RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 COX6CP09669 75 aa3.36□□□□□ -1.87
PRIM1-208ENST00000552590 SCGB1C2P0DMR2 95 aa3.36□□□□□ -1.87
PRIM1-208ENST00000552590 IFITM1P13164 125 aa3.36□□□□□ -1.87
PRIM1-208ENST00000552590 PRO1854Q9UHT4 67 aa3.36□□□□□ -1.87
PRIM1-208ENST00000552590 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
PRIM1-208ENST00000552590 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
PRIM1-208ENST00000552590 H3BMG7 143 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 K7ERJ3 54 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 NDUFV3P56181 108 aaKnown RBP3.35□□□□□ -1.87
PRIM1-208ENST00000552590 A0A087WSZ3 146 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 PSMB2P49721 201 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 ATXN8Q156A1 80 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 LINC00575Q6W349 94 aa3.35□□□□□ -1.87
PRIM1-208ENST00000552590 NAA38Q9BRA0 125 aaKnown RBP3.35□□□□□ -1.87
PRIM1-208ENST00000552590 hADV29S1A0JD25 119 aa3.33□□□□□ -1.88
PRIM1-208ENST00000552590 KLKP1Q107X0 134 aa3.33□□□□□ -1.88
PRIM1-208ENST00000552590 MUSTN1Q8IVN3 82 aa3.33□□□□□ -1.88
PRIM1-208ENST00000552590 PPDPFLQ8WWR9 84 aa3.33□□□□□ -1.88
PRIM1-208ENST00000552590 ETDBQ3ZM63 59 aa3.32□□□□□ -1.88
PRIM1-208ENST00000552590 TEN1Q86WV5 123 aa3.32□□□□□ -1.88
PRIM1-208ENST00000552590 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
PRIM1-208ENST00000552590 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
PRIM1-208ENST00000552590 H3BT86 120 aa3.3□□□□□ -1.88
PRIM1-208ENST00000552590 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
PRIM1-208ENST00000552590 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
PRIM1-208ENST00000552590 A0A1B0GV72 72 aa3.29□□□□□ -1.88
PRIM1-208ENST00000552590 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
PRIM1-208ENST00000552590 IGHV6-1A0A0B4J1U7 121 aa3.28□□□□□ -1.88
PRIM1-208ENST00000552590 C9JAW5 83 aa3.28□□□□□ -1.88
PRIM1-208ENST00000552590 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.28□□□□□ -1.88
PRIM1-208ENST00000552590 ACYP1P07311 99 aa3.28□□□□□ -1.88
PRIM1-208ENST00000552590 SNCGO76070 127 aa3.27□□□□□ -1.89
PRIM1-208ENST00000552590 LCA10Q71F78 164 aa3.27□□□□□ -1.89
PRIM1-208ENST00000552590 FAM240AA0A1B0GVK7 77 aa3.26□□□□□ -1.89
PRIM1-208ENST00000552590 H0YGX0 51 aa3.26□□□□□ -1.89
PRIM1-208ENST00000552590 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
PRIM1-208ENST00000552590 TRACP01848 142 aa3.25□□□□□ -1.89
PRIM1-208ENST00000552590 DNAL4O96015 105 aa3.24□□□□□ -1.89
PRIM1-208ENST00000552590 PRR15Q8IV56 129 aa3.24□□□□□ -1.89
PRIM1-208ENST00000552590 A0A1B0GX51 115 aa3.23□□□□□ -1.89
PRIM1-208ENST00000552590 H3BQ85 93 aa3.23□□□□□ -1.89
PRIM1-208ENST00000552590 A8MU10 97 aa3.22□□□□□ -1.89
PRIM1-208ENST00000552590 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
PRIM1-208ENST00000552590 BAALC-AS2P0C853 105 aa3.21□□□□□ -1.9
PRIM1-208ENST00000552590 A0A1B0GVX0 72 aa3.2□□□□□ -1.9
PRIM1-208ENST00000552590 MT-ATP8P03928 68 aa3.2□□□□□ -1.9
PRIM1-208ENST00000552590 CSAG1Q6PB30 78 aa3.2□□□□□ -1.9
PRIM1-208ENST00000552590 LINC00643Q86TS7 51 aa3.2□□□□□ -1.9
PRIM1-208ENST00000552590 ANAPC13Q9BS18 74 aa3.2□□□□□ -1.9
PRIM1-208ENST00000552590 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
PRIM1-208ENST00000552590 JMJD7-PLA2G4BH0Y9G9 81 aa3.19□□□□□ -1.9
PRIM1-208ENST00000552590 IGKV3D-7A0A0C4DH55 119 aa3.18□□□□□ -1.9
PRIM1-208ENST00000552590 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
PRIM1-208ENST00000552590 TMEM256-PLSCR3K7ERE1 68 aa3.18□□□□□ -1.9
PRIM1-208ENST00000552590 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
PRIM1-208ENST00000552590 CYSTM1Q9H1C7 97 aa3.18□□□□□ -1.9
PRIM1-208ENST00000552590 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
PRIM1-208ENST00000552590 DSCR8Q96T75 97 aa3.17□□□□□ -1.9
PRIM1-208ENST00000552590 TRBV7-4A0A0J9YYF1 115 aa3.16□□□□□ -1.9
PRIM1-208ENST00000552590 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
PRIM1-208ENST00000552590 PDE6GP18545 87 aa3.16□□□□□ -1.9
PRIM1-208ENST00000552590 ATP5EP2Q5VTU8 51 aa3.15□□□□□ -1.91
PRIM1-208ENST00000552590 S4R3F8 94 aa3.14□□□□□ -1.91
PRIM1-208ENST00000552590 ATOX1O00244 68 aa3.13□□□□□ -1.91
PRIM1-208ENST00000552590 CCKP06307 115 aa3.13□□□□□ -1.91
PRIM1-208ENST00000552590 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
PRIM1-208ENST00000552590 CXCL6P80162 114 aa3.12□□□□□ -1.91
PRIM1-208ENST00000552590 UBL5Q9BZL1 73 aa3.12□□□□□ -1.91
PRIM1-208ENST00000552590 UQCRQO14949 82 aa3.11□□□□□ -1.91
PRIM1-208ENST00000552590 C4orf26Q17RF5 130 aa3.11□□□□□ -1.91
PRIM1-208ENST00000552590 SEC61GP60059 68 aa3.1□□□□□ -1.91
PRIM1-208ENST00000552590 C14orf132Q9NPU4 83 aa3.1□□□□□ -1.91
PRIM1-208ENST00000552590 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.91
PRIM1-208ENST00000552590 SMIM20Q8N5G0 67 aa3.09□□□□□ -1.91
PRIM1-208ENST00000552590 C8orf17Q9NRJ1 99 aa3.09□□□□□ -1.91
PRIM1-208ENST00000552590 H0YAA0 97 aa3.09□□□□□ -1.92
PRIM1-208ENST00000552590 A0A1B0GW54 56 aa3.08□□□□□ -1.92
PRIM1-208ENST00000552590 COX7CP15954 63 aa3.08□□□□□ -1.92
PRIM1-208ENST00000552590 A8MUN3 132 aa3.07□□□□□ -1.92
PRIM1-208ENST00000552590 MT1EP04732 61 aa3.07□□□□□ -1.92
PRIM1-208ENST00000552590 HIST1H4AP62805 103 aaKnown RBP3.07□□□□□ -1.92
PRIM1-208ENST00000552590 Q6ZQT0 140 aa3.07□□□□□ -1.92
PRIM1-208ENST00000552590 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
PRIM1-208ENST00000552590 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
PRIM1-208ENST00000552590 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
PRIM1-208ENST00000552590 J3KT08 172 aa3.05□□□□□ -1.92
PRIM1-208ENST00000552590 NDUFB1O75438 58 aa3.05□□□□□ -1.92
PRIM1-208ENST00000552590 TMEM258P61165 79 aa3.03□□□□□ -1.93
PRIM1-208ENST00000552590 RPS28P62857 69 aaKnown RBP3.03□□□□□ -1.93
PRIM1-208ENST00000552590 Q5W150 140 aa3.03□□□□□ -1.93
PRIM1-208ENST00000552590 C7orf65Q6ZTY9 151 aa3.03□□□□□ -1.93
PRIM1-208ENST00000552590 TRAV7A0A075B6U4 112 aa3.02□□□□□ -1.93
PRIM1-208ENST00000552590 NDUFS5O43920 106 aa3.02□□□□□ -1.93
PRIM1-208ENST00000552590 NREPQ16612 68 aa3.02□□□□□ -1.93
PRIM1-208ENST00000552590 NDUFC1O43677 76 aa3.01□□□□□ -1.93
PRIM1-208ENST00000552590 MT1GP13640 62 aa3.01□□□□□ -1.93
PRIM1-208ENST00000552590 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
PRIM1-208ENST00000552590 MMP24-AS1A0A0U1RRL7 71 aa3□□□□□ -1.93
PRIM1-208ENST00000552590 A0A087WVE0 104 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms