RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
BEST3-212ENST00000553096 ABCA13Q86UQ4 5058 aa4.08□□□□□ -1.76
BEST3-212ENST00000553096 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
BEST3-212ENST00000553096 SPINK1P00995 79 aa4.07□□□□□ -1.76
BEST3-212ENST00000553096 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
BEST3-212ENST00000553096 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
BEST3-212ENST00000553096 LINC00304Q8N9R0 145 aa4.05□□□□□ -1.76
BEST3-212ENST00000553096 SMR3BP02814 79 aaPredicted RBP4.05□□□□□ -1.76
BEST3-212ENST00000553096 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
BEST3-212ENST00000553096 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
BEST3-212ENST00000553096 TYMSOSQ8TAI1 123 aa4.03□□□□□ -1.76
BEST3-212ENST00000553096 Q8N1X5 172 aa4.02□□□□□ -1.77
BEST3-212ENST00000553096 TNXBP22105 4242 aa4.01□□□□□ -1.77
BEST3-212ENST00000553096 A0A1B0GU33 70 aa3.99□□□□□ -1.77
BEST3-212ENST00000553096 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
BEST3-212ENST00000553096 H0YAA0 97 aa3.98□□□□□ -1.77
BEST3-212ENST00000553096 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
BEST3-212ENST00000553096 Q5VSD8 79 aa3.98□□□□□ -1.77
BEST3-212ENST00000553096 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
BEST3-212ENST00000553096 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
BEST3-212ENST00000553096 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
BEST3-212ENST00000553096 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
BEST3-212ENST00000553096 FAT3Q8TDW7 4589 aa3.94□□□□□ -1.78
BEST3-212ENST00000553096 HERC1Q15751 4861 aa3.93□□□□□ -1.78
BEST3-212ENST00000553096 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.78
BEST3-212ENST00000553096 COX6B2Q6YFQ2 88 aa3.89□□□□□ -1.79
BEST3-212ENST00000553096 C9orf92A6NGG3 77 aa3.88□□□□□ -1.79
BEST3-212ENST00000553096 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
BEST3-212ENST00000553096 DMBT1Q9UGM3 2413 aaPredicted RBP3.87□□□□□ -1.79
BEST3-212ENST00000553096 KRTAP10-8P60410 259 aa3.84□□□□□ -1.79
BEST3-212ENST00000553096 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
BEST3-212ENST00000553096 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
BEST3-212ENST00000553096 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
BEST3-212ENST00000553096 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
BEST3-212ENST00000553096 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
BEST3-212ENST00000553096 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
BEST3-212ENST00000553096 S4R3F8 94 aa3.74□□□□□ -1.81
BEST3-212ENST00000553096 LPAP08519 4548 aa3.74□□□□□ -1.81
BEST3-212ENST00000553096 UBR4Q5T4S7 5183 aa3.74□□□□□ -1.81
BEST3-212ENST00000553096 KRTAP3-3Q9BYR6 98 aa3.74□□□□□ -1.81
BEST3-212ENST00000553096 XP32Q5T750 250 aa3.73□□□□□ -1.81
BEST3-212ENST00000553096 KRTAP3-2Q9BYR7 98 aa3.72□□□□□ -1.81
BEST3-212ENST00000553096 A0A0D9SG42 100 aa3.72□□□□□ -1.81
BEST3-212ENST00000553096 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
BEST3-212ENST00000553096 LRP2P98164 4655 aa3.7□□□□□ -1.82
BEST3-212ENST00000553096 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
BEST3-212ENST00000553096 M0QZ58 72 aa3.64□□□□□ -1.83
BEST3-212ENST00000553096 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
BEST3-212ENST00000553096 KRTAP12-1P59990 96 aa3.62□□□□□ -1.83
BEST3-212ENST00000553096 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
BEST3-212ENST00000553096 MUC2Q02817 5179 aa3.6□□□□□ -1.83
BEST3-212ENST00000553096 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
BEST3-212ENST00000553096 R4GN34 69 aa3.57□□□□□ -1.84
BEST3-212ENST00000553096 PLAC4Q8WY50 150 aa3.54□□□□□ -1.84
BEST3-212ENST00000553096 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
BEST3-212ENST00000553096 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
BEST3-212ENST00000553096 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.86
BEST3-212ENST00000553096 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
BEST3-212ENST00000553096 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
BEST3-212ENST00000553096 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
BEST3-212ENST00000553096 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
BEST3-212ENST00000553096 LORP23490 312 aaPredicted RBP3.35□□□□□ -1.87
BEST3-212ENST00000553096 INE1O15225 51 aa3.32□□□□□ -1.88
BEST3-212ENST00000553096 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
BEST3-212ENST00000553096 KRTAP4-8Q9BYQ9 185 aa3.3□□□□□ -1.88
BEST3-212ENST00000553096 LCE2BO14633 110 aa3.3□□□□□ -1.88
BEST3-212ENST00000553096 LCE2CQ5TA81 110 aa3.28□□□□□ -1.88
BEST3-212ENST00000553096 LCE2AQ5TA79 106 aaPredicted RBP3.26□□□□□ -1.89
BEST3-212ENST00000553096 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
BEST3-212ENST00000553096 TNP1P09430 55 aa3.23□□□□□ -1.89
BEST3-212ENST00000553096 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
BEST3-212ENST00000553096 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
BEST3-212ENST00000553096 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
BEST3-212ENST00000553096 KRTAP4-8A0A0G2JLE6 195 aa3.21□□□□□ -1.9
BEST3-212ENST00000553096 MT1HP80294 61 aa3.2□□□□□ -1.9
BEST3-212ENST00000553096 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
BEST3-212ENST00000553096 M0R2T5 61 aa3.18□□□□□ -1.9
BEST3-212ENST00000553096 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
BEST3-212ENST00000553096 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
BEST3-212ENST00000553096 MT1FP04733 61 aa3.1□□□□□ -1.91
BEST3-212ENST00000553096 MT2AP02795 61 aa3.09□□□□□ -1.91
BEST3-212ENST00000553096 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.92
BEST3-212ENST00000553096 LCE3BQ5TA77 95 aa3.07□□□□□ -1.92
BEST3-212ENST00000553096 USH2AO75445 5202 aa3.05□□□□□ -1.92
BEST3-212ENST00000553096 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
BEST3-212ENST00000553096 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
BEST3-212ENST00000553096 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
BEST3-212ENST00000553096 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
BEST3-212ENST00000553096 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
BEST3-212ENST00000553096 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
BEST3-212ENST00000553096 MT1BP07438 61 aa2.97□□□□□ -1.93
BEST3-212ENST00000553096 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
BEST3-212ENST00000553096 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
BEST3-212ENST00000553096 KRTAP9-3Q9BYQ3 159 aa2.96□□□□□ -1.93
BEST3-212ENST00000553096 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
BEST3-212ENST00000553096 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
BEST3-212ENST00000553096 MT1XP80297 61 aa2.92□□□□□ -1.94
BEST3-212ENST00000553096 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
BEST3-212ENST00000553096 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
BEST3-212ENST00000553096 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms