
RAB5B-210ENST00000553116 MT1XP80297 61 aa3.39□□□□□ -1.87
RAB5B-210ENST00000553116 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
RAB5B-210ENST00000553116 USH2AO75445 5202 aa3.36□□□□□ -1.87
RAB5B-210ENST00000553116 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
RAB5B-210ENST00000553116 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
RAB5B-210ENST00000553116 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
RAB5B-210ENST00000553116 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
RAB5B-210ENST00000553116 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
RAB5B-210ENST00000553116 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
RAB5B-210ENST00000553116 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
RAB5B-210ENST00000553116 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
RAB5B-210ENST00000553116 KMT2DO14686 5537 aa3.16□□□□□ -1.9
RAB5B-210ENST00000553116 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
RAB5B-210ENST00000553116 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
RAB5B-210ENST00000553116 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
RAB5B-210ENST00000553116 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
RAB5B-210ENST00000553116 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
RAB5B-210ENST00000553116 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
RAB5B-210ENST00000553116 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
RAB5B-210ENST00000553116 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
RAB5B-210ENST00000553116 MT1EP04732 61 aa2.96□□□□□ -1.93
RAB5B-210ENST00000553116 INE1O15225 51 aa2.94□□□□□ -1.94
RAB5B-210ENST00000553116 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
RAB5B-210ENST00000553116 LCE5AQ5TCM9 118 aa2.94□□□□□ -1.94
RAB5B-210ENST00000553116 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
RAB5B-210ENST00000553116 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms