RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 A0A1B0GV90 55 aa2.36□□□□□ -2.03
HOXB3-213ENST00000552000 A6NED7 52 aa2.36□□□□□ -2.03
HOXB3-213ENST00000552000 LCA10Q71F78 164 aa2.36□□□□□ -2.03
HOXB3-213ENST00000552000 ATOH7Q8N100 152 aa2.36□□□□□ -2.03
HOXB3-213ENST00000552000 RAB37Q96AX2 223 aa2.36□□□□□ -2.03
HOXB3-213ENST00000552000 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
HOXB3-213ENST00000552000 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
HOXB3-213ENST00000552000 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.03
HOXB3-213ENST00000552000 SNCGO76070 127 aa2.34□□□□□ -2.03
HOXB3-213ENST00000552000 KRTDAPP60985 99 aa2.34□□□□□ -2.03
HOXB3-213ENST00000552000 TRACP01848 142 aa2.33□□□□□ -2.04
HOXB3-213ENST00000552000 PRR15Q8IV56 129 aa2.33□□□□□ -2.04
HOXB3-213ENST00000552000 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
HOXB3-213ENST00000552000 A0A0B4J2C4 111 aa2.32□□□□□ -2.04
HOXB3-213ENST00000552000 H0YGX0 51 aa2.32□□□□□ -2.04
HOXB3-213ENST00000552000 TAX1BP3O14907 124 aa2.32□□□□□ -2.04
HOXB3-213ENST00000552000 DLEU1O43261 78 aa2.32□□□□□ -2.04
HOXB3-213ENST00000552000 CCKP06307 115 aa2.32□□□□□ -2.04
HOXB3-213ENST00000552000 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
HOXB3-213ENST00000552000 C9JAW5 83 aa2.31□□□□□ -2.04
HOXB3-213ENST00000552000 HIST1H2BKO60814 126 aa2.31□□□□□ -2.04
HOXB3-213ENST00000552000 HIST1H2BJP06899 126 aa2.31□□□□□ -2.04
HOXB3-213ENST00000552000 HIST1H4AP62805 103 aaKnown RBP2.31□□□□□ -2.04
HOXB3-213ENST00000552000 LINC01554Q52M75 96 aa2.31□□□□□ -2.04
HOXB3-213ENST00000552000 H3BQ85 93 aa2.3□□□□□ -2.04
HOXB3-213ENST00000552000 TMEM256-PLSCR3K7ERE1 68 aa2.29□□□□□ -2.04
HOXB3-213ENST00000552000 NDUFB1O75438 58 aa2.29□□□□□ -2.04
HOXB3-213ENST00000552000 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
HOXB3-213ENST00000552000 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
HOXB3-213ENST00000552000 KLKP1Q107X0 134 aa2.28□□□□□ -2.04
HOXB3-213ENST00000552000 C2orf91Q6ZV80 131 aa2.28□□□□□ -2.04
HOXB3-213ENST00000552000 RBM3P98179 157 aaKnown RBP2.27□□□□□ -2.05
HOXB3-213ENST00000552000 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
HOXB3-213ENST00000552000 ORMDL1Q9P0S3 153 aa2.27□□□□□ -2.05
HOXB3-213ENST00000552000 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
HOXB3-213ENST00000552000 DNAL4O96015 105 aa2.26□□□□□ -2.05
HOXB3-213ENST00000552000 C7orf65Q6ZTY9 151 aa2.26□□□□□ -2.05
HOXB3-213ENST00000552000 HIST3H2BBQ8N257 126 aa2.26□□□□□ -2.05
HOXB3-213ENST00000552000 S4R3F8 94 aa2.26□□□□□ -2.05
HOXB3-213ENST00000552000 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
HOXB3-213ENST00000552000 MT1XP80297 61 aa2.24□□□□□ -2.05
HOXB3-213ENST00000552000 C1orf64Q8NEQ6 169 aa2.24□□□□□ -2.05
HOXB3-213ENST00000552000 TMEM254Q8TBM7 123 aa2.24□□□□□ -2.05
HOXB3-213ENST00000552000 HIST1H2BLQ99880 126 aa2.24□□□□□ -2.05
HOXB3-213ENST00000552000 MRPL34Q9BQ48 92 aaKnown RBP2.24□□□□□ -2.05
HOXB3-213ENST00000552000 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
HOXB3-213ENST00000552000 H3BT86 120 aa2.23□□□□□ -2.05
HOXB3-213ENST00000552000 K7ERU9 68 aa2.23□□□□□ -2.05
HOXB3-213ENST00000552000 Q6ZQT0 140 aa2.23□□□□□ -2.05
HOXB3-213ENST00000552000 MMP24-AS1A0A0U1RRL7 71 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 A0A1B0GU33 70 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 H3BPC8 53 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 K7ERJ3 54 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
HOXB3-213ENST00000552000 BRK1Q8WUW1 75 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 CRIPTQ9P021 101 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 PRO1854Q9UHT4 67 aa2.22□□□□□ -2.05
HOXB3-213ENST00000552000 J3QR89 54 aa2.21□□□□□ -2.06
HOXB3-213ENST00000552000 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
HOXB3-213ENST00000552000 hDV103S1A0JD37 113 aa2.2□□□□□ -2.06
HOXB3-213ENST00000552000 COX8AP10176 69 aa2.2□□□□□ -2.06
HOXB3-213ENST00000552000 TRAV7A0A075B6U4 112 aa2.19□□□□□ -2.06
HOXB3-213ENST00000552000 K7EQZ3 153 aa2.19□□□□□ -2.06
HOXB3-213ENST00000552000 SMIM6P0DI80 62 aa2.19□□□□□ -2.06
HOXB3-213ENST00000552000 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
HOXB3-213ENST00000552000 FXYD2P54710 66 aa2.18□□□□□ -2.06
HOXB3-213ENST00000552000 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
HOXB3-213ENST00000552000 C14orf144Q96I85 54 aa2.18□□□□□ -2.06
HOXB3-213ENST00000552000 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
HOXB3-213ENST00000552000 HIGD1BQ9P298 99 aa2.17□□□□□ -2.06
HOXB3-213ENST00000552000 COX6CP09669 75 aa2.16□□□□□ -2.06
HOXB3-213ENST00000552000 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
HOXB3-213ENST00000552000 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
HOXB3-213ENST00000552000 Q8N9L7 120 aa2.16□□□□□ -2.06
HOXB3-213ENST00000552000 HCG22E2RYF7 251 aa2.15□□□□□ -2.07
HOXB3-213ENST00000552000 UQCRQO14949 82 aa2.15□□□□□ -2.07
HOXB3-213ENST00000552000 BAALC-AS2P0C853 105 aa2.15□□□□□ -2.07
HOXB3-213ENST00000552000 NREPQ16612 68 aa2.15□□□□□ -2.07
HOXB3-213ENST00000552000 NAA38Q9BRA0 125 aaKnown RBP2.14□□□□□ -2.07
HOXB3-213ENST00000552000 R4GN34 69 aa2.14□□□□□ -2.07
HOXB3-213ENST00000552000 A0A087WVE0 104 aa2.13□□□□□ -2.07
HOXB3-213ENST00000552000 LOC110117498A0A087WWA1 95 aa2.13□□□□□ -2.07
HOXB3-213ENST00000552000 PDE6GP18545 87 aa2.13□□□□□ -2.07
HOXB3-213ENST00000552000 SPATA45Q537H7 98 aa2.12□□□□□ -2.07
HOXB3-213ENST00000552000 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
HOXB3-213ENST00000552000 CASC2Q6XLA1 102 aa2.12□□□□□ -2.07
HOXB3-213ENST00000552000 C14orf132Q9NPU4 83 aa2.11□□□□□ -2.07
HOXB3-213ENST00000552000 JMJD7-PLA2G4BH0Y9G9 81 aa2.1□□□□□ -2.07
HOXB3-213ENST00000552000 MT4P47944 62 aa2.1□□□□□ -2.07
HOXB3-213ENST00000552000 H0YAA0 97 aa2.08□□□□□ -2.08
HOXB3-213ENST00000552000 ROMO1P60602 79 aa2.08□□□□□ -2.08
HOXB3-213ENST00000552000 HSD52Q0P140 79 aa2.08□□□□□ -2.08
HOXB3-213ENST00000552000 VAMP8Q9BV40 100 aa2.08□□□□□ -2.08
HOXB3-213ENST00000552000 CCDC179H3BU77 68 aa2.07□□□□□ -2.08
HOXB3-213ENST00000552000 NDUFC1O43677 76 aa2.06□□□□□ -2.08
HOXB3-213ENST00000552000 TMEM258P61165 79 aa2.06□□□□□ -2.08
HOXB3-213ENST00000552000 ATXN8Q156A1 80 aa2.06□□□□□ -2.08
HOXB3-213ENST00000552000 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
HOXB3-213ENST00000552000 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms