RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 S4R3F8 94 aa5.92□□□□□ -1.46
NPAS3-209ENST00000551008 MT1BP07438 61 aa5.91□□□□□ -1.46
NPAS3-209ENST00000551008 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
NPAS3-209ENST00000551008 A0A087WVE0 104 aa5.88□□□□□ -1.47
NPAS3-209ENST00000551008 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
NPAS3-209ENST00000551008 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
NPAS3-209ENST00000551008 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
NPAS3-209ENST00000551008 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
NPAS3-209ENST00000551008 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
NPAS3-209ENST00000551008 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
NPAS3-209ENST00000551008 TRAV22A0A0B4J277 110 aa5.82□□□□□ -1.48
NPAS3-209ENST00000551008 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
NPAS3-209ENST00000551008 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
NPAS3-209ENST00000551008 ACYP1P07311 99 aa5.79□□□□□ -1.48
NPAS3-209ENST00000551008 KLKP1Q107X0 134 aa5.79□□□□□ -1.48
NPAS3-209ENST00000551008 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
NPAS3-209ENST00000551008 Q5VV11 94 aa5.78□□□□□ -1.48
NPAS3-209ENST00000551008 ATP5EP2Q5VTU8 51 aa5.77□□□□□ -1.49
NPAS3-209ENST00000551008 A6NN06 94 aa5.74□□□□□ -1.49
NPAS3-209ENST00000551008 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
NPAS3-209ENST00000551008 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
NPAS3-209ENST00000551008 H0Y9P7 68 aa5.73□□□□□ -1.49
NPAS3-209ENST00000551008 UQCRQO14949 82 aa5.73□□□□□ -1.49
NPAS3-209ENST00000551008 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
NPAS3-209ENST00000551008 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
NPAS3-209ENST00000551008 ATOX1O00244 68 aa5.67□□□□□ -1.5
NPAS3-209ENST00000551008 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
NPAS3-209ENST00000551008 A0A1B0GV90 55 aa5.65□□□□□ -1.5
NPAS3-209ENST00000551008 H0YAA0 97 aa5.65□□□□□ -1.5
NPAS3-209ENST00000551008 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
NPAS3-209ENST00000551008 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
NPAS3-209ENST00000551008 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
NPAS3-209ENST00000551008 NDUFC1O43677 76 aa5.62□□□□□ -1.51
NPAS3-209ENST00000551008 A8MUN3 132 aa5.6□□□□□ -1.51
NPAS3-209ENST00000551008 NEBP20929 6669 aa5.59□□□□□ -1.52
NPAS3-209ENST00000551008 ADM2Q7Z4H4 148 aa5.58□□□□□ -1.52
NPAS3-209ENST00000551008 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
NPAS3-209ENST00000551008 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
NPAS3-209ENST00000551008 MP68P56378 58 aa5.53□□□□□ -1.52
NPAS3-209ENST00000551008 PCP4P48539 62 aa5.52□□□□□ -1.53
NPAS3-209ENST00000551008 MT1XP80297 61 aa5.52□□□□□ -1.53
NPAS3-209ENST00000551008 P0C880 135 aa5.51□□□□□ -1.53
NPAS3-209ENST00000551008 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
NPAS3-209ENST00000551008 H3BPC8 53 aa5.47□□□□□ -1.53
NPAS3-209ENST00000551008 KMT2DO14686 5537 aa5.47□□□□□ -1.53
NPAS3-209ENST00000551008 J3QR89 54 aa5.41□□□□□ -1.54
NPAS3-209ENST00000551008 R4GN34 69 aa5.39□□□□□ -1.55
NPAS3-209ENST00000551008 M0QZ58 72 aa5.38□□□□□ -1.55
NPAS3-209ENST00000551008 SCGB1A1P11684 91 aa5.38□□□□□ -1.55
NPAS3-209ENST00000551008 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
NPAS3-209ENST00000551008 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
NPAS3-209ENST00000551008 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
NPAS3-209ENST00000551008 MT-ATP8P03928 68 aa5.37□□□□□ -1.55
NPAS3-209ENST00000551008 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
NPAS3-209ENST00000551008 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
NPAS3-209ENST00000551008 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
NPAS3-209ENST00000551008 C20orf197Q8N268 126 aa5.35□□□□□ -1.55
NPAS3-209ENST00000551008 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
NPAS3-209ENST00000551008 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
NPAS3-209ENST00000551008 LINC01554Q52M75 96 aa5.29□□□□□ -1.56
NPAS3-209ENST00000551008 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
NPAS3-209ENST00000551008 ACYP2P14621 99 aa5.27□□□□□ -1.57
NPAS3-209ENST00000551008 SPRR2EP22531 72 aa5.27□□□□□ -1.57
NPAS3-209ENST00000551008 SPRR2BP35325 72 aa5.27□□□□□ -1.57
NPAS3-209ENST00000551008 SPRR2AP35326 72 aa5.27□□□□□ -1.57
NPAS3-209ENST00000551008 K7ERU9 68 aa5.26□□□□□ -1.57
NPAS3-209ENST00000551008 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
NPAS3-209ENST00000551008 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
NPAS3-209ENST00000551008 SMIM20Q8N5G0 67 aa5.23□□□□□ -1.57
NPAS3-209ENST00000551008 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
NPAS3-209ENST00000551008 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
NPAS3-209ENST00000551008 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
NPAS3-209ENST00000551008 SNURFQ9Y675 71 aa5.22□□□□□ -1.57
NPAS3-209ENST00000551008 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
NPAS3-209ENST00000551008 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
NPAS3-209ENST00000551008 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
NPAS3-209ENST00000551008 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
NPAS3-209ENST00000551008 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
NPAS3-209ENST00000551008 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
NPAS3-209ENST00000551008 SPRR2DP22532 72 aa5.08□□□□□ -1.6
NPAS3-209ENST00000551008 KRTAP2-2Q9BYT5 123 aa5.05□□□□□ -1.6
NPAS3-209ENST00000551008 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
NPAS3-209ENST00000551008 COA5Q86WW8 74 aa5.02□□□□□ -1.61
NPAS3-209ENST00000551008 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
NPAS3-209ENST00000551008 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
NPAS3-209ENST00000551008 COX7CP15954 63 aa4.93□□□□□ -1.62
NPAS3-209ENST00000551008 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
NPAS3-209ENST00000551008 H7BZZ5 65 aa4.91□□□□□ -1.62
NPAS3-209ENST00000551008 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
NPAS3-209ENST00000551008 ANAPC13Q9BS18 74 aa4.9□□□□□ -1.63
NPAS3-209ENST00000551008 A0A0D9SG42 100 aa4.89□□□□□ -1.63
NPAS3-209ENST00000551008 MT1EP04732 61 aa4.88□□□□□ -1.63
NPAS3-209ENST00000551008 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
NPAS3-209ENST00000551008 A0A1B0GU33 70 aa4.83□□□□□ -1.64
NPAS3-209ENST00000551008 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
NPAS3-209ENST00000551008 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
NPAS3-209ENST00000551008 SEC61GP60059 68 aa4.81□□□□□ -1.64
NPAS3-209ENST00000551008 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
NPAS3-209ENST00000551008 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
NPAS3-209ENST00000551008 KRTAP19-5Q3LI72 72 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms